Peromyscus leucopus (white-footed mouse): 114704376
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Entry
114704376 CDS
T07241
Name
(RefSeq) helicase SRCAP isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114704376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114704376
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
114704376
SWR1 complex
114704376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
114704376
NCBI-ProteinID:
XP_028741413
LinkDB
All DBs
Position
1:complement(77039444..77089877)
Genome browser
AA seq
3234 aa
AA seq
DB search
MQSSPSPAHSQLPILQTQMVSDGMTGSNPVSPASSSSPASSGAGGISPQHIAQDSSLDGP
PGPPDGTTVPLEGLSLSQAADLVNKGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS
LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE
ERARREEQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT
EKYSDLLSQSLNQPIASSKAASSPCLGSSSAASSPPPPVSRLDDEDGDFQPQEEEEDDEE
TIEVEEQQEGNDAETQRREIELLRHEGELPLEELLRSLPPQLLGGPSSPSQTPSSQDSDT
NDGPEENVDEEPSQDLEVNPPPSSVTQCNQQRWHPDEDDEEFTANEDEAEDEEDTIAAEE
QLEGEVDHAMELSELAREGELSMEELLQQYAGAYAYDTSAPGSGNSEEEEEVEANSYDCE
LEETREVEEAAQEDSSSQSDSAEEQSEDEEDEQSEEEEMSGSSRSEESESDESEDARSQS
QADEEQEDEGDDDDDDDDDDFGVEYLLARDEERSEADGGSGPPTPGPTTTLGPKKEITDI
AAAAESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGL
GKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKL
KRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNS
QRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVK
RLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHF
MSVINILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRFD
LIGLEGRVSRYEADTFLPRHRLSRRILLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGR
TVVVVNSPRAPLGPVPVRPPPGPEVLAQPTIGPVPPVLPAPLMVSASPAGTPVVPASRPP
GPVLLSPLQPNTGSLPQVLPSPMGVMSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSSSL
LKPLTVPPGYTFSPVAATTTSTTIATVTTTAVPAPNSTPQRLILSPEMQARLPSGEVVSI
GQLASLAQRPVASAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQ
HHLISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPSSMVNNTG
VVKIVVRQAPRDGLTPVPPLAPAPRPSSSGLPAVLTSRPTLTPSRLTTPTLGTTRAPIPT
PTLVRPLLKLVHSPSPEVSASAPGAAPMTISSSLHMPSSLPGPASSPMTVHNSSPLASPV
SSTVSVPVSSSLPISVPTTLSAPGSAPLTIPITAPLPVSDLGPALLTSVAPALAVVSAGS
GPPLASAGVSPSVSALALGLATTPALSPPQTSGHSLLLATTSSHVPGLNSAVAPACSPVL
LPASALTSPFPVSPSSAPAQASLLAPAPSTSQALSTSLTPMVASQTAILGPSPTSPLAPL
SVLAPSPGSVPLLAPSQTPIPSVTPPSMPGTPLPSSSLVSASTPVLAPSSTQTMVSTPAS
SALSSLASSQTLTLTPTLATLGGLSPSQTHSLGTGSPQGPFPTQTLSLTPTPAQTLSLAP
GVPLGPTQTLSLAPAPPLAPSSPVGPTPAHTLTLAPASSSASLLVPTSVQTLTLSPAPVP
VPTLGPSATQTLALAPALTQAPASQASSLVVSASGAASLPATMVNRLSVPKDEPETLTLR
SGPPSPTPTATSFSGPRPRRQPPPPPRSPFYLDSLEEKRKQQRSERLERIFQLSEAHGAL
APVYGTEVLDFCTLPQPVASPISPRSPGPSHPIFWTYTEAAHQAVLFPQQRLDQLSEIIE
RFIFVMPPVEAPPPSLHACHPPPWMAPHQAAFQEQLACELWPRARPLHRIVCNMRTQFPD
LRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTR
VEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHR
IGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPL
EEPPGSSASSVPEEEEEAVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNEN
DVFPAGEGEEASRPGAEEEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQ
AEEQVEAARKDLDQAKEEVFRLPQEEEEGSGAGDEMSCGTSGGSHRRSKRVKAPERLGTR
VSERLRGARAETQGANHTPVTSTHPTCNTSMPPQCSPVRERIPRPVPRPRHAPAPAPTPA
PAPPVTSALPAAPIPISAPNPVAILPVHILPTPAPLLQLPPACSSPTCISPSACTPPPTC
TPSPAPTSHSTASSPTPLDSLPVPISPGVTNLPLNSEVELCARELVPVASLELPGMTNSE
ASLVSPGPPKDLLPGSVDILPESEKNLLTPAPSSTLEADNIPNGQDQEVPGPEEGTSPTL
LPGGEGLTTSLSESNGLELPPSAASDEPLQEVLEAHRNLEEMGEVQIPISNPEKPQELVS
AEVTAPSTSPSATSSPEGPSPARPPRRRTSADVEIRGQGSGRAGQPPGPKVLRKLPGRLV
TVVEEKELVRRRRHRGTASTLVPGVSEANTSPGSPSTHSMSGPESSPPSSGPCEAAPSSS
LSTPTQHPFIACRHVELGVTGGGSPENGEEAELTITPPAVKRRRGRPPKKNRSPADAGRG
VDETPSSISKGKTNGVDPVPGPETVTAVAEPALRPQFVPGLAQPLGPEPVHRPEPILSPV
EKRRRGRPPKARDLPIPGTISSPGDGNLESRTQPLPLPAPLTPLPPLLACPTAVANTVTT
VTISTSPPKRKRGRPPKNPPSPRPSLGPVLDTDSPSVLESCGLGVRRQPLGQAESEGSSS
DEDGSRPLTRLARLRLEAEGIRGRKSEGSMVMAVIQDDLDLADSGPSGLELTPPVVSLTP
KFRSTRLRPGSLVPPLETEKMPRKRSGAPVGSSGMAKRGRLQPPSPLGPEGSVEESEAEA
SGDEEEGDGTPRRRTGPRRLVGTTNQGDQRILRSSAPPHLSVPTVSHRGRKAKT
NT seq
9705 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcccctcccctgctcactctcagctcccaatcctacagacacagatggtg
tcggacggcatgacagggagcaatcctgtatcccctgcctcatctagttctccagcttct
agtggggcaggtggtatctccccgcaacatatagcccaagattcctctctggatggacct
ccaggcccgccagatggtaccacagttcctctggaggggctcagcttatcccaagctgct
gacctggtcaacaagggcccaaagtgggagaagagccatgcagaaattgcagaacaagct
aaacatgaagctgaaattgaaactcgaattgctgaacttcgaaaggagggattctggtca
ttgaaaaggctacctaaagtgccagagcctccccgtcctaaaggccattgggactatcta
tgtgaagagatgcagtggctctcggctgactttgctcaggagcgccgatggaaacgaggt
gtggcccggaaggtggtacgtatggtaatccggcaccatgaagagcagcgacaaaaagag
gagcgagctcggagagaagaacaggccaagctgcgccgaattgcttctaccatggccaag
gatgtcaggcagttctggagcaatgtggagaaggtggtacaatttaaacaacagtcccgg
cttgaagaaaaacgtaagaaagccttggacctgcacctggacttcattgtgggacaaact
gagaagtattcagaccttctgtctcagagccttaaccagccgatagcgtccagcaaagct
gcctcgtccccttgtctcggttcttcctcagcagcatccagtcctccaccccctgtttct
cggctggatgatgaagatggggacttccaaccccaagaggaagaagaggatgatgaggag
accattgaggttgaagaacagcaggagggcaatgatgcagagacgcagaggcgtgagatt
gaactgcttcgccatgagggagaactgccactggaagagctgctccgttccctgccccct
cagctattgggtggaccttccagcccctctcagacaccctcgtctcaggacagcgatacc
aacgatgggcctgaagaaaatgttgacgaggaaccgtctcaggatttggaggtaaaccct
ccaccttcctctgtaacacagtgcaaccaacaacgttggcatcctgatgaagatgatgaa
gagtttactgctaatgaagatgaagcagaggatgaagaggacaccatagcggctgaggag
cagttagagggagaggtggaccatgccatggaactgagcgagttggctcgagaaggtgag
ctttctatggaggagctactgcaacaatatgctggggcctatgcctatgatacctctgct
ccaggctctggaaacagcgaagaggaagaggaagttgaagccaatagttatgactgtgaa
ctagaggaaacaagagaagttgaagaggcagctcaagaagatagtagcagtcagtcagat
tctgctgaagagcagagtgaggatgaggaagatgaacagtcggaggaggaagaaatgagt
