Peromyscus leucopus (white-footed mouse): 114706173
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Entry
114706173 CDS
T07241
Symbol
Hcfc1
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1
KO
K14966
host cell factor 1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03083
Polycomb repressive complex
pleu04980
Cobalamin transport and metabolism
pleu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114706173 (Hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
114706173 (Hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114706173 (Hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pleu01009
]
114706173 (Hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114706173 (Hcfc1)
03029 Mitochondrial biogenesis [BR:
pleu03029
]
114706173 (Hcfc1)
Protein phosphatases and associated proteins [BR:
pleu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114706173 (Hcfc1)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
114706173 (Hcfc1)
HMT complexes
COMPASS/SET1 complex
114706173 (Hcfc1)
MLL-HCF complex
114706173 (Hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
114706173 (Hcfc1)
Mitochondrial biogenesis [BR:
pleu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
114706173 (Hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
114706173
NCBI-ProteinID:
XP_028744291
LinkDB
All DBs
Position
X:complement(136229774..136254473)
Genome browser
AA seq
2046 aa
AA seq
DB search
MASAVSPANLPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLVPQAATAPPSTTTIQVLPTVPGSSISVPTAART
QGVPAVLKVTGPQATTGTPLVTMRPASQSGKAPVTVTSLPASVRMVVPTQSAQGAVIGSN
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGAH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEAAASLVSSAVGQQNGNVVRVCSNPPC
ETHETGTTNTATTATSNMAGQHGCSNPPCETHETGTTSTATTAMSSIGTGQQRDTRHASS
TPTVVRITVAPGALERAQSTMKPQCQTQQTNMTSTTMTVQATGAPCPASPLLRPSVALEA
GSHSPALVQLALPNVRVGPSGPSNKDMPTGHQLETYHTYTTNTPTTALSIMGAGELGATR
VVPTSTYESLQASSPSSTMTMTALEALLCPSATVTQVCSNPPCETHETGTTNTATTSNAG
SAQRVCSNPPCETHETGTTHTATTATSNGSAGQPEGGQQPAGGRPCETHQTTSTGTTMSV
SVDALLPDATPAHETLESGLEVVAVPTVTSQAGTTLLASFSTQRVCSNPPCETHETGTTH
TATTVTSNMSSNQDPPPAASDQGEVVDTQGDSTNITSASGITTTVSSTLPRAVTTVTQST
PVPGPSVPPPEELQVSPGPRQQLPPRQLLQSASTPLMGESAEVLSASQTPELQAAVDLSS
TGDPSSVQEPASSAVVATVVVQPPPPSQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEE
LAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMGTGEPMDTSEAAAAVTQAELGHLS
AEGQEGQATTIPIVLTQQELAALVQQQQQLQEAQAQAQQQHHLPTEALAPADSLNDPSIE
SNCLNELASAVPSTVALLPSTATESLAPSNTFVAPQPVVVASPAKMQAAATLTEVANGIE
SLGVKPDLPPPPSKAPVKKENQWFDVGVIKGTSVMVTHYFLPSDDAIQSDDDSGMVPDYN
QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLT
WEPPSVTSGKIIEYSVYLAIQSSQAGGEPKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNA
HIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDNSGTKPASKRPMSSPEMKSAPKK
SKADGQ
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggctgtgtctcctgccaacttgccagcggtgcttctgcagccccgctggaag
cgagtggtgggttggtcgggtcccgtgccccgaccccgccacggccaccgtgccgtggct
atcaaggagctcatagtggtgtttggcggcggcaatgaagggatagtggacgaactacac
gtgtacaacactgcgaccaaccagtggtttatcccagctgtgagaggggatatccctcca
