Peromyscus leucopus (white-footed mouse): 114708112
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Entry
114708112 CDS
T07241
Symbol
Pdzd7
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing protein 7
KO
K21882
PDZ domain-containing protein 7
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pleu03037
]
114708112 (Pdzd7)
04990 Domain-containing proteins not elsewhere classified [BR:
pleu04990
]
114708112 (Pdzd7)
Cilium and associated proteins [BR:
pleu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
114708112 (Pdzd7)
Domain-containing proteins not elsewhere classified [BR:
pleu04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
114708112 (Pdzd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
114708112
NCBI-ProteinID:
XP_037063197
LinkDB
All DBs
Position
1:complement(52057012..52075542)
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AA seq
1019 aa
AA seq
DB search
MARGFTVGFDPLGLGELSSGSLSSLSSRGHLGSDPGSTATRYLLRKQQQRLLNGPPRGIR
ASSPMGRVILINSPIEANSDESDIIHAVRVEKSPSGRLGFSVRGGSEHGLGIFVSKVEKG
SSAERAGLCVGDKITEVNGLSLESTTMGSAVRLLTSSSCLHMMVRRMGRVPGIKFSKEKT
TWVDVVNRRLVVEKCSSTPSDSSSEDGVRRIVHLYTTSDDFCLGFNIRGGKEFGLGIYVS
KVDHGGLAEENGIKVGDQVLAANGVRFDDISHSQAVEVLKGQTHIMLTIKETGRYPAYKE
MVSEYCWLDRLSSGVLQQLSPASESGSSVSSCASSALCSSGSLPSDRMEVCLGPEEPGGH
GPGWGRADTAMQTEPDMGSRVETWCSVRPTVILRDTAIRSDGPSSVRRLDSALSESPKTA
LLLALSRPRPPITRSQSHLTLWEEKKQRKKEKSGSPGEKGALQRSKTLMNLFFKGGRQGR
PAGDAHREAWTLDSRSPTKVRPRLDLEKAGSVGPVQKFVTWRLRRERERGRALLSARSGS
PSGQLPNVDEQVQAWESRRPLIQDLARRLLTDDEVLAITRHCSRYVHEGGVEDLVRPLLA
ILDRPEKLLLLRDIRSVVAPTDLGRFDSMVMPVELEAFEALKSRAVRPSALRPTRQDTPP
KRHLITPVPDSRGGFYLMPVNGCSEDDDGEIRERLGGLKVALRASAPGHHHKGIPPLQDV
PVDAFSPRRSACTPPPQPPPVAPRPPRPNWLLTEPPSKESTQQNQSQTPGRSRSRSRSRG
RGKSPGRMRSPSPAPITNATTANGRYHRPRKARPLLPRPLDGQEAKVGARQGPLENGIGG
TTKETTWKASAGELRTVTLSKMKQSLGISISGGIESKVQPMVKIEKIFPGGAAFLCGALQ
AGFELVAVDGESLEQVTHQRAVDTIRRAYRNKAREPMELVVRVPGPGLLPSSASLAIKDQ
SLPAGSSSAHGPLDNTPTLTQIPPPEDRQLQQAFTPALQAPPSAPKLSPLLTDPHDPSH
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtggtttcacagtgggctttgacccattgggtctaggagagctcagctctggt
tctctgagctccctctcttcccgaggccacctgggcagcgacccaggctccacagcaaca
cgatacttgctgaggaagcagcagcagcgcctgctgaatggcccgccccgcggaatccga
gcctcatcccccatgggccgagtcatcctcatcaactcccccattgaagccaacagtgat
gaaagtgacatcatccatgcagtccgggtcgagaagagcccctctgggaggctaggtttc
agcgtgagaggcggctctgagcatggcctgggcatcttcgtcagcaaggtggagaagggg
agcagtgcagagcgggctggcctgtgtgtgggggacaagatcaccgaggtgaacgggctg
agtctagaaagtaccacgatgggcagtgctgtgaggctgctgaccagcagcagctgcctg
cacatgatggtgcggcgcatgggccgtgtgcctggcatcaagttctccaaggagaagacc
acatgggtggatgtagtgaaccgacggctcgtggtggagaagtgcagctccacgccatcg
