Peromyscus leucopus (white-footed mouse): 114705195
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Entry
114705195 CDS
T07241
Symbol
Col7a1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04382
Cornified envelope formation
pleu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
114705195 (Col7a1)
09158 Development and regeneration
04382 Cornified envelope formation
114705195 (Col7a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
Pur_ac_phosph_N
VWA_2
Kunitz_BPTI
Ig_DSCAM-DSCAML_C
DUF4992
Motif
Other DBs
NCBI-GeneID:
114705195
NCBI-ProteinID:
XP_028742762
LinkDB
All DBs
Position
7:97804342..97836601
Genome browser
AA seq
2950 aa
AA seq
DB search
MRLRLLVAALCAAEILVGAPGVWAQPRDRVTCTRLYAADIVFLLDGSSSIGRSNFREVRG
FLEGLVLPFSGAASAQGVRFATVQYSDDPQTEFGLDALGSGGDTIRAIRELSYKGGNTRT
GAALHHVSDHVFLPHLTRPGIPKVCILITDGKSQDLVDTAAQKLKGQGVKLFAVGIKNAD
PEELKRIASQPTSDFFFFVNDFSILRTLLPLISRRVCTTAGGVPVTLPPDGTSSGPRDLV
LSEPSSQSLRIQWTAASGPVTGYKVQYTPLTGLGQPLPSERQEVNVPAGETSMRLQGLRP
QTEYQVTVVALYANSIGEAVSGTARTTAEEGLELSIRNITSHSLLVAWRRVPGATGYRVA
WRDLVVSEGRGGVTQQQDVXPGQGSAFLHHLEPGTDYEVTVSALFGRSVGPPTSLTARTD
PSVEQTLNAVILSPTSILLSWNLVPEARGYRLEWRREGGLEPPQKVVLPSDVTRHQLDGL
QPGTEYRLTLYTLLEGREVATPATVVPTGPERPASEVMNLQAIELPGQRVRVSWNPVPGX
TEYRVTMRSTQGVERTLLLPGSQTAFDLDDVRAGIGYTVRVSARVGTHEGDASVLTIRRD
PETQLTVPGLRVVASDATRIRVAWGPVPGASGFRISWRTGSGPESSQTVTPDSTATDILG
LQPGTSYHVAVSALRGREEGPPAVIVARTDALGPVRRVHLTQAGSSSISIAWTGVPGATG
YRVSWHSGHGPEKSQLVSGEATVAEIDGLEPDTEYTVRVRTHVAGVDGAPASVVVRTAPE
PVGSVSKLQILNASSDVLRVTWVGVPGATAYXMAWGRSEGGPMRHQILPGNKDSAEIRGL
EGGVSYSVRVTALVGDREGAPVSIVVTTPPEAPTSLETLQVVQRGEHSLRLRWERVPGAL
GYRLHWQPEGGQEQSLTLRPESNSYSLDGLEPATLYHVWLSVLGQTGEGPPRKVSAHTEP
SRVLSTELRVVDTSIDSVTLAWTPVPEASSYILSWRPLGGTGQAVPGAPQTLPGISSSHR
VTGLEPGISYVFSLAPIQRGVRGPEVSVTQKPVCPHGQMDVVFLLHTTRDNAHNAEAVRR
VLERLVSALGPLGPHAAQVGLLTYSHRPSPLFPLNSSHDLGIILQKIRDIPYVDPSGNNL
GTAVITAHSHLLAPNAPGRRHQVPGIMVLLVDEPLRGDIFSPIREVQASGVKVMILGLAG
ADPEQLRRLAPGLDPVQNFFAMDNGPSLDRATSDLAIALCQAAVTTQPQPEPCAVHCPKG
QKGEPGVTGLQGQAGPPGPPGLPGRTGAPGPQGPPGSSQAKGERGFPGPEGPPGSPGLAG
VPGSPGTKGSPGWPGPRGEPGERGPRGPKGEPGEPGKVNGGKEPGLPGKKGDPGPSGPAG
PRGPLGEPGPRGAPGIPGTSVKGDKGDRGERGPPGPGIGGAGQGEPGLPGLPGSPGPQGP
AGRTGEKGEKGDCEDGAPGLPGQPGAPGEPGLRGAPGITGPKGDRGQTGTPGEPGEKGER
GPPGPVGSQGLPGVAGHPGVEGLEGPPGPAGRRGEKGEPGRPGDPAVGPGGAGAKGEKGD
AGLPGPRGAAGLRGEQGPPGLGLPGDPGPKGDPGDRGPVGLTGRAGPTGDSGPPGEKGDP
GRPGPPGPIGPRGRDGEAGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDP
GEDGRNGSPGPSGPKGDRGEPGPPGPPGRLVDAGIGPRDKGEPGQEGPRGPKGDPGPPGA
SGERGMDGLRGPPGPQGDPGVRGPAGDKGDRGPPGLDGRSGVDGKPGAAGPPGPHGASGK
AGDPGRDGLPGLRGEHGPPGPPGAPGVPGKAGEDGKPGLTGKNGEPGDPGEDGRKGEKGD
