KEGG   Peromyscus leucopus (white-footed mouse): 114705014
Entry
114705014         CDS       T07241                                 
Symbol
Tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114705014 (Tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pleu03400]
    114705014 (Tdp1)
DNA repair and recombination proteins [BR:pleu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     114705014 (Tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 114705014
NCBI-ProteinID: XP_028742455
LinkDB
Position
14:66795323..66873258
AA seq 608 aa
MSQESSYGRWTISSSDESEDEKSKLDKPSTSCLPQAGQGAVKEPTYTCSEARKAAHKRQL
SPVKFSHTDSVVPPKKPKSDSTEGLGWCLSSSDDEQQPETQQEQPKHMVVQEKKHVSSPN
VTTAQKAVDRSPPASHRPQRADDEYETSGEGQDIWDMLDKGNPFQFYLTRVSGIKAKYNS
KALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRKKPILLVHGDKREAKAHLHA
QAKPYANVSLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIREDWHQKTQGIWLSP
LYPRVDQGNHTSGESSTHFKADLIRYLTAYNDPSLQEWIDTIQEHDLSETNVYLIGSTPG
RFQGSHKDNWGHFRLRKLLRMHAPSVPKGECWPIVGQFSSIGSLGPDESKWLCSEFKESL
LAVAEDGRTPGKSTVPLHLIYPSVENVRTSLEGYPAGGSLPYGIQTAEKQNWLHSYFHKW
SAETSGRSNAMPHIKTYMRLSSDFSRLAWFLVTSANLSKAAWGALEKNGTQLMIRSYELG
VLFLPSAFGLDTFKVKQKFFSSSCEPAASFPVPYDLPPELYGSKDRPWIWNIPYVKAPDT
HGNMWVPS
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgtcccaggagagcagctatgggaggtggacaatatccagtagtgacgaaagcgaggat
gaaaagtccaaacttgacaagccatcaacatcctgtctcccccaggcagggcagggggca
gtgaaggagcccacgtacacctgctcagaggcccgcaaggctgcgcacaagagacagctc
tcacctgtgaaattcagccacacagactcagtggtaccgcccaaaaagccaaagagcgat
tccacagaaggtctcggctggtgtctgtccagcagcgatgatgaacagcagccggagaca
cagcaggaacagcctaagcacatggtggttcaagagaaaaaacatgtctcctcgcccaac
gtgactactgcccagaaagctgtagatcgcagccctcctgccagccataggcctcaaagg
gcagacgatgagtatgagacctcaggggaaggccaggacatctgggacatgctggataaa
gggaaccccttccaattttacctcactcgagtctcagggattaaggccaagtacaactcc
aaagccctccacatcaaggatattttatcccctctgtttgggacccttgtctcttcagct
cagtttaactactgctttgatgtggactggctcgtaaagcagtacccaccagaattcagg
aagaaacccatcttgctcgtgcacggcgataagagagaagccaaggcgcacttgcacgcc
caggcaaaaccctacgcaaacgtttccctgtgccaggcaaaattggatattgcatttgga
acacaccacacgaaaatgatgctcttgctctatgaagaaggcctccgagtcgtcatccac
acctccaacctcatccgggaagactggcaccagaaaacccaaggcatatggttgagccct
ttgtacccacgagttgaccagggaaaccacacatctggagagtcaagcacccattttaaa
gctgacctcatcaggtatttgacggcgtacaatgatccgtctctccaggagtggatagac
accatccaagagcacgatctctctgaaaccaatgtttaccttattggctcaacccctgga
cgctttcaaggaagtcacaaagataactggggacattttaggcttaggaagcttctgcgg
atgcatgccccatctgtacctaaaggcgagtgctggcccattgtgggtcagttttcaagc
attggttccctggggcctgatgagtccaagtggctgtgctcagagtttaaagagagcttg
ttggcagtggcagaggacggcagaactccgggaaaaagtacagttcctcttcatctgatc
tatccttctgtggaaaatgtgcggaccagcttagaaggatatcctgccgggggctctctt
ccctatggcatccagacagctgaaaaacagaattggctgcattcctattttcacaagtgg
tccgcagagacttctggccgaagcaatgccatgccacatattaagacgtacatgaggctc
tcatcagacttcagtagactggcttggtttcttgtgacgagcgcgaatctgtccaaggcc
gcctggggagcactggagaagaacggcacccagctgatgatccgctcctacgagcttggg
gttctcttcctcccgtcggcatttggcctggacaccttcaaagtgaagcagaaattcttc
tccagcagctgtgagccagcggcctcctttccggtgccctatgacctgcccccggagctc
tacgggagtaaagatcggccgtggatctggaacattccttatgtcaaagcacctgataca
cacgggaacatgtgggtgccttcctga

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