Peromyscus leucopus (white-footed mouse): 114704053
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Entry
114704053 CDS
T07241
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013
Nucleocytoplasmic transport
pleu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114704053 (Pnn)
03015 mRNA surveillance pathway
114704053 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114704053 (Pnn)
03041 Spliceosome [BR:
pleu03041
]
114704053 (Pnn)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114704053 (Pnn)
Spliceosome [BR:
pleu03041
]
Complex C
Other components
EJC/TREX
114704053 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
114704053
NCBI-ProteinID:
XP_028740946
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Position
14:27135686..27144213
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AA seq
720 aa
AA seq
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MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEVEEAGEEEEKEAGVVHSDAEKEQEEEEHKQ
EMEAKMEEETEVREGEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESIEPSENE
TSKELEPEMEFDVEPDKESKSLSPGKENINSLEVEKESEEKEDKEPEPQPEPMAQPQPPP
QPLPQSQPHSQPQPVLQSQLLAQPETVPLAAVLQPPPQVVQEQGNLLPERKEFPLESVKL
PDVPVEPVLAVHSENKSKNKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSSSSSSGSSSS
SGSSSSRSSSSSSSSSSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDT
AGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcggtgagaactttgcaggagcagctggagaaggccaaagagagcctcaag
aacgtagacgagaatatccgcaagctcaccggccgggacccaaatgatgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctaaggcgtggattctcagatagtggaggaggacccccagccaaacagagagacctggaa
ggggcagtcagtaggctgggtggagagcggcggacaagaagagaatcacgccaggaaagc
gacccggaagatgatgatgttaaaaagccagcacttcagtcttctgttgtagctacctcc
aaagagcgcactcgcagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccggcgaatatttggcttgttgatgggcacccttcaaaaatttaaacaagaatct
actgttgcgactgaaaggcaaaagagacgccaagaaattgaacaaaaacttgaagttcag
gctgaagaagaaagaaagcaggttgaaaatgagaggagagaactatttgaggagagacgt
gctaaacagacagaactgcgccttctggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgccaagataattaagtatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctactcaaaagctaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaagtagaggaggcaggagaggaagaggagaag
gaagcaggtgtagttcatagtgatgcagagaaagaacaggaggaggaggaacacaagcag
gaaatggaggctaagatggaggaggaaactgaggtaagagaaggtgagaagcaacaggat
agtcagccagaagaagttatggatgtgttagagatggttgaaagtgtcaaaaacgtaatt
gctgagcaggaagtaatggaaactaatcaagttgaaagtatagagccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgatgttgagccagataaagaaagtaag
tctctttctcctggaaaagagaatattaattctctggaagtggaaaaggagtctgaggaa
aaagaagataaagaacctgaaccccagcctgagcctatggctcagcctcagcccccgcct
cagcccctgccccagagccagccccactctcagccccaacctgtactccagtcccagctt
ctcgctcagcctgagactgtgccgttagcagcagttttgcagcctccacctcaggttgtt
caggagcaagggaatctactacctgagcggaaggagtttcctctagagtctgtaaaactc
cctgacgtgcctgtagagccagtgttggcagtacactcagagaacaaaagtaagaacaaa
actaggagcagaagcagaggtcgagcgaggaataagacgagcaagagtagaagtcgcagc
agtagcagcagtagttccagcagcagctcgagcagcagcagcagcgggagcagctccagc
agtggcagcagtagtagtcgcagcagctccagtagcagctcgagcagcagtgggagcagc
agcagagacagcagcagcagcactagcagcagtagtgagagtaggagtcggagcaggggc
cgaggacataaccgagatagaaagcacaggaggagcgtggaccggaagcgaagggatact
gcaggactagaaagaagtcacaaatcttccaaaggtggtagtagtagagatacaaaagga
tcaaaggataagaattcccgatctgacagaaaaaggtctatatcagagagtagtcgatca
ggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaaaaggcgt
taa
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