Peromyscus leucopus (white-footed mouse): 114704690
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Entry
114704690 CDS
T07241
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114704690 (Gapvd1)
Membrane trafficking [BR:
pleu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
114704690 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF7595
Motif
Other DBs
NCBI-GeneID:
114704690
NCBI-ProteinID:
XP_028741896
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All DBs
Position
4:4524936..4597164
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AA seq
1485 aa
AA seq
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MVKLDIHTLAHHLKQERLYVSSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQESTQSVIHTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLTERFSPAQQEKLFGEKGS
DRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQHGIISDAPINEVARFNLMQVGRLLQQLAMTGTEEGD
PRTKNSLGKFDKGCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYISYSQLITLVNF
MKSVMSGDELKEDRMALDNLLANLPQAKPGKSSSLDMTPYSTPQMSPATTPANKKNRLPI
GQQLAAITAWDSSATNLTAHIPLVTPFATRSRSRSNMLMDLHMDHEGSSQETIQEVQPEE
VLVISLGTGPQLTPGMMSENEVLNMQLSDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNVDEDRLQEIAGAAAENVLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDDIAHGPHQ
LTSPPSQSESLLAMFDPLASHDGASAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPN
FGSHVLTAAEMEAFRQRHSYPERLVRSRSSDIVSSVRRPMSDPSWNRRPGNDELPPAAAT
GATSLVAAPHSSSSSPSKDSSRGEAEERKDSDDERSDRSRPWWRKRFVSAMPKAPIPFRK
KEKQEKDKDDLGPDRFSTLTDEPSPRLSAQAQVAEDILDKYRNAIKRTSPSEGAMANDES
AEVMGDGESAHDSPRDEALQNISADDLPDSASQAAHPQDSAFSYRDVKKKLRLALCSADS
VAFPVLTHSTRNGLPDHTDPEDNEIVCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDN
RTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVC
VRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDA
QLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAP
WPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKA
NPPCLLSTVQYISSFYASCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctagatatccatactctggcccaccacctcaaacaggagcgtttgtacgtg
agctctgagaaacagctcattcagaggctaaacgcagatgtgctgaagacagctgaaaag
ctgtatcgaacggcatggattgcaaagcaacagaggattaatttggatcggcttattata
accagtgctgaagcttcccctgctgagtgttgccagcatgccaagattttggaagataca
cagtttgttgacggatataagcaactgggatttcaggaaacggcctatggagaattcttg
agtcggttaagagaaaatcctcgtcttattgcatcctctttggttgctggagaaaaactg
aatcaggagagcacccagagcgtcatccacacagtgtttacctccttgtatggcaactgt
attatgcaggaagatgagagctacctccttcaggtgttacgatacctgattgaatttgaa
ctgaaggaaagtgacaaccccaggcggcttttgaggagaggaacttgtgccttcagtatc
ttatttaaactcttttctgaaggactgttttctgccaaacttttccttacagctacttta
catgagcccatcatgcagctccttgtggaagatgaagaccatctggaaacagaccccaac
aagctaactgagagattctccccagctcagcaggaaaaactctttggagagaaaggctca
gacagattcaggcaaaaggttcaagaaatggtagattccaatgaggccaaactggtggct
ttggtgaacaaatttattggttatctcaaacagaacacgtactgctttccacacagtctg
aggtggattgtgtcacagatgtacaaaactctgtcttgtgtggacaggctggaggttggg
gaggtcagagccatgtgcaccgaccttctgctggcttgcttcatctgtcctgcagttgtc
aatccagagcagcatggaataatctcggatgctcctatcaatgaggtggccagatttaac
ctgatgcaggttggccgccttttgcaacagttagccatgactggcactgaagaaggagat
ccccggaccaaaaatagccttggaaaatttgacaaaggctgcgttgctgctttccttgat
gttgttattgggggccgggccgtggagactccgccgatgtcctccgtcaatcttctggaa
ggcttgagcagaactgtggtgtatataagttacagtcagcttattactctggtaaacttc
