Peromyscus leucopus (white-footed mouse): 114704837
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Entry
114704837 CDS
T07241
Symbol
Sema5b
Name
(RefSeq) semaphorin-5B isoform X1
KO
K06841
semaphorin 5
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
114704837 (Sema5b)
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GFIT
Motif
Pfam:
Sema
TSP_1
TSP1_2
TSP1_spondin
PSI
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
114704837
NCBI-ProteinID:
XP_028742147
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Position
12:complement(60129919..60253595)
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AA seq
1093 aa
AA seq
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MVGPGPLAVSMLLPSLTLLVSHLSSSQDISGELSSEQQLCARKEHPIVAFEDLKPWVSNF
TYPGVRDFSQLALDPSRNQLIVGARNYLFRLSLANVSLLQATEWASSEDTRRSCQSKGKT
EEECQNYVRVLIVSGRKVFMCGTNAFSPVCSSRQVENLSRTIEKINGVARCPYDPRHNST
AVISSQGELYAATVIDFSGRDPAIYRSLGNGPPLRTAQYNSKWLNEPNFVASFDIGLFVY
FFLRENAVEHDCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNE
LQSAFHLPEQDLIYGVFTTNVNSIAASAVCAFNLSAISKAFNGPFRYQENPRAAWIPIAN
PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQPVTPEPCVTQDSVRFSHLVVDL
VQAKDTLYHVLYIGTESGTILKALSTASRNLRGCYLEELHVLPPGRLEPLRSLRILHSAR
ALFVGLSDRVLRVPLERCLTYGSQGACLAARDPYCGWDGKRQHCSTLEDSSNMSLWIQNI
TACPVRNVTRDGGFGPWSPWKPCEHLDGDNSGSCLCRARSCDSPRPRCGGLECLGPAIHI
ANCSRNGAWTTWSSWAQCSTSCGIGFQVRQRTCSNPAPRHGGRICVGKSREERFCNENTP
CPVPIFWASWGSWSKCSSNCGGGVQSRRRACENGNSCPGCGVEFKTCNPEACPEVRRNTP
WTPWLPVNVTQGGTRQEQRFRFTCRAPLPDPHGLQFGKRRTETRTCPADGSGACDTDALV
EDLLRSGSTSPHSLSGGWAAWGPWSSCSRDCELGFRVRKRTCTNPEPRNGGLPCVGDAAE
YQDCNPQACPVRGAWSCWTAWSQCSTSCGGGHYQRTRSCTNPAPSPGEDICLGLHTEEAL
CATQACPEGWSLWSEWGVCTEDGAQSRSRSCEELVPGPGACPGNSSQSRPCPYSEIPVIL
PASSVEETSSCGGFSLIQLVATGVSCFLGSGLLTLAVYLSCQHCRRQSQESTLVHPATPN
HLHYKGGGTPKNEKYTPMEFKTLNKNNLIPDDRANFYPLQQTNVYTTTYYPSPLNKPSFR
PEASPGQRCFPNS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggttggtccaggacccctggctgtctccatgttgctgcccagcctcaccctgctggtg
tcccacctctccagctcccaggacatctccggtgagctcagcagcgagcagcagctgtgt
gcccggaaggagcaccctatcgtggcctttgaagatctgaagccatgggtctccaacttc
acctatcctggagtccgggatttctcccagcttgctcttgacccctccaggaaccagctc
atcgtgggagctaggaactacctcttcagactcagccttgccaatgtttcccttcttcag
gctacagagtgggcctccagtgaggacacacgtcgctcctgccagagcaaagggaagacg
gaggaggagtgtcagaactacgtgcgagtcctgattgtttccggtcggaaggtgttcatg
tgcggcaccaacgccttttccccagtgtgctccagcagacaggtggaaaacctcagccgg
accatcgagaagatcaatggcgtggcccgatgcccctatgacccacgacacaactccacg
gccgtcatctcctcccagggggagctctatgccgctactgtcattgacttctcaggtcgg
gacccagccatctaccgcagcctgggcaatgggcccccgcttcgcacggcccagtataac
tccaaatggctcaatgagccaaatttcgtggcatccttcgacattgggctgtttgtgtat
