Peromyscus leucopus (white-footed mouse): 114704881
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Entry
114704881 CDS
T07241
Symbol
Atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114704881 (Atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114704881 (Atrx)
03036 Chromosome and associated proteins [BR:
pleu03036
]
114704881 (Atrx)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
114704881 (Atrx)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
114704881 (Atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
114704881
NCBI-ProteinID:
XP_028742214
LinkDB
All DBs
Position
X:complement(65226458..65402097)
Genome browser
AA seq
2473 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEETCSSPRLVMNQSTDKNSGSIINSDMMDNN
KEEGTSTSEKSRSSGSSRSKRKPSIVTKYVESDDEKPVDENVNEKAANENSENITMQSLP
KGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHFQ
KDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKK
CILRNLGRKELSTILDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKVDS
EKSSKVCDQTSKLSPKKNSSSCNGEEKKVDVSCSASVTCTYSALTVPKDMIKKTKKLIET
TSNMNSSYIKFLKQAADNSEMSSAVKLRQLKAFKSVLADIKKAHLSLEEDLNSEIQALDA
IHKEKNTKELKITDAKADTKVRKGEKSCTAEKKDFLKLDARSSIKVTDSEHTPGEEHKAN
KSASGEQKGSGRKDGPQYEPTNTSEDLDMDIVSVPSSVPEDIFDSLENAMEVQCSADYQG
DGTEPELESSSLKLNTSSKDSRGSTKSKTAVRVRKELYVKLTPVSLSNSPMKGADCQEVS
PEKDGRKSSGVTPNSEKCGLEEENSDNEHSVENDVALLLEESDLRRSPRVKTTPLRRQTE
SNRAISNSDEESNETIKEKQKLSVPGRKKDKQNFSDGAAENPKAHKFPKAKQPGIVDQNS
DSDEMLAVLKEISQMSHSSSSDTDINEIQMNHKVETGKDDNGKRKRKNSTSGSDFDIKKG
KSAETSIISKKKRQNYSESSNYDSEVEREIKTMSKIGAARVAKKSVSDKKERDFSEDEKQ
SKKVVDNEGQERVRTAKESLSGATGDAEDKQGDSLSAVEGSVEKGKGTVGSREALCTRQQ
TSVSSDGVEKPSGGEEDVNLDDKRVSKPKLKSKYLRARPCRKVRRSSLDITDRFPKKEQS
EESSEGEKKQSRQETGTRGKKTTDLKEETIKQQYESSSDGTEKLPEGEEMGHFPQGLKQI
KNDSIDAEKKGRKLKEKSLKKKEDASDGVDKLPGKGDSCDSSEDKKNRNRVSRREKKKSS
LPAKRSGKRPECSSSDTEKYSLKGECCDSTDKRPKRTELRERRNLNSKRNTKEIQSGSSS
SDAEGSSEDTKKRKKQRTSAKKKTGNAKAKRRNSLRTSTKRKQADITSSSSDIGDDDQNS
AGEESSDEQKIKPVTENLVLPSHTGFCQSSGDEALPKSAPATVDDDDDDNDPENRIAKKM
LLEEIKANLSSDEDGSSDDEPEGERKRIGKQGEETPGDEAPNQVNSESDSDSEESKKPRY
RHRLLRYKLTESDGESGEEKKTKSKEHKEAKGRNRRKVSSEDSEDTDFQESGVSEEVSES
EDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSHSEEERKEDDDEDEED
EEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREV
IEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVK
KTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEK
WQEGLNDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKL
KEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHC
MVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDY
TALTKFLPPKHEYVLAVRMTAIQCKLYQYYLDHLTGVGNSTEGGRGKAGAKLFQDFQMLS
RIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDEYAKKKKTKGKKGKK
DSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDETGNTPSGSMKLEESKTTSTSNPSSPAP
DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR
EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA
GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ
VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAE
LLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNIPTGTNLPP
VTFSSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQPLEDIISTVWK
ENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMNRRLQQQYN
QQQQQQMTYQQATLSHLMMPKPPNLIMTPSNYQQIDMRGMYQSVAGGMQPPPLQRAPPPM
RSKNPGPSPGKSM
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagcccatgagtgaaagcaagttgaatacattggtgcagaagcttcatgac
ttcctagcacattcatcagaagaatctgaggaaacgtgttcttctccacgacttgtaatg
aaccaaagcacagataaaaacagtggttctataattaactctgatatgatggataataac
aaggaagagggaactagcacctcagaaaaatccaggtcttcaggatcttcacggtcaaag
aggaaaccttcaattgtgacaaaatacgtagagtctgatgatgaaaaacccgtggatgag
aatgtaaatgaaaaagctgctaatgagaattcagaaaatattactatgcaaagcttgcca
aaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgattttaaa
gggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcggagaa
gatggacttcatgggatcgtgagctgcacagcttgtggacaacaggtcaaccattttcaa
aaagattccatttatagacacccttcactgaaagtccttatttgtaagaactgctttaag
tattatatgagtgacgatattagccgtgactcagatggaatggatgaacaatgtagatgg
tgtgcagaaggtgggaacttgatttgttgcgacttctgccataatgccttctgtaagaaa
tgcatcctgcgcaaccttggtcgaaaggagttgtctacaatacttgatgaaaacaatcaa
tggtattgctacatttgtcatcccgagcctctattggacttggttactgcatgtaacagt
gtgtttgagaatttggaacagttgttgcaacaaaataagaagaagataaaggttgacagt
gaaaagagtagtaaagtatgtgaccaaacatccaagttatctccaaagaagaatagttcc
agttgtaatggagaagaaaagaaagtagatgtttcgtgttctgcttctgtaacctgcact
tactcagcactaactgtgcccaaagacatgattaagaagacaaaaaaactgattgagact
acatccaacatgaactccagttacattaagtttctgaagcaggcagcggataattcagaa
atgagttctgctgtgaagttacgtcagcttaaggcttttaaatctgtgttggctgatatc
aagaaggctcatctttcattggaagaagatttgaattcagagatccaagctttggatgct
atacacaaagagaaaaataccaaagagcttaaaatcacagatgcaaaggccgacacaaaa
gtacggaagggggagaaatcctgtactgcagaaaagaaagattttttaaagttagatgct
agatcatcaataaaggtgacagacagtgagcacaccccaggagaagagcacaaagcaaat
aaaagtgctagtggtgaacagaagggttcgggtaggaaagatggacctcagtatgaacct
actaacacttctgaagacttagacatggatattgtgtctgttccttcctcagttcctgaa
gacatttttgacagccttgagaatgctatggaagttcagtgttcagctgattatcaagga
gatgggaccgagccagaactggagagctcatctctaaaacttaacacttcttcaaaagac
agccgaggaagtacgaagtcgaaaacggcagtcagagtaagaaaagagttgtatgttaaa
ctcacccctgtttccctttctaattccccaatgaaaggtgctgactgccaggaagtttca
ccagagaaggatggccgtaaaagttctggggtgacccccaactcagagaaatgtggactg
gaagaggaaaatagtgataacgaacattcagttgaaaatgacgttgcattacttttagaa
gaatctgatcttcgaaggtccccacgtgtaaaaactacaccattgaggagacaaacagaa
tctaatcgtgcaatatcaaattcagatgaagaaagcaatgaaactattaaagaaaaacaa
aagctgtcagttcctggaagaaaaaaggataagcaaaatttttctgacggtgctgccgag
