Peromyscus leucopus (white-footed mouse): 114704920
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Entry
114704920 CDS
T07241
Symbol
Col9a2
Name
(RefSeq) collagen alpha-2(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04151
PI3K-Akt signaling pathway
pleu04510
Focal adhesion
pleu04512
ECM-receptor interaction
pleu04820
Cytoskeleton in muscle cells
pleu04974
Protein digestion and absorption
pleu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
114704920 (Col9a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114704920 (Col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114704920 (Col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114704920 (Col9a2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
114704920 (Col9a2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
114704920 (Col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pleu00535
]
114704920 (Col9a2)
Proteoglycans [BR:
pleu00535
]
Extracellular matrix (ECM) proteoglycans
Others
114704920 (Col9a2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
114704920
NCBI-ProteinID:
XP_028742250
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Position
2:122785280..122802581
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AA seq
688 aa
AA seq
DB search
MTTAPTPRGLVIFLQVLGLALAQIRGPPGEPGPPGPPGPPGVPGSDGIDGDKGPPGKVGP
PGSKGEPGKPGPDGPDGKPGVDGLMGAKGEPGPMGTPGVKGQPGLPGPPGLPGPGFAGPP
GPPGPIGLPGEIGTPGPKGDPGPEGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAG
VKGPQGLQGVKGHPGKRGILGDPGRQGKPGPKGDVGASGEQGIPGPPGPQGTRGYPGMAG
PKGEMGPRGYKGMVGSVGAAGPPGEEGPRGPPGRAGEKGDVGSQGVRGPQGITGPKGTTG
PPGIDGKDGTPGIPGMKGSAGQVGRPGSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGFPG
ISGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGRPGPKGEQGPPGIPGPQG
LPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGQSGEPGPKGQQGVRGEPGYPGPSG
DAGAPGVQGYPGLPGPRGLMGDRGVPGQPGRQGVVGRAASEQHIVDVVLKMIQEQLAEVA
VSAKREALGATGMVGPPGPPGPPGYPGKQGPHGHPGPRGIPGIVGAVGQIGNTGPKGKRG
EKGDQGEMGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGVAGRPGLPGPVGLP
GFCEPAACLGASAYASARLTEPGSIKGP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgctcccacgccccgcggcctggtcattttcctccaggtgctgggactcgcc
ctggctcagatcagaggtccgccgggcgagccgggtcctccagggccaccagggccacca
ggagtgcctggttctgatggcatcgacggtgacaaggggcctccaggaaaagttggtcct
ccgggatccaaaggagagcctggcaaacccgggccggatgggccagatgggaagcccggc
gtggatggtttaatgggcgccaagggagagcctggacccatggggacccctggagtcaag
ggtcagcctggcctcccagggccccctggcctgccgggccccggttttgctggccctccc
ggaccacctggacccattggcctccctggtgagattggaaccccaggccccaagggggac
ccaggaccagagggaccatcagggcccccaggaccccctgggaaaccgggccgaccagga
accatccagggcctggaagggagtgcagatttcctgtgtccaaccaactgtccagctggt
gtgaaaggcccccagggcctgcaaggagtgaaggggcatccaggcaaacgagggattctg
ggtgatcctggtcgccaggggaagccgggccccaagggagatgtgggtgcctctggagaa
caaggcattcctggaccaccgggtccccagggcaccaggggctacccaggcatggcagga
cctaagggagagatgggtcctcgtggatacaaaggcatggtgggctccgtgggggctgct
gggccaccgggtgaagaaggccccagggggccaccaggccgagctggtgagaagggggat
gtgggcagccaaggtgtccgaggaccccaggggataacaggcccaaagggaaccacgggt
cccccaggcattgatggcaaggatgggaccccgggcatacctggcatgaagggcagtgca
ggacaggtggggcggccaggaagcccaggccaccagggcctagcgggtgtgccgggtcag
cctgggacaaaaggaggccccggagacaagggtgaaccaggccagcagggcttccctgga
atctctggtcctccagggaaagaaggggagccagggcctcgaggagaaattggtccgcag
ggcatcatgggacagaagggcgaccagggtgagaggggaccagtaggacagccaggccct
caaggacgaccgggccccaagggagagcagggtcccccgggaattccaggaccccaaggc
ttgccaggcatcaaaggagataagggttccccagggaagaccggtccccgaggcggagtg
ggtgacccaggggtggccggcctcccgggtgagaaaggggagaagggccagtctggagag
ccgggacccaagggacagcaaggagtccgtggagagccaggataccctggccccagtggg
gatgcgggcgctccaggagtgcagggctacccggggcttcctggaccccgaggactgatg
ggagatcgaggcgtgccgggacaacctgggagacaaggtgtagtgggccgagctgccagt
gagcagcacatcgtggacgtggtgctgaagatgattcaagagcaactggcagaggtagct
gtgagtgccaagcgggaagccctgggggcaaccggaatggtgggtcccccaggacctcct
gggccccctggatatccaggcaaacagggaccccatgggcatcctggcccccgaggcatt
cctggcatcgtgggagcagtgggtcagattggcaacactggacccaagggaaagcgtgga
gagaaaggtgaccaaggagaaatgggacgtgggcaccccgggatgcccggacccccaggg
atcccaggtcttcccggccggcctggccaggcaatcaatggcaaggatggagaccgcgga
tccccaggggctccaggggtggctggccgacctggcttgccaggtccggtggggctgccc
gggttctgtgagcctgccgcctgcctgggggcttcagcctatgcctctgctcgcctcacg
gagcctgggtccatcaaggggccatga
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