Peromyscus leucopus (white-footed mouse): 114706135
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Entry
114706135 CDS
T07241
Symbol
Vps52
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pleu04131
]
114706135 (Vps52)
Membrane trafficking [BR:
pleu04131
]
Protein recycling
Others
EARP complex
114706135 (Vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
114706135 (Vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Dor1
COG6_N
Sec3_C-term
Rubis-subs-bind
ATG16
Motif
Other DBs
NCBI-GeneID:
114706135
NCBI-ProteinID:
XP_028744220
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All DBs
Position
16_21:complement(9734362..9744122)
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AA seq
723 aa
AA seq
DB search
MAAAATMAAAARELVLRAGASDMEEEEGPLGGASGLQEPLQLGELDITSDEFILDEVDVH
IQANLEDELVKEALRTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGRLGELVDGLVVPST
LVTAILEAPVTEARFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYF
RSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGAVISPTELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGPAAHDLFHAVMG
RTLAMTLKHLESYLADCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPRF
ELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTXPNERTLQLLGQLQ
VEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAAEDSKEVESFQQLLNARTQEF
IEELLSPPFGGLVAFVKEAEGLIERGQADRLRGEEARVTQLIRGFGSSWKASVESLSQDV
MRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLAQPQLRALPARAELINIHHLMVELKKHK
PNF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgcggcgaccatggcggcggctgctcgggagctggtgttgcgggccggggcc
tcagatatggaggaggaggagggcccgctggggggtgcctctggactccaagagcccctg
caacttggggagttggatatcacctccgatgaattcatcctggatgaggtggatgttcac
atccaggcaaatctggaggatgaactggtgaaggaggctctcagaacgggtgtggatctg
cgacactattcgaagcaagtagagctggagctgcagcagattgagcagaaatcgatccgg
gactacatccaagagagtgagaacatagcgtctctgcacaatcagatcacagcctgtgat
gctgtcctggagcgcatggagcagatgttgggagcttttcagagtgacctcagctccatc
agctctgagatccggaccctgcaggagcagtcaggggccatgaacatccgacttcgtaac
cgacaggcagttcgggggagacttggggaacttgtagatgggctagtggtgccctccact
ctggtcacagcaattctggaagctccagtgacagaggccaggttcctggagcagctgcag
gagctggacgccaaggcagccgcagtcagggagcaggaggccagaggcacagctgcctgt
gcagacgtcagaggcgtgctggaccggctccgggtcaaggcagtgacaaagatccgcgag
ttcatcctccagaagatttattcgttcagaaagcccatgaccaactatcagatcccccag
acagccctgctgaagtacaggtttttctatcagtttctgttgggcaacgagcgagcaaca
gccaaggagatcagggatgaatacgtggagacgctgagcaagatctacctgtcttatttc
cgctcctacctggggcggctcatgaaagtgcagtacgaggaagttgccgagaaagacgat
ctaatgggtgtggaagacacagcaaagaaaggattcttctcgaagccgtccctccgaagc
aggaacaccatcttcaccctggggacccggggtgctgtcatctcccccactgaactcgag
gcccccatcctggtgccccacactgcccagcgtggagagcagaggtatccgttcgaggct
ctcttccgcagtcagcactacgccctcctcgacaattcctgccgtgaatatcttttcatc
tgtgaattctttgtcgtatctggcccagctgctcatgacctgttccatgctgtcatgggc
cgcacactcgccatgactctgaaacacctggagtcctacctggccgactgctacgacgcc
attgctgttttcctctgtatccacatcgttctccgattccgcaacatcgcagccaagagg
gatgtccctgccctggacaggtactgggagcaggtgcttgccttgctgtggcctcgcttt
gagctgatcctggagatgaatgtccagagtgtccgcagcaccgacccccagcgccttggg
ggcctggacactcggccccactatatcacacgccgctatgctgagttctcctctgcactt
gtgagcatcaaccagaccnatcccaatgagcgcaccctgcagctgctgggacagttacag
gtggaggtggagaattttgtcctccgagtggctgcagagttctcctccaggaaggagcag
cttgtgtttctgatcaacaactacgacatgatgctgggtgtgctgatggagcgggcagct
gaggacagcaaggaggtggagagcttccagcagctgctcaatgctcgcacacaggaattc
attgaagagctgctgtctccccccttcgggggtctggtggcctttgtgaaggaggctgaa
ggtttgattgagcgaggacaggccgaccgacttcgaggggaagaagcccgagtcactcag
ctgatccggggctttgggagttcctggaaggcctccgtggagtctctgagtcaggatgtc
atgcggagtttcactaacttccgaaatggaaccagcatcatccagggggcgctgacccag
ctgatccagctctaccaccgcttccaccgggtgctggcacagccgcagctccgggcgctg
ccagccagggcggagctcatcaacattcatcacctcatggtggagctcaagaaacacaag
cccaacttctga
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