aaccctaaagctcataagtttcccaaagctaagcaaccggggattgtggatcagaattca
gattccgatgaaatgctagcagtccttaaagagataagccagatgagtcacagttcttct
tcagacactgacattaatgaaatacagatgaatcataaagttgaaacagggaaagacgat
aatggaaaaaggaaacggaaaaactctacttctgggtcagattttgacattaaaaaagga
aagtcagctgaaacctctattatctctaaaaagaaacgccaaaactactcagagtcctct
aactatgactcagaggtagagagagagataaaaaccatgagcaaaattggggctgccaga
gtagctaaaaaaagtgtttcagataaaaaagaacgtgacttttctgaagatgagaaacag
agcaaaaaagtagtggataatgaagggcaggaaagagtgaggactgcaaaagagagcttg
tctggagccactggggatgctgaagacaaacagggagatagtttgtctgcagtggaaggt
tcagttgagaaaggcaagggtacagtgggatccagagaggcgctttgtacgaggcagcag
acaagtgtttcctctgatggtgtggaaaagccttcaggaggagaggaggatgtaaatttg
gatgacaaaagagtctctaaacctaaactaaagagtaaatatctgagagccagaccatgt
agaaaagtacggcgttcttcattggatattactgatagatttccaaagaaagaacagagt
gaggaatcttccgaaggtgagaagaagcagagcagacaggaaactggaacgagaggaaag
aaaactacagacttaaaggaagaaacaattaagcaacagtatgagtcttcctctgatggg
actgagaaattgcctgagggagaagaaatgggtcattttcctcaaggcctaaagcaaatc
aagaatgacagcattgatgcagagaagaaaggcagaaaactgaaagagaagtcattgaaa
aagaaggaagacgcatctgatggcgtggataagttgccagggaaaggagatagttgtgac
tcttcagaagataaaaagaacaggaatagagtgtctcggagagagaagaagaaatccagc
ttgcctgcaaagagatccgggaagaggccagagtgttcatcatcagatactgagaaatat
tctttgaaaggagagtgttgtgactctactgataagagaccaaaaagaactgaattgaga
gaaagaagaaatttaaattcaaagagaaataccaaggaaatacagagtggttcatcttct
tctgatgctgagggaagttcagaagatactaaaaagcggaagaaacaaagaacttcagcg
aaaaagaagacaggcaatgccaaggcaaagagaagaaactccttaagaacgagtactaaa
aggaagcaagcagacattacctcttcatcttctgatataggagatgacgatcagaattct
gcaggcgaggagagcagcgatgaacagaaaataaagcctgtgactgaaaatctagtgctg
ccttcacacactggattttgtcaatcttcaggagacgaagccttacctaaatcagcgcct
gccaccgtggatgatgatgacgacgacaatgaccctgagaatagaattgccaagaagatg
cttttagaagaaattaaagccaacctttcctctgatgaggatgggtcttcagatgatgaa
ccagaaggagagagaaaaagaattggaaaacaaggtgaagaaaccccaggagatgaggcc
ccaaatcaagtcaattctgagtcagattcagattctgaagaatctaagaagccaagatac
agacatagacttttgaggtacaaactgactgagagtgatggagaatctggagaagaaaaa
aagacaaagtctaaagaacacaaagaagccaaaggaagaaatagaaggaaggtgagcagt
gaggattcagaagacactgacttccaagagtcaggagttagtgaagaagtcagtgaatct
gaggatgaacaacggcctagaacaaggtctgcaaagaaagcagaattggaagaaaatcag
cggagttataagcagaaaaagaaaagacgacggattaaggttcaagaggattcatccagt
gaaaataagagccattctgaagaagaaaggaaggaagatgatgatgaggatgaggaggat
gaagaggaagaggatgaaaatgatgattctaagtcacctggaaaaggcagaaagaaaatt
cggaagattcttaaagatgataaactaagaacagaaacccagaatgctcttaaagaagag
gaagagagacgaaaacgtattgcagagagggaacgtgagagagagaaattaagagaggtg
atagaaattgaggatgcttcacctaccaagtgtccaataacaaccaaattggttttagat
gaagatgaagaaaccaaagaacctttagtgcaggttcatagaaacatggttataaaattg
aaaccccaccaagtagatggtgttcagtttatgtgggattgctgttgtgagtctgtgaaa
aagacaaagaaatctccaggttcagggtgtattcttgctcactgcatgggccttggtaaa
accttgcaggtggtcagttttcttcacacagttctcttgtgtgacaaactggatttcagt