ttcttcctccgggagaacgcagtggagcatgactgtggacgcactgtgtactctcgggtg
gctcgagtgtgcaagaatgatgtggggggccgtttcctgctggaggacacatggaccacg
ttcatgaaggcccggctcaactgctcccgcccaggagaggtccccttctactataacgag
ctacagagtgccttccacctgcccgagcaggacctcatctacggcgtcttcaccaccaac
gtaaacagcatcgccgcgtccgccgtctgcgccttcaacctcagtgccatctccaaggct
ttcaacggcccgtttcgttaccaggagaaccccagggctgcctggatccctattgccaac
cccatccccaatttccagtgcggcaccctgcctgagactggacccaacgagaacctcacg
gagcgcagcctgcaggatgcacagcggctcttcctgatgagcgaagccgtgcagccggtg
acaccagagccctgtgtcacccaggacagcgtccgcttctcacatctcgtggtagacctc
gtgcaagctaaggacacgctctaccatgtactctacataggcacggagtcaggcaccatc
ctgaaagcgctgtccaccgccagccgcaacctgcggggctgctacctggaggagctgcac
gtgctgccccctgggcgcctggaacctcttcggagcctgcgcatcctgcacagtgcgcgt
gcgctcttcgtgggattgagcgaccgggtgttgcgggtcccgctggagaggtgcctgacc
tacgggagtcagggggcatgcctggcagcgcgggacccgtactgcggctgggacgggaaa
cggcaacattgcagcacactggaggacagttccaacatgagcctctggatccagaacatc
acagcctgtcctgtgcggaacgtgacacgggacgggggctttggcccgtggtcaccatgg
aaaccgtgtgagcacttagatggagacaactcgggttcttgcctgtgccgggccagatcc
tgtgactccccaaggccccgctgtgggggcctggaatgcctggggccagccatccatatc
gccaattgctccaggaatggggcgtggaccacatggtcatcgtgggcacagtgcagcacg
tcctgtgggatcggcttccaggtccgtcagcgaacttgcagcaaccccgcgccccgccac
gggggccgcatctgcgtgggcaagagccgggaggagcggttctgtaatgaaaatacacct
tgtccggtgcccatcttctgggcttcctggggctcctggagcaagtgcagtagcaactgt
ggaggcggcgtgcagtcgcgccgtcgggcctgcgagaatggcaactcctgcccgggctgt
ggcgtggagttcaagacgtgcaaccccgaggcctgcccagaagtgcggcgcaacacaccc
tggacgccctggctgccggtgaacgtgacccagggtggcacacgacaggagcagcgcttc
cgcttcacgtgtcgcgcgccgctgccggacccgcacggcctgcagttcggcaagaggagg
acagagaccaggacctgccccgccgacggcagcggagcctgcgacaccgacgccctggtg
gaggatctgctgcgcagcgggagcacgtccccgcactctctgagcggtggctgggccgcc
tggggcccctggtcatcctgctcccgggactgcgagctgggcttccgcgtccgcaagaga
acgtgtaccaacccggagccccgcaacgggggactgccctgcgtgggagacgctgcagag
taccaagactgcaacccgcaggcttgcccagtgcggggtgcctggtcctgttggaccgca
tggtcccagtgctcaacatcctgcggtggcggccactaccaacgcacccgctcctgcacc
aaccccgcaccgtccccgggtgaggacatctgcctcgggctgcacacggaggaggcgctg
tgtgccacgcaggcctgcccagaaggctggtcactgtggtctgagtggggtgtctgcacg
gaggatggggcccagagcaggagccggagctgtgaggagcttgtcccagggccgggtgcc
tgtcctggcaacagcagccagagccggccctgtccctacagtgagattcctgtcatcctg
cctgcctccagtgtggaggagaccagcagttgtggagggttcagtcttatccagctggta
gccacgggtgtgtcctgcttcctgggctccgggctcttgaccctggcggtgtatctgtct
tgccagcactgccggcgccaatctcaggaatccacgctggtccatcctgccacccctaac
cacctgcactacaagggtggaggcacccccaagaatgagaagtacacccccatggaattc
aagacgctgaacaagaataacttgatccccgacgacagagccaacttctacccattacag
cagaccaacgtgtacacaaccacctactaccccagcccactgaacaagcccagcttccgg
ccagaggcctcgcctggacagcgctgtttccccaacagctga
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