SGAPGREGPDGPKGERGAPGNPGLQGPPGLPGQVGPPGQGFPGVPGSAGPKGDRGETGSK
GEQGLPGERGLRGEPGSLPNAERLLETVGIKVSALRDIVETWGESSGSFLPVPERRPGPK
GDPGERGPPGKEGSIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGI
PGLPGRAGGAGEAGRPGERGERGEKGDRGEQGRDGLPGLPGPPGPPGPKVAIDEAGPGPS
REQGPPGLKGAKGEPGSDGDRGPKGDRGVPGAKGDQGEPGKRGHDGSPGLPGERGVAGPE
GKPGLQGPRGTPGPAGGHGDPGPPGPRXGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPT
GAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGPPGRDGTSGKDGDRGGPGVPGLPGLP
GPVGPKGEPGPVGAPGQAVVGPPGAKGEKGAPGDLAGALLGEPGAKGDRGLPGPRGEKGE
AGRAGEPGDPGEDGQKGAPGLKGLKGEPGIGVQGPPGPAGPPGMKGDSGSPGAPGVPGVV
GFPGQPGPRGEMGQPGPVGERGLAGPPGREGAPGPLGPPGPPGSGGAPGTSGLKGDKGDP
GAGLPGPRGERGEPGVRGEDGHPGQEGPRGLMGPPGSRGDRGEKGDAGTAGPKGDKGDSV
VIEGPPGPRGAKGDMGERGPRGMDGDKGPRGDSGNPGDKGSKGEPGDKGSAGSIGVRGLT
GPKGEPGAAGIPGEPGAPGKDGAPGFRGDKGDIGFTGPRGLKGERGMKGACGFDGDKGDK
GEAGFPGRPGLAGRKGDTGEPGIPGQPGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGER
GPPGVGGFPGPRGNDGPSGPPGPPGGGGPKGPEGLQGQKGERGPPGESVVGAPGAPGAPG
ERGEQGRPGPAGPRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSRPLSSYAADT
AGPQLHPVPVLRVSHVEEEGRVPPEDDDDFSEYSVYSVEDYQDPEVPWDGDGDIKGWDQR
GSDPCSLPLDEGSCTAYTLRWYHRAVPGGTACHPFVYGGCGGNANRFGTREACERRCPPQ
VVHSQKTGAA
NT seq
8853 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcggctcctggtcgctgcgctctgcgctgccgagatcctggtgggggcgccc
ggagtgtgggcccagcccagagatagagtgacctgcacgcgcctttacgccgctgacatc
gtgttcttactcgatggctcttcatccattggccgcagcaacttccgcgaagtgcgagga
ttcctggaggggctggtactgcctttctcaggggcagccagtgcgcagggtgtccgattt
gccacagtgcagtacagtgatgacccacaaacagaatttggtctggatgcactcggctct
ggaggtgacaccatccgtgccatccgggaactcagctacaagggtggaaacacccgtaca
ggggccgctctccaccatgtttctgaccacgtcttcttgccccatctaacacgacctggc
atccccaaggtctgcatcctgatcacagatgggaagtcccaagacttagtggacacagct
gcccagaaactcaaggggcagggagtgaagctgtttgccgtgggaatcaagaatgctgac
cccgaggagctgaagcggattgcgtcacagccaaccagtgacttcttcttcttcgtcaat
gacttcagcatcttgaggaccctattgcccctcatttcccggagggtgtgtacaactgct
ggtggtgtccctgtgactctgcctccggatggcacttcatctgggccccgggacctggtg
ctgtcggagccaagtagtcaatccttgcgaatacagtggacagcggctagtggccctgtg
accggctacaaggttcagtacacccctctgacagggctgggacagccactgccaagtgag
cgacaggaggtgaacgtcccagccggtgagaccagcatgcgactacaaggtctccggcca
caaactgaataccaagtgaccgtggttgccctctacgccaacagcatcggggaggccgtg
agtgggacagctcggaccactgccgaggaagggctggagctgagcatccggaacatcaca
tcccacagcctcctggtggcctggaggagagtgccaggtgccactggttaccgggtagca
tggcgggacctcgtggtaagtgaggggcgtggtggggtgacacaacagcaggacgtgnag
cctggacaggggtcagcgtttttacatcacttggagcctggcacagactacgaggtgacc
gtgagcgccctatttggccgcagcgtgggacctcccacttctctgactgcccgcactgat
ccctcggttgagcagaccctgaacgctgtcatcctaagccccacatccatcctcctgtcc
