Peromyscus leucopus (white-footed mouse): 114705159
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Entry
114705159 CDS
T07241
Symbol
Rttn
Name
(RefSeq) rotatin
KO
K16484
rotatin
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pleu03037
]
114705159 (Rttn)
Cilium and associated proteins [BR:
pleu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114705159 (Rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
TadZ_N
Motif
Other DBs
NCBI-GeneID:
114705159
NCBI-ProteinID:
XP_028742682
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All DBs
Position
19:76189357..76370911
Genome browser
AA seq
2225 aa
AA seq
DB search
MVLPGLIRKLGHQLVEIRERALKSILCKIEHNLICYADLIQERLLFLHLLEWFNFPSVPM
KEEVLNLLSRLVKYPPAVQHLIDLGAVEFLSKLRPHVEPAIQAEIDGILDGLFVLPSEVP
VLCSATYQTDQIELSQQPEVLTGYFSQDKSSFQQMEVPPGPVGNSTVKWLKFSVFPWLPL
TTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPRIVQGLLCLVKLA
FAGDGKHRVALQSVSCLQQLCTCLRNRLNFYRDPNLFSNKQDTISQNSSLSYCHETRGTY
HSPHPSPGSSSPRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVNSRISVRSPLDVAHV
DLPELETEDALELQFQQLSLPQFCISILEAAVPLLRTGSREMIIRVLELLAEDMMLIGQA
ISPEIWNDSSLFAIDVKEKLLQVLGSLGETICYRKTSFNLEQAEALLVHHRMAFISITLF
TVRLLQILLPVEKASEFLPEPMSAALFLVSLDMPISLEYPEFHDTVVAYLEQLDSENYSI
YKRTAEAVYSIECTCNFLSDVGKEGEKNLLELLELADQALRSFSYHHHSPLIKETICICS
KIWKSAQASPLLQGESQKVFLHMLSHPWPQVKVETYQCCLEIVKECLGVHNVTKPVSSLC
SGIHFLLHPKVLYEISAFGIQEPKNEVNAAAKAILLYLLQGRLVMTALTWNKFIESLCPV
IPVLQGYADPEDPLGNCILLLSKASSEAEGILPSTTRLKSVLRLLLVKKPSVRSLALKLL
AFYLTNEEGADTKRPLIDARILSRITNLFIVKKPIDLKLDDRRELVIKLETVEKVYEIFT
SDDVDLVLRKSAAEQLAVILQDIKMHAVVKKLCLIEKIIGYLNECVGQDGKVVECLIQPC
LTLLRKVLYADPVIRVSLSQQSSLLTLLFRVSLIFHEDCTVVTEVGALFCLLLFDEVSRM
DTWSVDPCNKPSLPSVFSLPVSVFRRYHLPVHVIGHHAVSPYAIVLPLSAECLALKPVSD
MLRVAWNLAWYHGSDNLLKQMTSGAKIQEFLDVLQLSTEDILTLRITYTASGLQDCFHSI
VQAGGHRDVRAAITRMSFYLLNDRLSLKDDIGPCGITLKSLAWHTVLNRFLQVLPACTED
EKLLIDIIHFLNKLIKEQRKNPSIGLLQWILELLLRHNPNPLLDLLVLTESQTREEADHI
RTAVRQQLQKELIALLNSLLLVFITVTDRKCLELFYVFQTQLSLKLLQCLRVTDAPHFYG
LPALERTLGGMAHLTAFPGWSAHSPISKPLEICGKYLSGLLEVITSFYVERGGNAMSFMG
KGVTKSTVLCLLHLSHEMMTQAPSSDWMPLWFLPLGSHSEEHAPTQQGLAWLIPLWVDRD
PEVRFTSLGLGSALTTIEAGCVALANSCQNISGGLWGTVVNILLDQSECSVVRREAAFIL
QNLLVVPMPSEVIKNYTWQGPCVHDEDSGLSLVGKPALQALLYHCHFYEHLTQMVKHCYV
GRYTFDLNFSAFTDTSECSDLNGLDDSFKFWRAPSGTSTQDHEPSSLSTSETMVATSVGS
SETQPLLPSTLAPETALDQFVTQGQCETRPVCPRDSPLSAPMHKQCTLVTPSLLSAVCSL
LDNLLAVTPREAASAFQQARLIELLCSTVDASVIEMCIQELKTPPPLSFAVEHSQAQASF
LLEYLSSLSQLLQSCLLVDPNLVTQGELLKPLVTNVIRVLIVCTKDVLDVQLVLAFHRTW