gacagcagctcagaagacggtgtgcggcgcatcgtccacctctacacaacctcggacgac
ttctgcctaggcttcaacatccgcgggggcaaggagtttggcctgggcatctatgtgtct
aaagtggaccatggtgggctggctgaggagaatggcatcaaagtgggggaccaggtcctg
gcggccaacggtgtcaggttcgatgacatcagccacagccaggccgtggaggtgctgaag
ggccaaacgcacataatgttgaccataaaggagacgggccggtaccctgcctacaaagag
atggtttctgagtactgctggctggacagattgagcagtggggtgctccagcagctgtct
ccggcctcggagagtggttccagcgtctcctcctgtgcctccagtgccctgtgcagctca
ggctcactaccctctgaccgcatggaagtctgcctagggcctgaggagcccggtggccat
ggcccaggctgggggcgggcagacacggccatgcagacggagcctgatatgggcagccgt
gtggaaacttggtgcagtgtacggccaaccgtcatcctcagggacacggccatccgctct
gacggtccctcttctgtccgacgccttgattctgcactttcagagtcacccaagacagct
ctgctgctggccctcagccgacccaggcctcccatcacccgatcccagagccacctgaca
ctgtgggaggagaagaaacagcggaagaaggagaagtcagggtcccctggggagaagggg
gccttgcagcgctccaagacgctgatgaacctcttcttcaagggagggcggcaggggcgg
ccagcaggggacgcgcatagagaggcctggacactggacagcagaagccccaccaaagtc
cgccctcgcctggacctggagaaagcagggagcgtggggcctgtgcagaagtttgtcacc
tggagactgagacgtgaacgggagaggggccgggccctgctctctgccaggtccggaagc
ccctctggccagctgcccaatgtggatgagcaggtgcaggcctgggaaagccggcgaccc
ctcattcaggacctggcccggcggctgctgacagacgacgaggtgctagccatcactcga
cactgctcgaggtatgtccatgagggcggtgtggaggacctggtgcgccccctgctggcc
atcctggacaggccggagaagctgctgctgctgagggacatcaggagtgtggtggccccc
acggacctcggccgcttcgacagcatggtgatgcccgtggagctggaggcttttgaggct
ctcaagagccgggcagttcggccttctgctttgagaccaaccaggcaagacacgccaccc
aagcgtcacctcatcacccctgtgcctgatagccgtggaggattctacttgatgccagtg
aatggctgttcagaggatgacgacggagagatcagggagaggctagggggtcttaaggtc
gccctccgtgcctctgcccctggccaccaccataaaggaatcccccctctacaagatgta
ccggtggatgccttctcccctcgccgaagcgcatgtacaccccctccccaaccacctcct
gtggctccccggcctcccaggcctaactggctactgacagaacccccaagtaaagagagc
actcagcagaaccagagtcagaccccaggccgcagccgaagccgcagccgcagcagaggg
cgaggcaagtcccctgggcgcatgcgctccccctccccagcacccatcaccaatgccacc
acagccaatgggcgctaccacaggcctcggaaggcaaggcccttgcttccacgacctctg
gatgggcaggaggccaaggtgggagctaggcaagggcccttggagaacggcattggtggg
acaaccaaggagacgacctggaaagcctccgctggagagctgaggacagtcacgctatcc
aagatgaagcagtctttgggcatcagcatttctgggggcatcgagtccaaggtgcagccc
atggtgaagatagagaagatctttcccggaggtgccgctttcctctgcggggccctgcag
gctggcttcgagctggtggcagtggatggggaaagcctggagcaggtgactcaccagcga
gctgtggacaccatccgcagagcatacagaaacaaggctcgggagcctatggagcttgtg
gtcagggttcctggacctggcctgctgccctcatctgcctcattagccattaaggaccag
agccttcctgctggcagttcctctgcccatggaccccttgacaataccccaaccctcacc
cagatccctccccctgaggatagacaactacagcaggccttcaccccagcccttcaggct
cctccaagtgcccccaaactctcccctcttcttacggatccccatgacccttcccactga
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