tggaacttggtgccggaggcccgtggctaccggttggagtggcgtcgtgagggtggcttg
gaaccaccacagaaagtggtgctgccctctgatgtgacccgccaccagttggatgggttg
cagcccggcactgagtatcgcctcacgctctacactctgctggagggccgggaggtggcc
actcctgcaaccgtggttcctactgggccagagcggccggccagtgaggtgatgaattta
caagccatagaactgccggggcagcgcgtgcgagtgtcttggaaccccgtcccagggncc
actgagtaccgcgtcaccatgcgtagcacccagggggttgagcggaccctgttgcttcct
ggcagtcagacagcctttgacttagatgatgttcgagctgggattggctacacagtgcgg
gtgtctgcccgagtgggcactcacgagggtgacgccagcgtcctcaccatccgcagagat
ccagaaacccagcttactgttccaggactgcgggttgtggcatcagacgccacgagaatc
agagtggcctggggacccgtccctggagccagtggatttcggattagctggaggacgggc
agtggtccagagtccagccagacagtgaccccggactctactgccacagacatcctgggg
ctgcagcctggaacgtcttatcacgtggctgtgtcagcacttcgagggagagaggagggc
ccccctgcggtcatcgtggctcgaactgatgccctgggcccggtgaggagagtccacctg
actcaggccggcagctcgtctatcagcattgcctggaccggggttcctggggccacagga
tacagggtttcctggcactcaggccacggtccagagaaatctcagttggtttctggggaa
gccacagtggctgaaatcgatgggctggagccagacacggagtataccgtgcgtgtgaga
acccatgtagctggtgtggatggggcccctgcctctgtggttgtgaggactgcccccgag
cccgtgggcagtgtgtcaaaactgcagatccttaatgcttccagtgatgttctacgggtc
acttgggtaggagtcccgggagccacagcctacnagatggcgtggggacggagtgaaggt
ggccctatgagacaccagatactcccaggaaacaaggactctgcagagatccgaggtctc
gaaggcggggtcagctactcagtgagagtgacagcacttgttggggaccgagagggtgca
ccggtctccattgtcgtcaccacaccgcccgaggctccgacatctctggagactcttcaa
gtagtgcagcgtggagaacactccttgaggctgcgctgggagcgggtacccggagcgctg
ggctaccgtctgcactggcaacctgagggtggccaggaacagtccctaaccttgagacct
gagtctaacagctacagcctggatggactggagccagcaacactataccatgtgtggctg
agtgtcctggggcagactggagaaggaccccctaggaaggtgtcggcacacactgagccc
tctcgtgtcctgagcactgaactacgtgtggtggacacctctattgactcagtgactttg
gcctggaccccagtgcctgaggcttccagctacatcttgtcctggaggccactgggagga
actggccaggcagtgcctggggctccacagacgctgccagggatctcaagctcccacagg
gtgacagggttagaacctggcatttcctatgtcttctctctggcacctatccagaggggt
gtacgaggtcctgaggtctctgtcacacaaaagccagtgtgtccccatggccagatggat
gtggtgttcctgttgcataccactcgagacaatgctcacaatgcagaggctgtaaggagg
gtcctggagaggctggtgtctgcactcgggcctcttggtccacacgctgctcaggttggc
ctgctgacctacagtcaccggccctccccattgttcccactgaatagttcccacgatctt
ggcatcatcttgcaaaagatccgggacatcccgtatgtagacccaagtggaaacaaccta
ggcacagctgtgatcacagctcatagccacctcttggcacccaacgctcctggtcgccgt
catcaagtgccagggataatggtcctattagtggacgagccactgagaggggacatattt
agccccattcgtgaggtccaggcttctggggtcaaggtgatgatattgggcttggcgggc
gctgacccagagcagcttcgacgcttggcaccaggcctggaccccgtccagaacttcttt
gccatggataatggcccaagcttggaccgagcaaccagtgatctggcaatagccctgtgt
caggcagctgtgaccacacagccacaaccggagccctgtgctgtgcattgtccaaagggt
cagaagggggagcctggagtgacgggactgcaaggacaagctggacctcctggtccccct
