Peromyscus leucopus (white-footed mouse): 114704195
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Entry
114704195 CDS
T07241
Symbol
Col9a3
Name
(RefSeq) collagen alpha-3(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04151
PI3K-Akt signaling pathway
pleu04510
Focal adhesion
pleu04512
ECM-receptor interaction
pleu04820
Cytoskeleton in muscle cells
pleu04974
Protein digestion and absorption
pleu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
114704195 (Col9a3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114704195 (Col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114704195 (Col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114704195 (Col9a3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
114704195 (Col9a3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
114704195 (Col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pleu00535
]
114704195 (Col9a3)
Proteoglycans [BR:
pleu00535
]
Extracellular matrix (ECM) proteoglycans
Others
114704195 (Col9a3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
114704195
NCBI-ProteinID:
XP_028741154
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Position
4:145500195..145523706
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AA seq
720 aa
AA seq
DB search
MGGLCAGGAGQGGAPSLAPPPAPLPTLLPGASRSERQPASHDRSSCSSPAAAGAASDGHL
RSESGTSRPPWSPGTSWEARQGWHRWRSRPPGLPGPPGPKGTSGKPGKPGEAGLPGLPGV
DGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGVSGLPGGIGLRGPPGPS
GLPGLPGPPGPPGPPGNPGVLPEGATDLQCPAICPPGPPGPPGMPGFKGPTGYKGEQGEV
GKDGEKGNPGPPGPPGIPGTVGLQGPRGLQGLPGPLGPPGDRGPIGFRGPPGIPGAPGKV
GDRGERGPEGFRGPKGELGRPGPKGIPGVAGPGGEPGMPGKDGQDGRQGLDGEKGEAGRN
GAPGEKGPNGLPGLPGRAGSKGEKGELGRAGELGEAGPSGEPGIPGDVGVPGERGEAGHR
GSVGALGPQGPPGAPGVRGFQGHKGNVGDPGLPGPQGLRGDVGDRGPGGAIGPKGDQGIA
GSDGLPGDKGELGPSGPVGQKGESGSRGELGPKGIQGPNGTSGVQGVPGPPGPLGLQGVQ
GVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQLAAHLRKPLAPGSIGRPGPAGPPGP
PGPPGSIGHPGARGPPGYRGPTGELGDPGPRGSQGDRGDKGTAGAGVDGPAGDQGPQGPQ
GVPGISKDGQDGAHGEPGLPGDPGLPGAVGAQGTPGICDTSACQGAVLGGGGEKSGPRNS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggggggcttgtgcgcgggcggggcggggcagggcggggcacccagccttgcgccgccc
ccagcccctctccccaccctgctgcctggcgccagtcgctcagagcgccagccagccagc
catgatcggagctcctgttctagccctgctgctgctggggcagcttctgacggccacctc
cgctcagaaagtgggacctcgaggcccccctggtccccagggacctcctgggaagcccgg
caaggatggcatcgatggagaagccggcctccaggtctgcctggccctccaggacccaaa
gggacctcagggaagccagggaagccaggagaggcaggactgccaggactgcctggtgtg
gatggtctgactgggagggatggacccccaggacccaaaggggcccctggagaacgggga
agtctaggacccccagggccaccaggacttgggggcaaaggcctccctggacctcctgga
gaggcaggagtgagtggcctcccaggtggtattggtctacgaggccccccgggaccctct
ggactcccaggcctgcctggccctccaggacctcctggacctcctggaaacccaggagtc
ctccctgaaggtgctactgatctgcagtgtcctgccatctgccctccaggccctcctgga
cccccaggaatgccagggttcaaggggcctactggctacaaaggggaacaaggagaagtt
ggcaaagatggtgagaagggtaatcctgggccccctgggcctcctggcattccaggcacc
gtggggctacagggcccacgaggattacaaggacttccagggccacttgggccccctggg
gaccggggtcccattgggtttcggggcccccctgggatcccaggagcacctgggaaagtg
ggtgacagaggcgaaaggggtccagaagggttccgcggccctaagggtgagctgggcaga
cctggtcccaaaggaatccctggagtggccggaccaggtggagagccaggcatgccaggc
aaggatggccaggatggcagacaggggcttgatggcgagaagggagaggctggtcgcaac
ggtgccccgggagagaagggccccaatgggctgccggggctccctggacgagccgggtcc
aaaggcgagaaaggagaactgggtagagctggggagttgggtgaggctggcccctctgga
gagccaggtatccctggagatgttggtgttccgggggagcgtggtgaggctggtcacagg
ggctcagtgggagcccttggcccacaaggccctcctggggcccctggcgtccgtggcttc
cagggccataaaggcaatgtaggagaccctggccttccaggcccccaaggcctacggggt
gatgtgggtgaccggggtccaggtggtgccataggccctaaaggagaccagggcattgca
ggttctgatggtcttccaggggacaaaggagagctgggtcccagtggccccgttggacaa
aaaggagagtctggaagccgaggggaactgggccccaaaggtatccagggccccaatggc
accagtggagtccagggtgtacctggtcccccaggtccactgggcctccaaggcgtgcag
ggtgtcccaggcatcacagggaagcctggagttccgggaaaggaagccagtgaacagcgc
atcagggagctgtgtggggggatgatcagcgagcaaatcgcacagttggctgcacacctg
aggaagcccttagcaccaggctccatcggcaggcctggtccagctggccccccaggcccc
ccaggccccccaggatccattggccaccctggtgctcggggtccccctggatacagaggt
cccactggggagctgggagatcctggacctagaggaagccagggtgacagaggagacaag
ggtacagcgggtgcaggagtggatggacctgctggggaccaggggccccaagggcctcaa
ggtgtacctggtatcagcaaagatggtcaagatggtgctcatggtgagcctggccttcct
ggtgatcctggccttcctggagctgttggtgctcagggaaccccagggatttgtgacact
tcagcctgccaaggagctgtgttaggagggggtggggaaaagtcaggtcctcggaactca
taa
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