ggaagttcacggtcagaagaatctgagtctgatgaatctgaggatgctcggtcacaaagc
caagcagatgaagaacaggaggatgagggagatgatgatgatgacgatgatgatgatgat
tttggggtggaatacttgcttgctcgagatgaggaaaggagtgaggcagatgggggcagt
gggcctccgaccccaggtcccaccaccactctagggcccaagaaagaaattactgatatt
gctgcggcagctgaaagtctccagcccaagggttatactttggccactacccaggtgaag
acacctattccacttcttctgcggggccagctccgagagtaccaacacattggccttgac
tggctggttactatgtatgagaaaaagcttaatggcattcttgcagatgagatgggactg
gggaagacaatccagaccatctccttgcttgctcacttggcctgtgagaaaggtaactgg
ggtcctcatttaatcattgttcctaccagcgtgatgttgaactgggagatggaattgaaa
cgttggtgtcccagctttaaaatcctcacttactatggagctcagaaagagaggaagctc
aagcggcagggctggaccaagcccaatgctttccatgtgtgtatcacatcttacaagctg
gtgctacaggatcaccaggcttttcgtcgcaagaactggcgctatctcattctggatgag
gctcagaatatcaagaatttcaagtcccaacggtggcagtcactgctcaacttcaacagc
cagaggcgcctgctcctgacaggaactcccttgcaaaatagcctcatggagctgtggtcc
ttgatgcattttttaatgccacatgtcttccagtctcatcgagagttcaaggaatggttc
tctaaccctctaactggcatgattgagggaagccaagaatataatgaaggtctggtcaaa
cgccttcacaaggttctgcgaccttttttgcttcgccgagttaaggtggatgttgagaag
cagatgcccaaaaagtatgagcatgttattcgatgccggctttccaagcgccaacgctgt
ctctatgatgacttcatggcccagaccacaactaaggagacactagctacaggccatttc
atgagtgtcatcaacattttgatgcagttgcgcaaagtctgcaatcatccaaatctattt
gaccctcgacctgttacctcccctttcatcaccccaggcatctgctttagcaccgcctct
ctggtgctaagggccactgatgtccacccactccagcgcattgacatgggtcggtttgat
cttattggcctggagggtagagtctctcgatatgaggctgacacatttctaccccgccac
cgtctttcccgccgcattctgttagaagtagctactgctcctgatcccccacctcgaccc
aagccagtcaagatgaaagtcaacaggatgctgcagccagtgcccaagcaagaaggccgt
acagtggtggtggtgaacagcccacgggcaccccttggccctgtcccagtccgcccccct
ccaggccctgaggtcttagcccagcccaccattggtccagtccccccagtgctgccagca
ccactcatggtgtcagcttcgcctgccggaaccccagttgttcctgcttcccggccgcct
ggacctgttctcttgtctcccttgcagccaaatactggttctctcccccaggtgttgcca
tcccccatgggagtcatgagtgggacctcacggcctcccacaccaaccctgtcactgaag
ccagccccacctgccccagttcgcctgagcccagctccacctccaggctcctctagcctg
ttgaagcccctcacagtgcctccaggctacactttctctcctgttgctgctaccaccact
tccaccaccatagcaactgttaccactacagcagtgccagctccgaattctacaccacaa
cgcctcatcttatctcctgaaatgcaggctcgtctgccctctggagaagtggtcagcatc
gggcagttggcctccttggcacaacgtccagtggcgagtgccgggggaagcaaacctctc
accttccaaatccagggcaacaaactgactttgactggtgcccaggtgcgccagctggct
gtggggcagccccgcccgctgcaaaggaatgtggtgcacctggtgtcagcaggggggcag
caccacctcatcagccagcctgcccatgtggccctgatccaggccgtggccccgacccct
ggccccacccctgtctctgtgctgccttcttcgacccccagcaccacccctgcccccact
ggcctcagccttccgcttgctgctaaccaggtgccgtcatccatggtgaacaatacaggc
gtggtgaagattgtagtaagacaagcccctcgggatggactgacacctgtcccaccactg
gcaccagcacctcggccttcaagttctgggcttccagctgtgttgacgtcacgccccaca
ttaacccctagccgtctgaccacacccactctgggtactactcgtgcccctataccaaca
cccactctagtgaggcccctcctcaagctggtccacagtccttcgcctgaagtcagtgca
tcggcacctggagctgctcccatgaccatttcttcttctctgcacatgccatcctcactc
