Peromyscus leucopus (white-footed mouse): 114707010
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Entry
114707010 CDS
T07241
Symbol
Casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013
Nucleocytoplasmic transport
pleu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114707010 (Casc3)
03015 mRNA surveillance pathway
114707010 (Casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114707010 (Casc3)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114707010 (Casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
114707010
NCBI-ProteinID:
XP_028745430
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All DBs
Position
8b:complement(93629225..93656444)
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AA seq
700 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGSPGRGGGSCSGSAGGGGSGSLPSQRGGRGGGLHL
RRVESGGVKSAEESECESEDGMEGDAVLSDYESAEDSEGEEEYSEEENSKVELKSEANDA
ADSSAKEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIP
RKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYD
IRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGDRSNKSHRHQGPGGTLPPRTFINRNAAG
TGRMSASRNYSRSGGFKEGRTGYRPVEVGGQHGGRSGETHRHEANYRSRRLEQTPMRDPS
PEPDAPLLGSPEKEEAPSETPATVPDTVPPAPDRPIEKKSYSRARRTRTKVGDAVKAAEE
VPPPSEGLTSAATVPETTPPPAAKTGNWEAPVDSTTGGLEQDVAQLNIAEQNWSPGQPSF
LQPRELRGMPNHIHMGAGPPPQFNRIEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISIM
EGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQSPAPLPNPGLYPPP
VSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYGG
VTYYNPAQQQVQPKPSPPRRTPQPVSIKPPPPEVVSRGSS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcgtcggcagcgcgcttcccaggacacggaggacgaagaatccggtgct
tcgggttccgacagcggctctccggggcggggcggcggcagctgcagcgggagcgccggc
ggcggcggtagtggctcgctgccttctcagcgcggcggccgcggcgggggcctccatctg
cggcgggtggagagcgggggcgtcaagagcgcggaggagtcggagtgtgagagtgaagat
ggcatggaaggcgatgctgttctttccgattatgaaagtgcagaagattcggaaggtgaa
gaagaatacagtgaagaggaaaactccaaagtggagttgaaatcagaggctaatgatgct
gctgattcctcagcaaaagagaagggagaagaaaagcctgatactaaaggcactgtgacg
ggagagaggcaaagcggggatggacaggagagcacagagcctgtagagaacaaagtgggt
aaaaaaggccctaagcatttggatgatgatgaagatcggaaaaatccagcatatataccc
aggaaagggctcttctttgagcatgatcttcgaggacaaactcaggaagaggaagttcga
cccaaaggacgtcagcgaaagctatggaaggatgagggtcgctgggagcatgataagttc
cgtgaagatgaacaggccccaaagtcccgacaggagctcattgctctttatggctatgat
attcgatccgctcacaatcctgatgacatcaaaccccgaagaatccggaaacctcgattt
ggaagtcctccacaaagagatccaaactggattggtgatcgatcaaacaagtcccatcgc
catcagggtcctgggggtaccctaccaccaaggacatttattaacaggaatgcagcaggt
actggccgcatgtctgcatccagaaattattctcgatctgggggcttcaaggaaggtcgt
actggttataggcctgtggaggttggtgggcagcatggtggccggtctggtgagactcat
aggcatgaagctaattaccggtcacggcgtctggagcagactcctatgagggatccatct
ccagaaccagatgctccattgcttggcagtcctgagaaagaagaggcgccctcagagaca
ccagctactgttcctgacactgtaccaccagctcctgacaggcccattgagaagaaatcc
tattcccgggcaagaaggacccggaccaaagttggggatgcagtcaaagctgctgaggag
gttcctcctccatctgaagggctgacttcagcagccacagtcccagaaacaactccacct
ccagctgctaagactgggaactgggaggctccagtagattctaccacaggtggactggag
caagatgtggcacagctcaatatagcggaacagaactggagtccaggacagccttccttc
ctccaaccacgggagcttcgaggtatgcccaaccacatccatatgggagcaggacctcca
cctcagtttaaccggattgaagaaatgggtgtccagggtggtcgagctaaacgttattca
tcccagcggcagagacctgtgccagagcctcctgctcctcctgtgcatatcagtatcatg
gagggacattactacgatccattgcagttccagggaccaatctatacccatggtgacagc
cctgctccactgcctccccagggcatgattgtacaaccagaaatgcaccttcctcaccca
ggtttacatccccatcagtcaccagcacctctgcccaatccgggtctctacccaccacca
gtgtccatgtctccaggacaaccaccaccccagcagttgcttgctcctacttacttttct
gctccaggtgtcatgaattttggtaaccccagttacccttatgctccaggagcattacct
cctcctccacctcctcatctgtatcctaacacacaggctccatcgcaggtgtatggagga
gtgacctactataaccctgcccagcagcaggtgcagccaaaaccctccccaccccggagg
actccccagccagtctccatcaaaccccctccacctgaggttgtaagcaggggttccagt
taa
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integrated database retrieval system
