Peromyscus leucopus (white-footed mouse): 114703702
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Entry
114703702 CDS
T07241
Symbol
Sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114703702 (Sox6)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114703702 (Sox6)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
114703702
NCBI-ProteinID:
XP_028740389
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Position
1:88560531..89121027
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AA seq
855 aa
AA seq
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MPSSSEVLADVARESRIEEWRSSHFVRMSSKQATSPFACTADGEETMTQDLTSREKEEGS
DQHAASHLPLHPIMHNKPHSEELPTLVNTIQQDADWDSVLSSQQRMESENNKLCSLYSFR
NTSTSPHKPDEGSREREIMNSVTFGTPERRKGSLADVVDTLKQKKLEEMTRSEQEDSSCM
EKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQK
KLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIF
PHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSH
PQINPRLKGISDRFGRNLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPP
NTAGTVSPTGIKNEKRGTSPVTQVKDETTAQPLNLSSRPKTAEPVKSPTSPTQSLFPASK
TSPVNLPNKSSIPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQR
EQQQQPHGVDGKLSSMNNMGLSNCRNEKERTRFENLGPQLTGKSGEDGKLGPGVIDLTRP
EDAEGSKAVNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAK
DERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPR
PKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTT
PSPQMTSDCSSTSASPEPSLPVIQSTYGMKMDGASLAGNDMINGEDEMEAYDDYEDDPKS
DYSSENEAPEPVSAN
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgagttctgaagttctggctgatgtggcaagagagagccggattgaagagtgg
aggagcagccactttgtaagaatgtcttccaagcaagccacctctccatttgcctgtaca
gccgatggagaggaaacaatgacccaggatttgacctcaagggaaaaggaagagggcagt
gatcaacatgcggcctcccatctgcctctgcaccccataatgcacaacaaacctcactcc
gaggagctaccaacgcttgtcaataccattcaacaagatgctgactgggacagcgttctg
tcatctcagcaaagaatggagtcagagaataataagttatgttccctatattccttccga
aatacgtctacctcaccacataagcctgacgaagggagtcgggagcgcgagataatgaac
agtgttacttttggaaccccggaacgccgcaaagggagccttgcggatgtggtggatacg
ctgaagcagaagaagctagaggagatgactcggtccgaacaagaggattcctcctgcatg
gaaaaactactttcaaaagattggaaggaaaaaatggaaagactaaataccagtgaactt
cttggagaaatcaaaggtacacccgagagcctagcggagaaggaacgacaactctccacc
atgattacccagctcatcagcttgcgggagcagctcctggcagcgcacgatgaacagaaa
aagctggcagcctcacagatcgagaaacagcggcagcaaatggaccttgctcgccaacaa
caagaacagatcgcaagacaacagcagcaacttcttcagcagcagcacaagattaatctc
ctgcagcaacagatccagcaggttcaggggcacatgcctccgctcatgatcccaattttt
ccacatgaccagcggaccctggcagcagctgctgccgcccaacagggattcctcttcccc
cctggaataacatacaagccaggtgataactaccccgtacagttcattccgtcaacaatg
gcagctgctgctgcttctggactcagccctttacagctccagaagggtcatgtctcccac
ccacaaattaacccaaggctaaagggcataagtgaccgttttggcaggaatttggacacc
tttgaacatggtggtggccactcttacaaccacaaacagattgagcagctctatgccgct
cagctggccagcatgcaggtgtcacctggagcaaagatgccatcaactccacagccacca
aacacagcagggacggtctcacctactgggataaaaaatgaaaagagagggaccagccct
gtaactcaagttaaggatgaaacaacagcccagccgctgaatctctcatccaggcccaag
acagcagagcctgtgaagtccccaacatctcccacccagagcctcttcccagccagcaaa
accagccctgtcaacctgccaaacaagagcagcatccccagccccattggaggaagcctg
gggagaggatcctctttagatatcctgtccagtctcaactctcctgccctgtttggggac
caggacacagtgatgaaagccattcaggaggctcggaagatgcgagaacagatccagcgg
gagcagcaacagcagccacacggggttgatgggaaactgtcctccatgaacaacatgggg
ctgagcaactgcaggaatgagaaggaaagaactcgttttgagaacttgggaccccagtta
acagggaagtcaggtgaagatgggaaactgggcccaggcgtcatcgatcttactcggcct
gaagatgcagagggaagcaaagcagtgaatggctctgcagctaaactacagcagtattat
tgttggccaacaggaggcgccactgtggctgaagcacgcgtctacagggatgcccgcggc
cgtgccagcagcgagcctcacatcaagcgaccaatgaatgcgttcatggtttgggcgaag
gacgaaaggaggaaaattcttcaggctttccctgacatgcataactccaacattagcaaa
atcttaggatctcgctggaaatccatgtccaaccaggagaagcaaccttactatgaagaa
caggcccggctaagcaaaatccacctagagaagtacccaaattacaagtacaaaccccgg
ccgaagcgcacatgcatcgtggatggcaagaagctccggattggggagtacaagcaactg
atgcgctcccggaggcaggagatgcgacagttcttcactgtggggcaacagcctcagatt
cccatcaccacaggaacaggtgttgtgtatcctggtgctattactatggcaacgaccaca
ccatcacctcagatgacatctgactgctctagcacctctgccagcccagagcccagcctc
cctgtcatccagagcacgtatggtatgaagatggacggcgcaagcctggctgggaacgac
atgattaatggagaggatgaaatggaagcctatgacgactacgaagatgatcccaaatca
gactatagcagcgaaaatgaggccccagagcctgtcagtgccaactga
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