THLFDLLATLLRKASAVSLLLITSTLAEHWEAVIDTLCRCVGLSVRSPALSIASLQFLSV
LLAEEEKRRLQDKDRTNACQAPTVAFLLDGTPESLKFSERLNETILQCYEGKSPKDVLKR
VAANALMSLLAVSRRAQKHALRANLIENCMEQMKHINAQLNLDFLRPGKATLKKKEDGFI
KELSITMQLLRNCLYQNEECKVAALEARLVPVLHSLWPWLLMEDSLMQIALQLLCVYTAN
FPTGCSSLCWSNSGQYVQTAHRGPPSNSLMLCILKLASQMPAENTTIQQMVFMFLSNLAL
SHDCKGVIQKSNFLQHFLSLTLPKGGNKHLSNLAILWLKLLLNISFGEDGQQMILRLDGC
LDLLTEMSKYKHKSSPYIPLLIFHNICFSPANKPKILANEKIVTLLATCLESENQNAQRI
GAASLWALIYNYQKAKATLKSPSIKRRVDEAYSIAKRTFSNSEENPLNAYYLKCLENLVQ
LLNYS
NT seq
6678 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgcccgggctcatcaggaagcttggccatcagctggtggagatcagggaacgc
gccctcaaaagtatcctgtgcaagatcgagcacaatttgatctgctatgctgacctgatt
caggaaaggttgctttttctccatttgctcgaatggttcaatttcccatccgtcccaatg
aaagaggaggttctgaacttgttaagcagattggttaagtatcccccagcggtccaacac
ttgattgaccttggtgcagtggagttcttatctaagctccgtccacatgtggagccagca
atacaggctgagattgatggcattcttgatggactttttgttcttccttcagaagttcct
gtactgtgttctgccacttaccaaactgatcaaatcgaattgtcacagcaacccgaagtt
ctaacaggatatttctcccaagacaaaagtagtttccaacagatggaagtacctccaggg
ccagtaggaaactcgactgtgaagtggctgaagttttctgtatttccttggctacccctg
accacaacagacagacatgttctctcctccaatgaaagctctctgagaagtagtaaccac
accctgatctggaacacatgtgagcttctgaaggacgtgatcatgcaagactttcctgct
gagattttccttcagagaccaaggattgttcagggtctcttgtgtctggtgaagctggcc
tttgcgggagatgggaagcaccgtgtggcgttacagtcggtgtcctgtttgcagcaactg
tgcacgtgtttaaggaacagactcaacttttaccgagaccccaaccttttctcaaataaa
caagatacaatctcccagaattcttctttgtcttactgtcatgaaacaagaggtacttac
cattccccacacccgtctccaggaagcagcagtcctcggccttctgtagttgggcgtact
ggccagaggccccgaggagatggtcaggactgggatgcagtgtcttccagtggaagtagt
agccatgctcatgtgaactctaggatatctgtgcgttctcctttggatgtggcacacgtc
gatctgccggagctggagacagaggatgccctggagctgcagttccagcagcttagtctt
cctcagttctgcatctccatcctggaggcagcagttcctctgctgagaacaggcagcaga
gaaatgatcataagagttctggaactgcttgcagaggacatgatgctcattggacaagca
atttcacctgaaatctggaatgatagcagcctctttgctatagatgtgaaagagaaactg
ctccaggtattgggatcccttggagaaaccatatgttaccgtaaaaccagctttaacttg
gagcaagctgaggctctgcttgtgcaccacaggatggctttcatcagcattacactgttc
acagttcgactgttgcaaatccttctccccgttgaaaaggcgagtgaatttttgccagag
cccatgtcagcagcgttattccttgtctctttggacatgcctatttctttggaatatcca
gagtttcacgacactgttgtggcttatttggaacagctggattctgaaaactacagcatt
tataaacgaactgcagaggctgtttattcaattgaatgtacctgtaactttctgtctgat
gtggggaaagagggagaaaagaatctcctagaattattggagctggcagaccaagccttg
aggagcttttcctatcatcatcattcccccctaataaaggaaaccatctgcatttgttca
aagatctggaaatctgcacaggccagcccgttactgcagggagagagtcagaaggtgttc
ctccatatgctgtctcacccttggccacaggtgaaggtggagacttaccagtgctgtctg
