Peromyscus leucopus (white-footed mouse): 114707424
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Entry
114707424 CDS
T07241
Symbol
Trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pleu03016
]
114707424 (Trmt13)
Enzymes [BR:
pleu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
114707424 (Trmt13)
Transfer RNA biogenesis [BR:
pleu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
114707424 (Trmt13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
114707424
NCBI-ProteinID:
XP_028745990
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Position
6:complement(90320944..90339641)
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AA seq
480 aa
AA seq
DB search
MEAPAPTSHATGFPAEGRCSYFVEKKKRFCRMVAAAGKRFCGEHAGAAEEENARKRILCP
LDPKHTVYEDQLAKHLKKCNSREKPKPDFFTQDVNAGLKEEMDISEQLVPFSSLTEEQLE
NLIKKLRKASEGLNSTLEDHIMSHPALHDALNDPKNGDCAVKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAENIHFILVEKMTTRFKVDGKHRKESSVFERLQI
DIQHLCLNRVPVLREGRLPVVGIGKHLCGVATDLALRCLVETYAASFEERNEEPLAKRIR
NDRRDQESSTLSKEESEANAPETWAPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGPEE
FYYFQRMSSWATCGMRTSLGASDITTKRKDDQNYDNEEHDDGGDRLPDGSTDSVPGALTA
EEKKDIGHLCKLLIDQGRLQYLQQKGFRPALQYYADPLVSLENVLLTAVPAHLSSQEAAQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcctgcgccgacctcgcacgccaccggctttccagccgagggcagatgcagc
tactttgtggaaaagaagaagcgcttctgcaggatggtggcggccgcggggaaaaggttc
tgtggtgaacacgctggagccgcggaggaagaaaatgctcggaaaagaatcttgtgtcct
ttagatccaaaacacacagtatatgaagaccaactagcaaaacatttaaaaaaatgtaac
tcaagagagaagccaaagcctgatttctttactcaagatgtaaatgcaggattaaaggaa
gaaatggacatttctgagcaattagttccattttcttctctgactgaagagcagttggaa
aacttaattaagaaattaagaaaagcaagtgaaggcttgaattctacacttgaagatcac
attatgtcccatccagcattacatgatgccctgaatgaccctaaaaatggtgactgtgca
gtcaagcacctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgttgagtttggagcaggaaaggggaagttatctcactgggtt
gatattgccttaaaagatgctgaaaacattcacttcatcctggtagagaaaatgactaca
agattcaaggtagatggtaaacatagaaaggagagctcagtgtttgaaagacttcagatc
gatattcaacacttgtgtctgaacagggttcctgtgctcagagaaggaagactgcctgtg
gtaggaattgggaagcatctgtgcggggtcgcaacagatcttgcattacgatgtttggtt
gaaacctatgctgccagttttgaggaaaggaatgaagagcctttagccaaacgcatacgg
aacgatagaagagaccaggaaagtagcactttgtccaaggaagaaagtgaagcaaatgcc
ccggagacgtgggcccccgtggctggcattgtcattgcgctctgctgtcaccacaggtgt
gactggagacactatgtgggcaaagagtacttcagggctctgggccttgggccggaggag
ttctactatttccagagaatgagtagttgggcaacgtgtggaatgaggacatctttggga
gcctcagatatcactacaaagagaaaagatgatcagaattacgacaacgaagagcatgat
gacggaggagacagactcccagatggcagcactgatagtgtgcctggagctcttactgct
gaagaaaagaaggatataggacatctttgcaaactgctgattgaccaaggccgactccag
tatttacagcagaaaggcttccgtcctgccttgcagtactatgcagacccgttggtgtct
ctggagaacgtattactaactgctgtaccagctcatctgtcatcgcaggaagcagcgcag
taa
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