gggtgtgcagcctatggctttgtgtgtgatggtactcgtctactggtgtttggtgggatg
gtggagtatggaaaatacagcaacgacctctatgaacttcaggccagtcgctgggaatgg
aagagactgaaagcaaagacgcccaaaaatggacctcctccgtgtcctcgacttggacac
agcttctcccttgtgggcaacaaatgctacctatttgggggtctggccaatgacagtgag
gaccccaagaacaacattccgaggtacctgaatgacttatatatcctcgaactacggcca
ggctctggagtggtagcttgggacatccccatcacttacggagtcctgcctccacctcgg
gagtcacatactgccgtggtctacactgaaaaagataacaagaaatccaagctggtgatc
tatggagggatgagtggctgcaggctaggggacctttggactctagacatcgagacactg
acatggaataagcccagccttagcggggtggcaccccttcctcgaagcctccattctgca
accactataggaaacaaaatgtatgtatttggtggctgggtgcctcttgtcatggatgat
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacgctggcttgtctcaac
ctggataccatggcctgggaaaccatcctaatggatacactggaagacaacattcctcga
gctcgagccggtcactgtgctgttgccatcaatactcgcttgtatatttggagtggccgt
gatggctaccgcaaggcctggaacaaccaggtctgctgcaaggacctgtggtatctggag
acagaaaagccaccacccccagcccgagtacaactagtacgagccaacaccaattcactg
gaggttagctggggtgcagtggcaacagccgacagttaccttctgcagctccagaaatat
gacattcctgccacggctgctacggctacctcccccactcccaatccagtcccatctgtg
cctgccaaccctcccaagagccctgcgcctgcagcagctgcacctgctgtgcagccactg
acccaagtaggcatcacacttgtgccccaggctgccactgcacccccaagcactaccaca
atccaggtcttgccgacagtgccaggcagctccatttctgtgcccactgcagccaggact
caaggtgttcctgctgttctcaaagtgactggtcctcaggctacaacaggaaccccactg
gtcaccatgagacctgccagccagtctggaaaagcccctgtcactgtgacctctctgcct
gctagtgtgcgaatggttgtacccacacagagtgcccagggggcggtgattggcagcaac
ccgcagatgagtggaatggctgcattggctgctgctgccgctgccacacagaaaatccct
ccttcctcagcacccacagtgctgagtgtcccagcaggcaccaccattgtcaagacagtg
gctgtgacacctggcacaaccactcttccagccactgtgaaggtggcctcctcccctgtc
atggtgagcaacccagccactcgcatgctaaagactgcagctgcccaagtggggacatct
gtgtcctctgctgccaacacgtctacccgtcctatcatcacggtacacaaatcgggcact
gtgacagtggcccagcaagcccaggtggtgaccacagtggtaggcggagtcaccaaaacc
atcaccctagtgaagagccccatctctgtcccaggaggcagtgctctgatttccaatctg
ggaaaagtgatgtcagtggtccagaccaaaccagttcagacttcagcagtcacaggccaa
gcctctacaggccctgtgactcagatcatccagaccaaagggcctctgccagcggggact
atcctgaagctggtaacatcagcagatggcaagcccacaaccatcatcaccaccacacag
gctagtggagcagggaccaagcctacgatcctgggcatcagtagtgtctctcccagcacc
accaaacctggcacgactaccattatcaagaccattcccatgtcagccattatcacccag
gcaggcgccacaggtgttaccagcagtcccggcattaagtcccccatcacaattatcacc
accaaggtaatgacttctggaacaggagcacctgccaaaatcatcactgctgtccccaag
attgctactggccatggacagcaaggagtgacccaggtggtgctaaagggggcccctgga
cagccaggcaccatcctccgcacagtgcccatgggcggcgttcgcctggtcacccctgtc
accgtctccgctgtcaagccagctgtcaccacattggttgtgaagggcaccacaggtgtc
acaaccctaggcacagtgacaggcactgtctctactagccttgcaggagctggggcccat
agcaccagtgcctccctggccacacctatcaccaccttgggcaccattgccactctctca
agccaggtgatcaaccctactgccatcacagtatcagctgcacagaccacactgacagct
gctggtgggcttactacacccacaatcacaatgcagcctgtctcccagcctacccaggtt
actctgatcacagcacccagtggggttgaggcccagcctgtacatgaccttcctgtgtcc
attttggcctcacctactacagagcagcccacagcaacagtcaccatcgctgactcgggc
cagggtgatgtacagcctggcactgtgacactggtgtgctccaacccaccctgtgaaacc
catgaaacaggcaccaccaacacagccaccaccactgttgtggctaaccttgggggacat
cctcagcctacccaggtgcagtttgtttgtgacagacaggaggcagctgcttctcttgtg