cctgggccagcctcttctccgatgacagttcacaattcctctccccttgctagtcctgtg
tcctcgacagtctcagtccctgtgtcatcctcacttcccatctctgtccctaccacactg
tctgccccaggctctgctccactgaccatccccatcacagcacccttgcctgtttcagat
ttaggtccagctctgttgaccagtgtggctccagcactggctgttgtctcagcaggctct
ggaccacctttggcgtcagctggggtttccccgtcagtgtcagccttggctctgggtttg
gccactactccagccctgtccccacctcagacatctggtcactctctgttgctggctacc
acctcttcacatgttccaggattgaactcagctgtggccccagcatgctcacctgtcctg
ctgccagcttcagctctaaccagtcctttcccagtatcaccaagttcagctccagctcag
gcttcccttctggctccagcaccttctacatctcaggctttatccacctctctgactcct
atggtggcttcacagacagcaatcctgggcccttctccaacttctcctctggctccactg
tcagttctggctccgtcaccaggctctgtccctcttctggctccatcacagactccgatt
ccatctgtaacaccaccatcaatgccaggaacccctttaccctcatcatcactggtatca
gcttcaactcctgtgttggctccctcatcaactcagactatggtgtcaaccccagcttca
tcagctctctcaagcctggcttcttctcagacattgaccctaaccccaacgttagcaact
cttggtggattgtctccatctcagacacattctttgggaacagggagtcctcagggcccc
tttccaactcagacattgtcattgactccaacgccagcacagacactgtctttagcacca
ggagtaccactgggtccaactcaaacactgtctctggctccagcaccccctttggctcca
agttctccagtaggcccaactccagctcacacactgactttggctcctgcatcatcatct
gcttcactcctggtcccaacttcggtgcaaacactgaccttgagccctgccccagttcct
gtgcccactctgggtccatctgccacccagacgttagccctggccccagccttaacacag
gctccagcttcccaggcgtcttccctcgtcgtttcggcatctggtgccgcttccttgcct
gccaccatggtcaaccggctgtctgttcccaaggatgagcctgagacactgactttgcga
tctggtcctcccagccccactcccactgctacctcgttcagtgggccccggcctcgacgc
cagcccccaccaccacctcgttcccctttctatctggattctctggaagaaaagcggaag
cagcagcgatctgaacgcctggaacggattttccaacttagtgaggctcatggggccctg
gcacccgtgtatgggactgaagtcctggatttctgtactttgccccaacctgttgccagc
cccatcagccctcgttctcctggccccagccaccccatcttttggacttacaccgaggct
gcccatcaggctgtactgtttccccagcagcgactagaccagctatcagaaatcattgag
aggttcatctttgtcatgcctcctgtggaggcacctcccccttccctgcatgcctgccac
ccacctccttggatggcccctcaccaggcagccttccaggagcagttggcctgtgagctc
tggccccgcgcccgtcctttgcaccgtattgtatgtaatatgcgtacccagttccctgac
ttgagactcatccagtatgattgtggaaagttgcaaacattggcagtgttgttgcggcag
ctcaaggcagagggccaccgggtgctcattttcacccagatgacccgaatgctggatgtg
ttggagcagtttctcacctatcatggtcacctatatttgcgtctggatgggtctactaga
gttgaacagagacaggccttgatggaacggttcaatgctgacaaacgcatattctgcttc
atcctttcaactcgaagtgggggtgtgggtgtgaacctgacaggagcagacactgttgtt
ttttatgacagcgactggaatcccaccatggatgctcaggcccaggatcgttgtcatcga
attggtcagactcgggatgtccacatctataggcttatcagtgaacgaacagtagaggag
aacattctaaaaaaggcaaatcagaagagaatgttgggagacatggccatcgagggaggc
aacttcactacagcctattttaaacagcagaccatccgagagttgtttgatatgcctctg
gaggagccgcccggctcctctgcatcttctgtccctgaagaggaagaggaagctgtggcc
agtaagcagactcatattttggagcaggcattgtgccgggcagaagatgaagaagatatc
cgtgcagccacccaggccaaagccgaacaagtggctgagcttgcagaatttaatgagaac
gatgtgtttcctgctggtgagggagaggaggccagtcgacctggggctgaggaggaggag
atgtccagggctgaacaggaaattgctgctcttgtagaacagctgactcccattgagcgc
tatgccatgaagttcctagaggcttcactggaggaagtaagccgagaggagctcaagcag