gagattgtgaaggaatgtttaggtgtccataatgtcactaaacctgtatcttcactttgt
agtggaattcattttctgcttcatccaaaagtcttatatgaaatctctgcatttggtatt
caagaacccaaaaatgaggtgaatgctgctgccaaggccattctgttgtatctgcttcag
ggacgattggtgatgacagcactgacctggaacaagtttatcgagtctctctgtcctgtc
attccagtgctacagggctatgctgatccagaagatcctttaggcaactgcattctcctt
ctaagcaaagcgagttctgaagcagaaggcattctcccttctactacccggctgaagtct
gtgctgcgacttttgctagtaaaaaagccttcggttcgttcactagcattaaagctgtta
gcattttatcttaccaatgaagaaggggctgatacaaagcgcccattaatagatgccaga
attctctcccgaattactaatctatttattgtgaaaaaacctattgaccttaaactggat
gacagacgagaactagttattaagctggagactgttgaaaaggtatacgaaatcttcacc
tcagatgatgttgatcttgttttgaggaagtcagctgctgagcaactagctgtaatcttg
caagatattaagatgcatgctgtggtgaaaaagttatgcttaattgagaagataatcggg
tatttaaatgaatgtgtgggtcaagatggcaaggttgtagaatgcttgattcagccatgc
ctcacgctcctgaggaaggttttatatgctgacccagtcatccgtgtttccttgtcacag
caatcttctctcttgaccctgttgttcagagtttccttgatatttcatgaagattgtact
gtggtgactgaagtcggggcattgttttgtcttctcttgtttgatgaggtatcaagaatg
gatacatggtctgttgatccttgtaataaaccttctttgccttcagtcttcagtctgcct
gtttcagtcttcaggaggtatcatttaccagttcatgtgattggccaccatgctgtgagt
ccttatgcaatagttttgccgttgtctgctgagtgcttggccttaaagcccgtgtccgac
atgctaagagtagcttggaacctggcgtggtaccatgggagtgataatctactgaaacaa
atgacctctggagctaaaattcaagaatttttagatgtattgcagctatccacagaagat
atccttacactgaggatcacttacacagctagtgggctgcaagactgctttcactccatt
gttcaggctggaggccacagggatgtgagggctgctatcaccaggatgagtttttatctt
ttgaatgacagactgtctttgaaggatgacattggtccatgtgggattacgttaaaatcc
ttggcttggcacactgtgctaaacaggtttttacaagtgcttcctgcgtgcactgaagat
gagaaactgctaatagacatcatacattttttgaataagttaataaaggaacaaagaaaa
aatccatcaataggacttttacagtggattctagagttacttcttaggcataatccaaac
ccactattagacctgctggttctgacagagtcacaaacacgagaagaggcagatcacatc
cggactgcagtcagacagcagctccagaaagaactgatcgcgcttctcaattccttgttg
ctggttttcatcacagtcaccgacaggaaatgcttggaacttttttatgtcttccaaact
cagttgtctctgaagctgctccagtgcctcagagtcacagatgctcctcatttctatggc
ttgcctgccttggaacggaccttaggagggatggctcacctcactgctttccccgggtgg
agtgcacactctcctatctcaaagccacttgagatttgtgggaaatacttgtcgggtctc
ctggaggtcattacttcattttatgtggaacgtggaggaaatgctatgtccttcatgggc
aaaggtgttacgaagagcacagttctttgcttacttcacttatcccatgagatgatgacc
caggcaccaagctcggattggatgccactttggtttttgcctttgggtagtcacagtgaa
gaacatgctcctactcagcaaggattggcctggctaattcctttatgggttgatcgagac
ccagaggtgagattcacttcactgggattgggatcagcactgactactattgaagctggc
tgtgtggccttggcaaacagttgtcagaatatttctggtgggctctggggaaccgtggtg
aacattcttctggatcagtcagaatgcagtgtggtgcgccgggaggctgcatttattctt
