Peromyscus leucopus (white-footed mouse): 114708058
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Entry
114708058 CDS
T07241
Symbol
Ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013
Nucleocytoplasmic transport
pleu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114708058 (Ddx19a)
03015 mRNA surveillance pathway
114708058 (Ddx19a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114708058 (Ddx19a)
Enzymes [BR:
pleu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114708058 (Ddx19a)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114708058 (Ddx19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114708058
NCBI-ProteinID:
XP_028746878
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All DBs
Position
5:complement(112971675..112999243)
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AA seq
478 aa
AA seq
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MATDSWALAVDEQEAAVKSMSSLQIKEEKVKADTNGVIKTSTTAEKTEEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRHPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAVRGNKLDRGQKVSEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVVCNNREEKFQALCNLYGAITIAQAMIFCHTRKTAGWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcctgggcgctggcggtggacgagcaggaagccgctgtcaagtcgatg
agcagtttgcagatcaaagaagaaaaggtcaaagcagacaccaatggtgttatcaaaacc
agcaccaccgcagagaagactgaggaggaagagaaagaggacagagctgctcagtcttta
ctcaacaagctgatcagaagcaatcttgtggataacaccaaccaagtagaagtcctgcag
agggacccaacctcccctctctactcggtgaagtctttcgaagagcttcgcttgaaacca
cagcttctccaaggagtctatgccatgggcttcaatcgaccatccaagatccaggagaat
gcattgcccatgatgcttgctgaacccccgcagaacctaatcgcccagtctcagtctggt
actgggaaaactgccgcctttgtcttagctatgctcagcagagtggaaccatcagacaga
catcctcagtgtttgtgcctgtccccaacatatgagctggcacttcaaacaggaaaagtg
attgagcagatgggcaagtttcatccagaattgaagctagcttatgctgttcgaggcaat
aaattggacagaggtcagaaggtcagtgagcagattgtcattggcacccccgggaccgtc
ctggactggtgctccaagctgaagttcattgaccccaagaagatcaaggtgtttgttctg
gacgaggctgacgtgatgatagcaactcagggccaccaagaccagagcatccgcatccag
aggatgctgcccagaaactgccagatgctgctcttctctgccacctttgaagactcagtg
tggaagtttgcccagaaggtggtcccagaccccaacatcatcaaacttaagcgtgaagag
gagacgttggacaccatcaaacagtattacgtcgtttgcaataacagagaggagaagttc
caggctctgtgcaacctgtatggggccatcaccatcgcccaagccatgatcttctgccat
acccgcaaaacagctggctggctggcagcagagctctccaaagagggccaccaggtggct
ctgctgagtggggagatgatggtggaacagagggcggctgtgattgagcgcttccgagaa
ggcaaagagaaggtcctggtgaccaccaacgtgtgtgcccgtggtattgatgttgaacaa
gtgtctgtggtcatcaattttgaccttcctgtggacaaggacgggaacccagacaacgag
acctacctgcaccgcatcgggcgcacgggccgctttggcaagaggggtctggccgtgaac
atggttgacagcaagcacagcatgaacatcctcaacagaatccaggagcattttaataag
aagatagaaagattggacacagatgatttggatgagatcgagaaaatagccaactga
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