Peromyscus leucopus (white-footed mouse): 114704511
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Entry
114704511 CDS
T07241
Symbol
Ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pleu03009
]
114704511 (Ddx55)
Enzymes [BR:
pleu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114704511 (Ddx55)
Ribosome biogenesis [BR:
pleu03009
]
Eukaryotic type
Pre-60S particles
Helicases
114704511 (Ddx55)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
YbjM
Motif
Other DBs
NCBI-GeneID:
114704511
NCBI-ProteinID:
XP_028741610
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All DBs
Position
23:15836352..15852951
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AA seq
600 aa
AA seq
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MEHVTEGSWETLQVPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPIVEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLTHFTKHFPQFSQILWIGG
RNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENHYMICKADEKFNQLVHFLRNRQQEKHLVFFSTCACVEYYGKALEALLKRVKILCIH
GKMKYKRNKIFLEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTVDLLPKLRAMATADRAVFEK
GMKAFVSFVQAYAKHECSLIFRLKDLDFASLARGFALLRMPRMPELRGKQFPDFVPTDID
TDTIPFKDKVREKQRQKLLEQKRKERTENEGRRKFIKNKAWSKQKAKKERKKKMNAKRKK
DEGSDIDDEDMEELLNDTRLLKKFKKGKITEEEFEKGLLTHTKSTVQLTDLGVSDSGEDS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggttcatgggagacgctgcaggtgccgctgcatcctcgggtg
ctgggcgcgctgcgcgagttgggctttccgcacatgacgccggtgcagtctgccaccatc
cctctgttcatgaaaaacaaggatgtcgccgcagaagctgtgacaggtagtggaaaaacc
ctggcttttgtcatccccattgtggagattcttctgaggagggaggagaagttaaagaag
agccaggtaggagccatcatcatcacccccactcgcgagctggccattcagatcgatgag
gtcctgacccacttcacgaagcacttcccgcagttcagccagattttgtggatcggaggc
cggaatcctggagaagatgtggagaggttcaagcagcatggtgggaacatcattgtggca
accccaggccgcctggaggacatgttccggaggaaggctgagggtctggacctggccagc
tgtgtgaggagcttggatgtcctggtgctggatgaggcagacagacttcttgacatgggc
tttgaagcaagcataaacacgatcctggagtttttgccaaagcagaggagaacaggcctt
ttctcagccacacagacacaggaagtggagaacttggtgcgggcgggcctccggaaccct
gtccgaatctccgtgaaggagaagggcgtggcagccagcagcactcagaagacaccctcc
cgcctagagaaccattacatgatatgtaaagcagatgagaaattcaatcagctggtccat
ttccttcggaaccgtcagcaggagaagcacctggtcttcttcagcacgtgtgcgtgtgtg
gaatactatggaaaggccctggaggccctgctgaagagagtgaagatcctgtgcatccat
gggaagatgaagtacaagcgcaataagatcttcctggagttccgcaagctgcagagtggg
atcttggtgtgcactgacgtgatggcccggggaattgatattcctgaagtcaactgggtt
ttacagtacgaccctcccagcaatgccagtgcctttgtgcatcgctgtggacgcacagcc
cgcatcggccacggtggcagcgctctggtgttcctgctaccgatggaggaggcgtacatc
aacttcctggccatcaaccagaagtgccccctgcaggagatgagcctccagaggaacacg
gtagaccttctgccgaagctccgggccatggccacggccgacagggcagtgttcgagaag
ggcatgaaagccttcgtgtccttcgtccaggcttacgcgaagcacgagtgcagcctcatc
ttcaggctgaaggaccttgactttgccagccttgcccgagggtttgccctgctgaggatg
cccaggatgccagaactgagggggaagcagttcccagactttgtgcccacggacatcgac
actgatacgattccatttaaagataaagttagagaaaaacagaggcagaagctgttggag
caaaaaagaaaagagagaacagaaaatgaagggagaagaaaattcatcaaaaacaaagct
tggtcgaagcagaaggccaaaaaggagaggaagaagaagatgaatgccaagaggaagaag
gatgagggttctgatatcgatgacgaggacatggaggaactccttaatgatacaaggctc
ttgaaaaagtttaaaaaagggaaaatcacagaagaggaatttgagaaagggctgttgaca
cacaccaaaagcacagtccagctgacagacttaggggtctcagactcaggagaggacagt
tga
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