Peromyscus leucopus (white-footed mouse): 114704290
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Entry
114704290 CDS
T07241
Symbol
Zc3h12a
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114704290 (Zc3h12a)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
114704290 (Zc3h12a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
Frey
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
114704290
NCBI-ProteinID:
XP_028741284
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All DBs
Position
2:complement(125653164..125662200)
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AA seq
595 aa
AA seq
DB search
MSDPRGKKPIQEASPTMSLWDLEDNHSCRGRPQPAQDPEAKEASAELQMKVDFFRKLGYS
SSEIHSVLQKLGVQADTNTVLGELVKHGSATDESARPRQTPAPSXPLVPRGGSTPKPSSL
EPSLPEEDKEGSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVPS
WRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAFESDGVVV
SNDTYRDLQGERQDWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLPSEH
RKQPCPYGRKCTYGIKCRFFHPERPSRPQRSVADELRANALLSPPRTPVKDKSGQRPSPA
SQPSSVSSEAEQGSLDGKKLGARSSPGPHQEGSTQTFTPAGRSLPVSGSSFGPTEWLPHT
LDSLPYTSQECLDSGIGSLESQMSELWGVRGGTPGDSGPTRGPYAGYHTYGSELPAAPAF
SPFRQPMGAGHFSVPTDYVPRLPTFPAREYWSEPYPLPSPTPVLQEPQRPSPGAGRDPWG
RANERAKERAGVYTKLCGVFPPHLVEAVMGRFPQLLDPQQLAAEILSYKSQHLSE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacccccgtgggaaaaagcctatccaagaagccagccccaccatgagtctgtgg
gatcttgaagacaaccacagctgccggggtcgccctcagccagcccaggatcctgaggct
aaagaggcctctgctgagttgcagatgaaggtggactttttccgaaaactgggctactcg
tcctccgagatccacagtgtcctgcagaagctgggggtccaagcggacaccaacacggtg
ctgggggagctggtgaagcatggttcagctactgacgagagtgccaggcctcgacagacc
cctgcccccagcncccctctggtgcccaggggcggaagcacccccaagccttcctctcta
gaaccttcactcccagaggaggacaaggagggcagtgacctgagacctgtggtcatcgat
ggaagcaatgtggccatgagccacgggaacaaggaagtcttctcttgccggggcattctg
ctggctgtgaactggtttctggagcggggccacacagacatcaccgtgtttgtaccatct
tggaggaaggaacagcctcggccagatgtgcccatcacagaccagcacattctgcgggaa
ctagagaagaagaagatcctggtgttcacaccgtccaggcgtgtaggtggcaagcgcgtg
gtgtgctacgatgaccgcttcatcgtgaagctggcctttgaatccgacggggtggtggtc
tccaacgacacgtaccgggacctccaaggcgagaggcaggactggaagcgcttcattgag
gagcggctgctcatgtactctttcgtcaatgacaagttcatgccccctgatgaccctttg
ggacggcatgggcctagcctggacaacttcctgcgtaagaagccactgccttctgaacac
aggaagcagccatgtccctatgggaggaagtgcacctacggaatcaagtgccgattcttc
caccccgagcggcccagccgcccccagcgctctgtggctgatgagctccgtgctaatgcc
ctcctctcaccccccaggacccctgtcaaggacaaaagtggccagaggccttcccctgcc
tctcagcccagctctgtgtcttcagaagctgagcaaggcagcctggatgggaaaaaactg
ggggccagatcatccccaggcccccaccaagaaggctcaacacagacctttactccggct
ggcaggagcctccctgtcagtgggagcagctttgggcccacagagtggctcccacacacc
ctggactcgctcccctacacctcccaggagtgccttgactcgggcattggctccctggag
agccagatgtcggaattatggggggtgcgaggaggcacccccggggactcgggcccgact
cggggcccttacgctggttatcacacctatgggtctgagctcccagcagcccctgccttt
tctccctttagacagcccatgggtgctggccacttcagcgtccccactgactatgtgccc
cggctccccacctttccagccagagagtactggtctgagccataccctttgccctcaccc
accccggtccttcaggagccccagagacccagccccggggctggcagggacccctggggc
agggcgaatgaaagggccaaagagagggccggtgtgtacaccaagttgtgtggtgtcttc
cccccacacctggtagaggctgtgatggggcgcttcccgcagctcctggacccccagcag
ctggccgctgagatcctttcttacaagtcccagcacctcagcgagtga
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