ggtctcccgggcaggacgggtgctcccggcccacagggcccccctggaagtagccaggca
aaaggcgagaggggctttcctggcccagaagggcctccaggcagtcccggccttgctggt
gttcctgggtctcctggcactaagggctccccggggtggcccggccctcgtggggaaccg
ggagagcgagggcctcgaggcccaaagggggagccgggggagcctgggaaagtcaatgga
ggtaaagagccagggcttcctggaaagaaaggagaccctggaccttcgggccccgctgga
cctcgtggccctttgggggaaccaggaccccgtggtgccccagggattcctggaacatca
gtgaagggtgacaaaggtgatcgtggggaacggggtcccccaggaccagggattggtggc
gctggacaaggcgagcctggacttccaggtcttcctggaagccctggaccccaaggccca
gctggtcgcactggagagaagggagagaagggtgactgtgaggatggagcccccggcctt
ccaggacaacctggggccccaggtgaaccgggcctacggggagctcctggaattactggg
cccaaaggtgaccggggacagacagggaccccgggtgagcctggagaaaagggtgaacgc
ggaccacctggtccagtgggatcccaggggctccccggggttgctggacatccgggagtg
gaaggtcttgaggggccaccaggacccgccggccgcagaggagaaaagggagagcctggt
cgccctggggatcctgcagtgggtcctggtggtgctggagccaaaggagaaaagggagat
gctgggctccctgggccgagaggagcggctggactcagaggggaacaaggcccacccggg
ttgggtcttcctggagaccctggccccaaaggagaccctggagaccggggtcccgtaggc
ctcactggcagagcaggacccacaggtgactcggggcctcctggagagaagggagatcct
gggcgacctggccccccaggacctattggcccccgaggaagagatggtgaagctggagag
aaaggcgacgagggtcccccgggtgacccaggtttgcctggaaaagcaggcgagcgtggc
ctccggggggcacccggggtccgggggcctgtgggtgagaaaggcgatcagggagaccct
ggagaagatggacggaatggcagccctggaccatctggacccaagggtgaccgtggagag
ccgggccccccaggtccccctggacggctggtggatgcaggaattggaccccgagacaag
ggagaacctgggcaggaaggtcctcgaggacccaagggtgaccctggcccccctggagcc
tctggagagaggggcatggatgggcttcggggaccccccggcccacagggagacccaggc
gtccgaggccctgcaggggacaagggtgatcggggccctccagggctggatggccggagt
ggggtggatgggaaaccaggggcagctggccccccagggccacatggtgcttcaggcaaa
gctggggaccctgggagagatgggcttccaggccttcgaggagaacatggcccccctggt
ccccctggcgctcctggagtaccgggaaaggcaggcgaggatggcaaaccgggcctgact
gggaaaaacggagagcctggagaccctggagaggatggaaggaagggggaaaagggagat
tctggtgcccctggaagagaaggtcctgatggtcccaagggtgaacgtggagctcctggt
aatcctggactccagggtcctccgggtctcccagggcaggtcggtcctcctggccagggt
ttccctggtgtcccaggaagtgcaggtcccaagggtgaccgtggagagaccgggtccaaa
ggggagcagggccttcctggagaacgtggcctccgcggagaacctgggagcttgccgaat
gcagagaggctgctggaaactgttggcatcaaggtgtcggccttgcgggacattgtggag
acctggggtgagagttctggcagcttcctgcccgtgcctgagcggagacctggccccaag
ggggaccctggtgagcgaggccctccgggcaaggagggctccattggctttcctggagaa
cgcgggctgaagggagatcgtggagaccctggcccgcagggacctcctggcttggccctc
ggggagaggggcccacctggaccacctggccttgctggagaacctggaaagcctggcatt
cctggactcccaggccgggctggtggtgccggggaggcaggaaggccaggagagaggggc
gaacgcggagagaaaggagaccgtggagaacagggcagagatggccttcctggcctccct
ggaccacctggcccccctggccccaaggtggccattgatgaggcaggtcctggaccctct
agagaacaaggaccccctggactcaagggtgctaagggggagccaggcagtgatggtgac