tcctcagctgtgggacaacagaatggtaatgtggtccgtgtctgttcaaaccccccctgt
gagacccatgagacaggcaccaccaacactgccacaacagccacatccaacatggctggt
cagcatggctgctcaaaccccccttgtgagactcatgagacaggtaccaccagcactgct
actacagcaatgtccagcattggcactgggcagcagcgagacactcgtcatgcctctagc
acccccactgtagtgcggatcactgtggctcctggggcattggagagagcccagagtact
atgaagcctcagtgccaaacacagcagaccaacatgaccagcaccaccatgactgtgcag
gccaccggagctccatgcccagctagcccactgctcaggccaagtgtagcactggaggct
gggagccacagccctgcccttgtgcagctagcccttccaaatgttagagttgggccaagt
ggccctagcaacaaggacatgcccacagggcaccagctggagacatatcatacttataca
accaataccccaaccacagccctctctatcatgggtgctggggagcttggtgcaactcgg
gtggtccccacatctacatatgagagcctccaggcaagctctcccagcagcaccatgact
atgacagccctagaggcgctattgtgcccttcagctaccgtgacccaagtctgctccaac
ccaccgtgtgagacccatgagacgggcaccaccaacactgccactacctccaatgcgggc
agtgcccagagggtatgctccaacccgccttgtgagactcatgagactggaaccacacac
actgccactactgccacatcaaatggaagtgcaggccagcctgagggtggacaacagcct
gccggtggccgtccttgtgagacacaccagacaacttccactggcaccactatgtcagtc
agtgtggatgccctgcttcctgatgctactcctgctcatgaaaccctggagtctggctta
gaggttgtagcagtgcccaccgtcacctcccaggctggtaccacattgctggcttctttc
tcaacacagagggtatgctccaaccctccttgcgagacccacgagacaggcaccacacac
acagctaccactgtcacctctaacatgagctcaaaccaagaccctccaccagctgccagt
gaccagggagaggtggtggacacccaaggtgacagcacaaacatcaccagcgccagtggt
atcacaacaacagtgtcctccacactgccacgagcagtgaccactgtgacacagtctaca
ccagtcccaggtccctctgtgccgcccccagaggaactccaggtctcaccagggcctcgc
cagcagctgccaccacggcaactccttcagtctgcctctacccctctgatgggggagtcc
gctgaggtcctgtcagcctcccagacccctgaactccaggccgccgtggatctgagcagc
actggggacccatcttcagtccaggagcctgccagctctgctgttgtggccactgtggtg
gtccagccacctccaccttcacagtctgaagtagaccagttatcacttccccaagaactg
atggctgaggcccaggcgggcaccaccacccttatggtaacagggctcaccccagaggag
ctagctgtgactgctgctgctgaagcagctgcccaagctgcagccactgaagaagctcaa
gccttggccatccaggctgtgctccaggctgcacagcaagctgtcatgggcactggggaa
cccatggatacatctgaagcagcagcagcagtgacacaagcagagctgggtcacctttca
gctgagggccaagaaggtcaggccaccaccatacccattgtgctgacacagcaggagctt
gcagccctggtgcaacagcagcagcagctccaggaggctcaagctcaagcccagcagcag
caccacctccctactgaggctctggccccagctgacagtctcaatgatccatccatcgag
agcaactgcctcaacgagctagctagtgccgtccctagcactgtggccttgctaccctca
acagccactgagagcctggctccatccaacacatttgtggctccccagcctgttgttgta
gccagcccagcaaagatgcaggctgcagctaccctaactgaagtggccaatggcatcgag
tccctgggtgtgaaaccagacttgccacccccacccagcaaagcccctgtgaaaaaggag
aaccagtggtttgatgtgggggtcattaagggtaccagtgtaatggtgacacactatttt
ctgccatcagatgatgctattcagtcagatgatgactcaggcatggtcccagactataac
cagctgaagaagcaggagctacagccaggcactgcctataaatttcgtgttgctggaatc
aatgcttgtggccgggggccctttagtgagatctcagcctttaagacctgtttgcctggt
ttcccaggggctccttgtgccattaaaatcagcaagagcccagatggtgctcacctcacc
tgggagccaccatctgtgacctccggcaagatcatcgagtattctgtgtacctggccatc
cagagctcacaggctggtggtgagcccaagagctccaccccagcccagctagccttcatg
cgagtgtactgtgggcctagcccttcctgcctcgtgcagtcctccagcctctccaatgcc
cacattgactacaccaccaagcctgccatcatcttccgcattgctgcccgcaatgaaaag
ggctatggccctgctacacaagtgaggtggttgcaagaaaccagtaaagacaactcgggc
accaagccagccagcaagaggcccatgtcgtctccagaaatgaaatctgctccaaagaag
tctaaggctgatggtcagtga
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