Peromyscus leucopus (white-footed mouse): 114704757
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Entry
114704757 CDS
T07241
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
114704757
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pleu04040
]
114704757
Ion channels [BR:
pleu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
114704757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
ATP-synt_B
GPHH
IQ
IQCJ-SCHIP1
FraC
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
114704757
NCBI-ProteinID:
XP_028742397
LinkDB
All DBs
Position
4:42499225..42634863
Genome browser
AA seq
2005 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINITSFFNNSL
DWNGTAFNRTVNMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKRKQKEQAGEEEKEDAVRKSASEDSIRKKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFKGRVKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRPSNVSQASRASRGIPTLPMNGKMHSAVDCNGVVSLVGGP
SALTSPVGQLLPEGTTTETEIRKRKSSSYHVSMDLLEDPSRQRAMSMASILTNTMEELEE
SRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEH
YPMTEQFSNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELGL
ANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGM
QLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCL
TVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQRGIDFVKRK
IREFIEKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIGS
SVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATSS
SEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRKT
CYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLK
WVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRF
EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSVV
NNFSECQALIENNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVELQ
PKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNA
MKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEMT
NILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFV
SPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMS
NFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPGS
SVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYE
VWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFA
FTKRVLGESGEMDALRVQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRYL
LKQKVKKVSSIYKKDKSKEGEGTPIKEDIIIDKLNENSTPEKTDVTPSTTSPPSYDSVTK
PEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6018 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatccgtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagccaagagacccaaacaggaa
cgcaaggatgaagatgacgaaaatggccccaagccaaacagtgacttggaagcaggaaaa
tcccttccttttatttatggagacattcctccagagatggtgtcagagcccctggaggac
ctggacccctactatatcaataagaaaacctttatagtattgaataaagggaaggccatc
tcccggttcagtgccacctccgccctgtacatcctcactcccttcaaccccattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcattatgtgcacaattctt
accaactgtgtatttatgaccatgagtaatcctccagactggacgaagaatgtggagtat
acttttacaggaatttatacttttgaatcacttattaaaatactcgcaaggggcttttgt
ctagaagatttcacatttctacgggacccctggaattggttggatttcacagtcattacc
ttcgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacgttcaga
gttctccgagcattgaaaacaatttcagtcattccaggcctgaagaccatcgtgggggcc
ctgatccagtcggtgaagaagctgtctgacgtcatgatcctcactgtgttctgtctcagt
gtctttgccctaatcggcctgcagctcttcatgggcaacctgaggaataaatgcttgcag
tggcccccagacaattctacctttgaaataaatatcacttccttctttaataactcattg
gactggaatggtactgccttcaatagaacggtgaacatgtttaactgggatgaatatatt
gaagataaaagtcacttttattttttggaagggcaaaatgatgctctgctttgtgggaac
agctctgatgcaggccagtgtcctgaagggtacatctgtgtgaaggctgggcgaaacccc
aactacggctacacgagcttcgacacatttagctgggccttcttgtcgttatttcgtctc
atgactcaagacttctgggaaaacctttatcagctgaccctacgtgctgccgggaaaaca
tatatgatattttttgtgctcgtgattttcttgggctcgttctacctaataaacttgatc
ctggccgtagtggccatggcctatgaggaacagaatcaggccaccttggaggaggctgaa
cagaaagaggcggagtttcagcagatgttggagcagttgaagaagcaacaggaggaggct
caggcagcagccgcagccgcatctgcagaatccagagacttcagcggagcaggtgggata
ggcgtgttctcggagagttcttcggtagcatcaaagctgagttccaagagtgaaaaggag
ctgaaaaacagaagaaagaaaaggaaacagaaagagcaggctggagaggaagaaaaggaa
gacgcggtgcggaaatcggcctctgaggacagcatacgcaagaaaggcttccggttttca
ctagaaggaagtaggctgacctatgagaagaggttttcttctccacaccagtctctattg
agcatccgaggctcccttttctctccaagacgcaacagtagagcaagccttttcagcttc
aaaggtcgagtgaaggatattggttctgaaaatgactttgcagacgatgaacacagcaca
ttcgaggacaatgacagcagaagagactccctgtttgtgccacacagacatggagaaagg
