Peromyscus leucopus (white-footed mouse): 114703434
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Entry
114703434 CDS
T07241
Symbol
Ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03420
Nucleotide excision repair
pleu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114703434 (Ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
114703434 (Ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pleu04121
]
114703434 (Ercc8)
03400 DNA repair and recombination proteins [BR:
pleu03400
]
114703434 (Ercc8)
Ubiquitin system [BR:
pleu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114703434 (Ercc8)
DNA repair and recombination proteins [BR:
pleu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
114703434 (Ercc8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_RIG_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR11_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
114703434
NCBI-ProteinID:
XP_028740118
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Position
11:complement(40560243..40599853)
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AA seq
397 aa
AA seq
DB search
MLSFLYARQSGLEDPLRLRRAQSTRRVLSLELNKDRDVERIHCSGVNTLDIEPVEGRYML
SGGSDGVIALYDLENGSRQPYYTCKAVCTVGRSHPDVHKYSVETVQWYPHDTGIFTSSSF
DKTLKVWDTNTLQAADVYNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRHDYILATASADSRVKLWDVRRASGCLLTLDQHNGKKSQAAESA
NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGKNTLVNYGKVCNDSRKGLKFTVS
CGCSSELVFVPYGSTIAVYAVYSGEQLTLLKGHYKSVDCCVFQPHFQELYSGSRDCNILA
WVPSLYEPVPDDDDEAKTKSRLNPAFEDAWSSSDEEG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctttttgtacgctcggcagtcggggttggaggaccctcttcgcttgcgtaga
gcgcagtccacacggagggtcctgtcactggagctgaacaaagacagagatgttgaaaga
atccactgcagtggagttaacacccttgatattgagcctgttgaaggaagatacatgctc
tcgggtggctcagatggtgtgattgcactctatgaccttgagaacggcagcagacagccc
tattacacatgtaaagcagtgtgtaccgttggcagaagccatcccgatgttcacaaatac
agcgtggaaacggttcagtggtatccccatgatacaggcatattcacatccagctcattc
gataaaactctgaaagtgtgggataccaatactttgcaggctgcagatgtgtataatttt
gaggaaacagtttatagtcatcatatgtcaccagcagccaccaagcactgtctcgtagca
gttggtactagaggacccaaagtacaactttgtgacttaaagtctggatcctgttctcac
attctacagggtcacagacaggaaatattggcagtttcctggtcaccacgccatgactat
atcttggcaacagccagtgccgacagtagagtaaaattatgggatgtgagaagagcatca
ggatgtttgctcactcttgatcagcataatgggaagaagtcacaagctgctgaatcagcc
aacactgctcacaatgggaaagttaatggcttgtgttttacaagtgatgggcttcacctg
ctcactgttggcacagataaccgaatgaggctctggaacagctccaatgggaagaacaca
ctggtgaactatggcaaagtttgtaatgacagtaggaaaggactgaaattcaccgtctcc
tgtggctgcagctcagaattggtttttgttccatacggtagcaccattgctgtttatgca
gtttactcaggagagcagctaactctgctgaagggccattataaaagtgtcgactgctgt
gtgttccagcctcacttccaggaactgtacagcggtagcagagactgcaatattcttgct
tgggtaccatctttatacgaaccagttcctgacgacgatgatgaggctaaaactaaatct
cggttgaatccagcgtttgaggatgcctggagcagcagtgatgaggaagggtga
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