atgaagagtgtgatgtctggagatgaactgaaagaagatagaatggctcttgacaatctg
ttggcaaacctgcctcaggccaagccagggaagagcagcagtctagacatgactccctac
agcactcctcagatgtctccagcaaccactccagccaataaaaagaatcgattacctata
ggacaacagttagcagccatcactgcctgggattcctcagccaccaatcttactgcccat
attcctctagtgaccccatttgcaactcggagcagaagccgaagtaatatgctaatggac
ttacatatggaccatgaaggatcatctcaagaaaccatccaggaggtacaaccagaagag
gtgctggtcatttccttagggacaggtccccaacttactccagggatgatgtcagaaaat
gaggtcctaaacatgcagctctcagatggaggacaaggagatgtccctgttgatgaaaac
aaactccacggtaaacctgacaaaaccttgcgcttttccctctgcagtgataatctggaa
ggcatatctgaaggtccttctaatcgctccaattcagtgtcttctcttgacctggaagga
gagtctgtatctgagcttggggcaggaccttctgggagtaatggagtcgaagcactacag
ctgctagaacatgagcaagctacaacccaagataatcttgatgataagctgaggaagttt
gagattcgtgacatgatgggactaacagatgatagggacatatcagagacagtgagtgag
acctggagcaccgatgtcctgggaagtgactttgacccaaacgttgatgaagatcgtttg
caagagattgcaggtgcagcagcagagaacgtgttaggcagtttgctgtgcctccctggt
tcagggtcagttctccttgacccttgcactggctctaccatatcagagaccacaagtgaa
gcttggagcgtagaggtattgccaagtgactcagaggctccagacttaaaacaggaggag
cgcctccaggagctggagagctgttctggactgggcagcacatctgatgatacggatgtc
agggaggtcagttcccgccccagcacaccaggcctcagtgttgtgtccggtataagtgct
acatcagaggatattcccaataagatagaagacctgagatctgagtgcagctctgatttt
gggggtaaagattctgtaactagtccagacatggatgacatagcccacggtccccaccag
ctgacctctcctccctctcagtcagagtctctgcttgccatgtttgatccactggcttcc
catgatggggcctctgctgtggtaaggccgaaggttcactatgcccggccctcgcatccg
cccccggatcctccaatcttggaaggagcagtgggaggaaatgaggccaggctgcccaac
tttggttctcacgtcttaactgcagctgaaatggaggcgttcaggcagaggcactcgtac
ccagagagactggttcgcagccgcagctctgacatagtgtcttctgtccgacggcccatg
agcgaccccagctggaaccgccgtccaggaaatgacgaactccctccagctgctgccacc
ggtgctacttctttggtggctgcgcctcactcatcatcttcttccccgagtaaggactct
tcaagaggagaggctgaagagcgcaaggacagtgacgatgagaggtcggacaggagcagg
ccttggtggagaaaacgcttcgtgtcagctatgcctaaagctcctataccatttagaaag
aaagaaaaacaagaaaaagacaaagatgatctggggcctgacagattctcaacactcaca
gacgagcccagccctaggctcagtgcacaggctcaggttgctgaagatatcctggacaaa
taccggaatgccattaaacggaccagccccagtgaaggagccatggcaaatgatgagagt
gcagaggtcatgggtgacggtgaaagtgctcatgactcccctcgtgatgaagccctgcag
aacatctcagctgacgatctcccagactctgccagccaagcagcccaccctcaggattct
gctttctcttacagagatgtgaagaagaagctgaggcttgcactttgctctgcggactcg
gtggccttcccggtgctgacccattcaacaaggaacggattgccggaccacacagacccg
gaagacaatgaaattgtatgcttcttaaaagttcaaatagctgaagcaattaatttacaa
gataagaacttaatggctcaacttcaagaaacaatgcgttgtgtgtgccgctttgacaac
aggacttgtaggaagctgctggcatccattgctgaagactacaggaaaagagccccgtat
attgcttatctcacccgctgtcgacaaggactgcagaccacacaggcgcacctggaaagg
ctcttgcaaagagttctgcgggacaaagaagtagccaatcggtactttaccaccgtctgc
gtgcggttactgcttgagagcaaagaaaagaagatcagggagttcattcaagactttcag
aaacttactgctgctgacgacaaaacagctcaagtggaggattttctgcagttcctgtac
ggcgccatggctcaggacgtcatctggcaaaacgccagtgaggagcagctgcaggatgct
cagctggccatcgagcggagtgtgatgaatcggatcttcaagcttgctttctaccctaac
caggacggggacatactccgcgaccaggttctgcatgaacatatccagagattatctaaa
gtagtgacggcaaaccacagagctctgcagataccagaggtttatcttcgtgaggcccca
tggccatctgcacagtcagaaatcaggacaataagtgcttacaaaactccccgggacaaa
gtgcagtgcatcctgagaatgtgctccaccatcatgaacctcctgagcctggccaacgag
gactctgtccctggggcagatgactttgtccctgtgttggtgtttgtgctgataaaggca
aacccgccctgcctgctgtccaccgtgcagtacatcagcagcttctacgccagctgtctg
tctggagaggaatcgtactggtggatgcagttcacagcagcagtggagttcattaaaacc
atcgacgacaggaagtga
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