acggcattagtggtttgtcctcttaacactgctttgaattggatgaatgaatttgagaag
tggcaggagggcttaaatgatgatgaaaaacttgaggtctctgaattagcaaccgtgaaa
cgtcctcaggagagaagttatatgttacagagatggcaagaagatggtggtgttatgatc
ataggatatgaaatgtacagaaatcttgctcaaggaaggaatgtgaagagtcggaaactt
aaagaaatatttaataaagctttagttgatccaggtcctgattttgttgtttgtgatgaa
ggccatattctaaaaaatgaagcatctgctgtttccaaagctatgaactctatacgatca
aggaggaggattattttaacaggaacgccacttcagaataacctaattgagtatcattgc
atggttaactttatcaaggaaaatttgcttggatccatcaaggagttcaggaatagattt
ataaatcctatccaaaatggtcagtgtgcagattctaccatggtggatgtgagagtgatg
aaaaaacgtgctcatattctctatgagatgttagccggatgtgttcagaggaaagattat
acagcattaacaaagttcttacctccaaaacatgaatatgtattagctgtgagaatgact
gctattcaatgcaagctctatcagtactacttagatcacttaacaggtgtaggcaatagc
actgaaggtggaagaggaaaggcaggtgcaaagctctttcaggattttcagatgctaagt
agaatctggactcatccttggtgtttgcagctggactacattagcaaggaaaataagggt
tattttgatgaagatagtatggatgaatttatagcttcagattctgatgaaacctccatg
agcttaagctcagatgagtatgcaaagaagaagaaaacaaagggtaaaaaagggaaaaag
gatagtagctcaagtggaagtggtagtgacaatgacgtggaagtcatcaaagtctggaat
tcaagatctagaggaggtggggaaggaaatgtggatgaaacaggaaacaccccttcaggt
tctatgaagctagaagaaagtaaaactacttccacttctaacccaagtagcccagctcca
gattggtacaaagattttgttacagatgctgatgctgaggttttagagcattctgggaaa
atggtacttctttttgaaattcttcgaatggcagaagaaattggggataaagttcttgtt
tttagccagtcactcatatctctggacttgattgaagattttcttgaattggctagtagg
gagaaaacagaagacaaagataaacctctcatttataaaggtgaagggaagtggctccga
aatattgactattatcgtttggatggttctacgactgcacagtcaaggaagaagtgggct
gaagaatttaatgacgaaaccaatgtgagagggcgattgtttatcatttccaccaaagca
ggatctcttggaattaacctggtagctgctaatagagtaattatatttgatgcttcctgg
aatccatcttatgacatccagagtatattcagagtttatcgctttggacaaactaagcct
gtttatgtatataggttcttagctcagggaaccatggaagataagatttatgatcgacag
gtaacaaagcagtcactatctttccgagttgttgatcaacagcaggttgaacgtcatttt
accatgaatgagcttactgaactttatacttttgagccagacttactagatgaccctaat
tcagaaaagaagaagaaaagggatactcccatgctgccaaaggataccatacttgcagaa
cttcttcagatacataaagaacacattgtaggatatcatgaacatgactcgcttttggac
cacaaagaagaagaagagttgactgaagaagaaagaaaagcagcttgggccgaatatgaa
gcagaaaagaagggactgaccatgcgtttcaacataccaactgggaccaatttaccccct
gtcactttcagctctcaaactccttatattccttttaatttgggagccctgtcagcaatg
agtaatcaacagctggaggaccttattaatcaaggaagagaaaaagttgtagaagcaacg
aacagtgtgacagcagtgaggattcagcctcttgaagatatcatttcaactgtatggaaa
gaaaacatgaatctctccgaggcccaagtacaagcactagcattaagtagacaagccagc
caggagcttgatgtgaaacgcagagaagccatctacaatgatgtattgacaaaacagcag
atgttaatcagctgtgttcagcgaatactcatgaacagaaggctccagcagcagtacaat
cagcagcaacagcaacaaatgacttatcagcaagcaacactgagtcacctcatgatgcca
aagcctccaaatttaatcatgactccttccaactaccagcagattgatatgagaggaatg
tatcagtcagtggctggtggtatgcagccaccacccttacagcgcgcaccgcccccaatg
agaagcaaaaatccaggaccttccccagggaaatcaatgtga
DBGET
integrated database retrieval system