gcagaagagcaagtggaagctgcccgaaaagacctggatcaagccaaggaggaggtgttt
cgactgccccaagaggaagaggaaggatcgggggctggggatgagatgtcttgtgggact
agtggaggcagccaccggcgcagtaagagagtcaaggctcctgagaggctggggactcgt
gtcagtgagcgtcttcgtggagctcgagctgagactcaaggagccaaccacactcctgtc
acatccacccatcctacctgcaacacctccatgcctccccagtgcagccctgtgagagaa
cgaattcccaggccagtgcctaggcctcgacatgctcctgctcccgctcccactccagct
cccgctccccctgtaacttctgccctacccgcagctcccatacccatttcagccccaaat
ccagtagccattcttcctgtccatatcttgcctactcctgcacctctgcttcagctccct
ccggcttgttcttctcctacttgcatctctccttctgcctgtacccctccacccacttgt
accccctcacccgctccaacctctcattcgaccgcttcttcaccaaccccacttgattcc
ctccctgtgcccatctctcccggggttaccaaccttcctttgaactcagaagtagagctg
tgtgcacgagagttggtacctgtggcgtctctagagctgcctggaatgaccaattctgag
gcttccctggttagtcctgggcctccaaaggatcttttgccagggtctgttgatattctg
cctgagtcagagaagaatcttctaactcctgcacccagttcaaccctggaggctgacaac
atccccaatggtcaggatcaagaggtgccaggtcctgaggaagggactagtcccacactg
ctccctggtggtgaggggttgaccacgagtctgagtgagagcaatgggctggagctccca
ccctcggcagcatctgatgagccacttcaggaggtgttggaggctcacaggaacttggaa
gaaatgggagaggttcagatcccaatctccaacccagaaaagccacaagaacttgttagt
gccgaggttacagccccatccacctcaccttcagccacctcctctcctgagggtccttca
cctgcccgtcccccacggcgtcgtaccagtgctgatgtggaaatcaggggtcaggggtct
ggccgggcaggacaacccccaggtcccaaagtgcttcgaaagctgccaggacggctggta
actgtggtggaagaaaaagaacttgtgagacgtcggcgacatcggggaactgccagcacc
ctagtacctggggtatctgaagctaacaccagtccaggaagcccatccacccacagcatg
tcagggccagaatcctcacctcccagcagtgggccctgtgaagctgctccgtcatcctca
ctgtccaccccaacccagcatcccttcatagcttgtcgtcacgttgaactgggtgtgact
ggtgggggcagcccagagaatggagaagaagcagagcttaccatcactccacctgctgtg
aaacgtcggaggggaaggccccccaagaagaacaggtctccagcagatgctgggagaggg
gtggatgagacaccttcatccatctctaaggggaaaaccaatggggttgacccagtccct
gggcctgagacggtaactgctgttgcagagcctgccctcaggccccagtttgttcctggg
ctggcccagcctctcggacctgaaccagttcacagaccagagcccatcttgtcacctgtg
gaaaaaagacgacgtgggcgtccccctaaagcaagggatttgcccattcctgggaccata
tcctctccaggggatggcaacttagagagccggacacagccactccccctcccagcaccc
ctgacaccactcccaccacttctagcctgtcccactgctgtcgccaacactgtcaccact
gtcactatttcaacctccccacctaagcggaagcgaggccgacctcccaagaatccacca
tcacctcggcccagccttggccctgtcttggacaccgacagcccttctgtccttgagagt
tgtggattgggggtgcggcggcaacccctgggccaggcggaaagtgaaggcagttcctct
gatgaggatggaagccgccctcttacccgcctggcccgtctacggcttgaagcagagggc
attcggggacgaaagagtgaagggtccatggtgatggcggtaattcaggatgacctggat
ttagcagatagtgggccgagtgggttagaactgacaccacctgtggtctcattaactccc
aagttccggtcaacccgcctgcgtccagggtctctagttcccccactagaaactgaaaaa
atgcctcgcaaaaggtcaggggctccagttgggagttctgggatggcaaagaggggccgc
ttgcagcccccaagtcccctggggcctgagggttcagtagaggagtcagaggcagaagcc
tcaggtgacgaggaggaaggagatggaaccccacgccgccgaaccggtccccgcaggctc
gttgggaccaccaaccaaggggaccagcgtatcctgcgtagtagtgctcctccccaccta
tctgtccctactgttagtcacagaggtcgcaaggccaagacgtga
DBGET
integrated database retrieval system