cagaatctccttgtagttccaatgccttcagaagttataaagaattatacttggcagggc
ccctgtgttcatgatgaggattctggcctgtcactggtaggaaaacctgccctccaggcc
cttttatatcattgccatttctatgagcatttgactcagatggtgaaacattgttatgta
ggaagatatacgtttgatttgaacttttctgcttttactgacacttcagaatgcagtgat
ttaaatggtttagatgactcattcaagttttggagggctccctcagggacatctactcag
gatcatgagccaagctctctttccacctcagaaacaatggtggcgacctcagtgggcagc
agtgagactcagcctctgttgccatcgacactcgctcctgaaaccgcacttgaccagttt
gtgactcaaggtcaatgtgaaaccagacccgtgtgccctcgtgactcgccgctgtctgct
cctatgcacaagcagtgcacgcttgttaccccgtctctcctgtcagcggtctgtagcctc
ttagacaacctcttggcagttactcctagagaagctgcaagtgcttttcaacaagcccgc
ctcatagagcttctctgtagtactgtggatgcctctgtcatagagatgtgcatccaggaa
ctcaagaccccgccacccttatcatttgctgttgaacattctcaggctcaggcttccttt
ctcttggaatacctgtcctctttgtcccagcttctgcagtcctgtctgttggtagatcct
aaccttgtgacacagggtgagctcttgaaacctcttgtcactaatgtcatccgagttctc
attgtgtgcaccaaagatgtattagatgtacagttagtattggcttttcatcgcacatgg
acacacttatttgaccttctggccacactcctgaggaaagctagtgctgtttcccttctt
cttattacctcaactcttgccgagcactgggaggcagtgattgatacattgtgcagatgt
gtgggcttgtcagtcaggtcccctgccttgagtattgccagcctccagttcctgtctgtt
ctcttggcggaggaggaaaagaggcgtctgcaggacaaggacagaacaaacgcatgccag
gccccaacagtggcttttcttcttgatggaactccggaaagtcttaaattttcagagcga
cttaatgaaacaattcttcagtgctatgaaggaaaatctcccaaagatgtcctgaaaaga
gttgctgcaaatgctctgatgtcacttctggctgtcagcagacgagcacagaagcatgct
ttgagagctaatctcatagagaactgcatggagcagatgaagcatatcaatgcacaactg
aacctggattttctgaggccggggaaagcaacactgaaaaaaaaggaggatggctttatt
aaagagttaagcattactatgcagctcctaaggaattgcctttatcaaaatgaagaatgt
aaagtggctgctcttgaagcacgtcttgtgcccgttctgcactctctttggccttggctt
ttgatggaggattcattgatgcaaattgccttgcagttgctttgtgtctatactgctaat
tttccaactggctgcagttctctttgttggtcaaattctggacaatatgtgcaaactgcc
cacagaggcccccccagcaactccctgatgctgtgtatcctgaagcttgcttctcagatg
cctgcagagaacaccaccattcagcagatggtttttatgtttctttcaaacctggcctta
tctcatgactgcaagggagtaattcagaagagcaacttcctacagcacttcctgtctctc
acattgcctaaaggaggaaataaacatctcagcaatctggccattctgtggttgaagtta
ctcctgaatatatcatttggagaagatggacagcaaatgatcctgaggctggatggctgc
ttagacttactcacagagatgagcaaatacaagcacaagagcagcccttacatacctctg
ctgatttttcataacatttgcttcagtcctgctaataagcctaaaatcctggctaatgaa
aaaattgttactcttttggctacctgtttagaaagtgagaatcaaaatgcccagaggatt
ggagcggcttcactttgggctctaatttacaattatcaaaaggcaaaagcaactttgaaa
agtccatcaataaaaagaagagtagatgaagcatattccatagcaaagagaactttctcc
aattcagaagaaaaccctctaaatgcctactatttgaaatgccttgaaaatcttgtacag
ctgcttaactattcctga
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integrated database retrieval system