cgtggacccaaaggagacagaggtgtgccaggagccaaaggagaccagggagagcctggg
aagaggggtcatgacggcagcccgggtcttccgggagagcgcggtgtggctgggcctgaa
gggaagccgggtctgcagggcccgagggggacccctggcccagcgggtggccatggagac
cctggaccaccgggtccccggtgaggtcttgctggccctgcaggaccccagggaccttca
ggcctgaagggggaacctggagagacaggacccccaggacggggtctgcccggacctact
ggagctgtgggacttcctggccctcctggcccttcaggccttgtggggccacaaggatca
ccaggcttacctggacaagtgggggagacggggaagccaggccccccaggtcgtgatggt
accagtggaaaggatggagacaggggaggtcctggtgtgccagggttaccgggtctgcct
ggccctgttggacctaaaggagaacctgggcctgtgggggcccctggacaggcggtggtc
gggccccctggagcaaaaggggagaagggagccccaggagaccttgctggagccctgctg
ggtgagccgggagccaaaggcgacagaggattgccaggaccacggggtgagaaaggcgaa
gctggccgtgcaggagagcctggagaccctggggaagatggtcaaaaaggggccccagga
ctcaaaggtctcaagggtgagccaggaattggggttcagggcccccctgggccagctggt
cctccaggtatgaagggagactcaggctcccctggtgcccctggggttcctggtgttgtt
gggttccctggtcagccaggacctcgaggagagatgggccagccagggcctgtcggggaa
cggggtctggcaggccctccagggagagaaggtgccccaggtcccttggggccacctgga
ccaccagggtcagggggagcacccggcacctctggactcaaaggagacaagggagaccca
ggagcagggctgcccgggccccggggcgagcgtggtgagccaggtgtccggggtgaagac
ggccaccctggccaggaaggacctcgaggactcatggggcctcctggcagccggggagat
cgaggggagaagggtgacgctgggaccgcaggaccaaagggcgacaagggtgactcagtc
gtgattgaggggcctccagggccacgaggtgccaaaggggacatgggtgaacgagggcct
cgaggcatggacggtgacaaaggacctcggggagacagtgggaatcctggcgacaagggc
tccaaaggggagccaggggacaaaggttcggctggatcaattggggttcgaggactcaca
ggacccaagggggaaccaggtgctgcagggatccctggtgagccgggagccccaggaaag
gatggagcccctggtttccgaggagacaaaggagacattggctttacgggtccccggggc
ctcaagggtgaaagaggaatgaagggagcctgtggctttgatggggacaaaggagacaag
ggagaagctggttttcctggccgccccgggttggcaggacggaaaggcgacacaggggag
cctggtattccgggtcagcctggggctcctggcaaagagggcctgattggtcccaagggt
gacagaggctttgatgggcagccaggtcccaagggtgaccaaggcgagaaaggggagcgg
gggcccccaggagttgggggcttcccaggtcccagggggaatgatggccctagcggtccc
ccagggccacctggtggtggtggtcccaaaggccctgaaggacttcagggtcagaagggc
gagcgaggtccccctggagagagtgtggtgggggctcctggtgctcctggcgcccccggt
gagagaggagagcaggggcgaccaggacctgctggccctcgcggggagaagggagaagct
gcgctgaccgaggatgacatccggggctttgtgcgtcaggagatgagtcagcattgtgcc
tgccagggccagtttattgcgtctggatcacgacccctctccagctacgctgcggacaca
gctggcccccagcttcaccctgtgcctgtgctccgggtctctcatgtagaggaggaaggc
cgggtaccccctgaagacgatgacgacttctctgagtactcggtgtattctgtggaggac
taccaggacccagaagttccttgggatggcgatggtgatatcaagggctgggaccagaga
ggttcagacccctgctccctaccactggatgagggctcctgtactgcctacaccctgcgc
tggtaccatcgagctgtgcctggtggcacagcctgtcacccctttgtctacggtggctgc
ggagggaatgccaaccgttttggaacccgtgaggcatgtgagcgccgctgcccaccccaa
gtggtccacagccagaaaacaggtgctgcctag
DBGET
integrated database retrieval system
