KEGG   Peromyscus leucopus (white-footed mouse): 114705645
Entry
114705645         CDS       T07241                                 
Symbol
Hdac1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu03082  ATP-dependent chromatin remodeling
pleu03083  Polycomb repressive complex
pleu04110  Cell cycle
pleu04213  Longevity regulating pathway - multiple species
pleu04330  Notch signaling pathway
pleu04350  TGF-beta signaling pathway
pleu04613  Neutrophil extracellular trap formation
pleu04919  Thyroid hormone signaling pathway
pleu05016  Huntington disease
pleu05031  Amphetamine addiction
pleu05034  Alcoholism
pleu05165  Human papillomavirus infection
pleu05169  Epstein-Barr virus infection
pleu05200  Pathways in cancer
pleu05202  Transcriptional misregulation in cancer
pleu05203  Viral carcinogenesis
pleu05206  MicroRNAs in cancer
pleu05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114705645 (Hdac1)
   03083 Polycomb repressive complex
    114705645 (Hdac1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    114705645 (Hdac1)
   04350 TGF-beta signaling pathway
    114705645 (Hdac1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    114705645 (Hdac1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    114705645 (Hdac1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    114705645 (Hdac1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    114705645 (Hdac1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    114705645 (Hdac1)
   05202 Transcriptional misregulation in cancer
    114705645 (Hdac1)
   05206 MicroRNAs in cancer
    114705645 (Hdac1)
   05203 Viral carcinogenesis
    114705645 (Hdac1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    114705645 (Hdac1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    114705645 (Hdac1)
   05165 Human papillomavirus infection
    114705645 (Hdac1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    114705645 (Hdac1)
  09165 Substance dependence
   05031 Amphetamine addiction
    114705645 (Hdac1)
   05034 Alcoholism
    114705645 (Hdac1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pleu03036]
    114705645 (Hdac1)
Enzymes [BR:pleu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     114705645 (Hdac1)
Chromosome and associated proteins [BR:pleu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     114705645 (Hdac1)
   HDAC complexes
    Sin3A-HDAC complex
     114705645 (Hdac1)
    BRAF-HDAC complex
     114705645 (Hdac1)
    REST complex
     114705645 (Hdac1)
    SHIP complex
     114705645 (Hdac1)
    MiDAC complex
     114705645 (Hdac1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     114705645 (Hdac1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114705645 (Hdac1)
  Chromatin remodeling factors
   NuRD complex
    114705645 (Hdac1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 114705645
NCBI-ProteinID: XP_028743438
LinkDB
Position
2:complement(130291719..130317272)
AA seq 482 aa
MAQTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVK
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcaccaagaggaaagtctgttattactacgatggtgatgttgga
aactactattatggacaaggccacccgatgaagcctcaccgaatccgcatgactcacaat
ttgctgctcaactatggtctctaccgaaaaatggaaatctatcgtcctcacaaagctaat
gctgaggagatgaccaagtaccacagtgatgactacattaagttcttacgttccattcgc
ccagataacatgtctgagtacagcaagcagatgcagagattcaacgttggtgaggactgt
ccagtgtttgatggcttgtttgagttctgccagctgtctactggtggctctgtggcaagt
gctgtgaaactgaataagcagcagacggacatcgctgtgaactgggctgggggtctgcat
catgcaaagaagtctgaagcatctggtttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccatggc
gatggtgtggaagaggccttctacaccacggaccgggtcatgactgtgtcctttcataag
tacggagagtacttcccaggaactggggacctacgggatattggggctggcaaaggcaag
tactatgctgttaactaccccctccgagatgggatcgatgatgagtcctatgaagccatt
ttcaagccagtcatgtccaaagtaatggagatgttccagcctagtgcagtggtcttacag
tgtggctcagattccctatctggagatcggttaggttgtttcaatctaaccatcaaaggg
catgccaagtgtgtggagtttgttaagagtttcaacttgcctatgctaatgctgggagga
ggtggatataccatccgtaatgttgctcggtgttggacttacgaaacagccgtggccctg
gacacagagatccctaatgaactgccatacaatgactactttgaatactttggaccggac
ttcaagcttcacatcagcccttctaatatgactaaccagaacactaatgaatatctggaa
aagatcaagcagcggctctttgagaacttgagaatgctgccccatgcgcctggtgtccaa
atgcaggcaatccctgaggatgccatcccagaggagagtggtgacgaggacgaagaagac
cctgacaaacgcatttccatctgctcctctgacaaacggattgcctgtgaggaagaattc
tccgattcagatgaggagggagaaggtggtcgtaagaactcttctaatttcaaaaaagcc
aaaagagtcaaaacagaggatgaaaaagaaaaagatccagaagagaaaaaagaagtcaca
gaagaggagaaaaccaaggaggagaagccagaagccaaaggggtcaaagaagaggtcaag
ttagcctga

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