cgtcccagcaatgtcagccaggccagccgtgcctcccgaggaatacctactctacccatg
aatggaaagatgcacagtgcagtggactgcaatggcgtggtgtctctggttggaggccct
tctgccctcacatctcctgtagggcagctactaccagagggcacaactactgaaacagaa
ataagaaagagaaagtccagttcttaccatgtatccatggacttgttggaagacccttcg
aggcaaagagcaatgagtatggccagcattttgaccaacacaatggaagagcttgaagaa
tccagacagaaatgcccaccttgctggtacaaatttgctaatatgtgcctgatttgggac
tgctgtaagccatggttaaaggtaaaacaccttgtcaatctggtagtgatggacccattt
gttgacctggctatcaccatctgcatcgtgttaaatacgctcttcatggccatggagcat
taccccatgacggagcagttcagcaatgtgctgtctgtcgggaatttggtcttcaccggg
atcttcacagcagaaatgttcctcaagataatagctatggatccatattactacttccaa
gaaggctggaatatctttgatggctttattgtaagccttagtttaatggaactcggcttg
gccaacgtggaaggattgtcagttctccgatcattccggctgcttagagtcttcaagttg
gcaaaatcctggcccacactgaatatgctcattaagatcatcggtaactcggtgggtgca
ctgggcaacctgaccctggtgttggccatcattgtcttcatttttgccgtggttggcatg
cagctgtttggaaagagctacaaggagtgcgtctgcaagatttccaatgattgtgagctt
ccgcgctggcacatgcatgacttcttccactccttcctgatcgtgttccgtgtgctgtgt
ggagagtggatagagaccatgtgggactgcatggaggtcgccggccagaccatgtgtctc
acggtcttcatgatggtcatggtgattggcaacctcgtcgttctgaacctcttcctggcc
ttgctcctcagctctttcagctctgacaaccttgccgccacagatgacgataacgaaatg
aacaacctccagatcgcagtgggaaggatgcaaaggggaattgattttgttaaaaggaaa
atacgtgaattcattgagaaagcctttgtcagaaagcagaaagctttggatgaaatcaaa
cccttggaagacctgaataacaagaaagacagctgtatctccaaccacacgaccatagaa
ataggcaaagacctcaattatctcaaagacggaaatgggacgaccagtggcataggcagc
agtgtggagaagtatgtggtagatgagagtgattacatgtcgttcataaacaaccccagc
ctcactgtgactgtgcccattgccgttggagagtctgacttcgaaaacttaaatacagaa
gagttcagcagcgaatcagatatggaggaaagcaaagagaaattgaatgcaactagttca
tctgaaggcagtacagttgatataggtgctccagcagagggagagcagccagaggctgaa
ccagaagaatcccttgagccagaagcctgtttcacagaagactgtgtgagaaagttcaag
tgttgtcagataagcatagaagaaggcaaaggcaagctgtggtggaacttgaggaagacc
tgctacaagatcgtggaacacaattggttcgagaccttcatcgtcttcatgatcctgctc
agcagcggtgctctggcctttgaagacatatatatcgagcagcgaaagaccatcaagacc
atgctggagtatgctgacaaggttttcacttacatcttcatcctggagatgcttctaaag
tgggttgcttatggtttccaaatgtattttaccaatgcctggtgctggctggacttcctg
attgttgatgtatcattggttagcttaactgcaaatgccttgggttattcagaacttggt
gccatcaaatccctcagaacgttaagagctctaaggcctctcagagccttatcccggttt
gaaggaatgagggttgttgtaaatgctcttctgggtgccatcccatccattatgaatgta
cttctggtctgcctgatcttttggctaatattcagtatcatgggagtgaatctctttgct
ggcaagttctatcattgcatcaactataccactggggaaatgtttgacgtgagtgtggtc
aacaacttcagtgagtgccaagcgctcatagagaacaaccagacagccaggtggaagaat
gtgaaagtcaacttcgataatgtgggacttggatatctttctctgcttcaagtagccaca
tttaaaggatggatggacatcatgtatgcagctgttgactcaagaaatgtagaattgcaa
cccaaatatgaagacaatctctacatgtacctttacttcgtcatcttcattattttcggc
tcattcttcacactgaatcttttcattggtgtcatcatagacaacttcaaccaacagaaa
aagaagtttggaggtcaagacatctttatgacagaagaacagaagaaatactacaatgca
atgaagaagctgggatccaagaaacctcaaaaacccatacctcgacctgctaacaaattt
caagggatggtctttgattttgtaactaaacaagtctttgacatcagcatcatgatcctc
atctgcctcaacatggtcaccatgatggtggaaactgacgaccagagtcaggagatgacc
aacatactgtactggatcaacctggtgttcatcgtgctgttcactggcgagtgtgtgctg
aaactcatctccctccgctattactatttcaccattggatggaatatttttgattttgtg
gtggtcattctctccattgtaggaatgtttctggccgagctgatagagaagtactttgtg
tccccaaccctgttccgagtcatccgcttggccaggattggcagaatcctacgcttgatc
aaaggcgccaaggggatccgcacactgctctttgctctgatgatgtcccttcctgcgctg
ttcaacatcggcctcctgcttttcctggtcatgttcatctatgccatctttgggatgtcc
aactttgcctacgttaagagggaagttgggattgatgacatgttcaattttgagaccttc
ggcaacagcatgatctgcctgtttcaaattaccacctctgcaggctgggacggtctactg
gcacctatattaaatagtggacctcccgactgtgatcctgaaaaagatcaccctggaagc
tcggtgaagggggattgtgggaacccatcggtggggattttcttttttgtcagctacatc
atcatatccttcctggttgtggtgaacatgtacatcgccgtcatcctggagaacttcagc
gtcgccactgaggaaagtgcagagcccctgagtgaggacgactttgagatgttctatgag
gtctgggagaagttcgaccctgatgccactcagttcattgagttctgcaagctctctgac
tttgcggctgccctggatcctccccttctcatcgcgaagcccaacaaagtccagctcatt
gccatggatctgcccatggtgagcggagaccgcatccactgcctggacatcttatttgct
tttacaaagcgggttttgggtgagagcggagagatggacgcccttcgagtccagatggaa
gagcggttcatggcttccaacccctccaaagtctcctatgagccgattaccaccacgttg
aaacgcaaacaagaggaggtgtctgccatcgtcattcagagagcgtacaggcgctatctc
ctgaagcagaaggttaagaaagtttcctctatatataaaaaggacaagagcaaagaaggt
gagggaacgcccatcaaagaagacatcatcatcgataaactaaacgagaattcaacccca
gagaaaactgacgtgacaccttccaccacgtctccaccttcctacgacagcgtgaccaaa
cccgagaaggaaaaatttgaaaaggacaaatcggaaaaggaggacaaagggaaagatatc
agggaaagtaaaaagtaa
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