Peromyscus leucopus (white-footed mouse): 114708303
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Entry
114708303 CDS
T07241
Symbol
Ccdc88a
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pleu03037
]
114708303 (Ccdc88a)
Cilium and associated proteins [BR:
pleu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114708303 (Ccdc88a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
114708303
NCBI-ProteinID:
XP_028747352
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Position
10:complement(5394510..5556790)
Genome browser
AA seq
2023 aa
AA seq
DB search
MENEIFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKSE
SQRVNKKVNNDASLRIHNLSILVKQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
MSQEDVEPLLKNMVSHLKRLIDERDEHSETIVELSEERDGLHFLPHASSSAQSPCGSPGM
KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQIEIELKRLQQENMNLLS
DARSARMYRDELDALREKAVRVDKLESELSRYKERLHDIEFYKARVEELKEDNQVLLETK
TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK
QSMDESLHLGWELEQISRTSELAEAPQKSLGHEVNELTSSKLLKLEMENQSLTKTVEELR
STMDSAEGSTSKILKIEKENQRLNKKVEILENEIIQEKRSLQNCQNLSKDLMKEKAQLEK
TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS
GKLSKVEFEKRQMKKELEHYKEKGERAEELENELHHLGKENELLQKKITNLKITCEKVEA
LEQENSELERENRKFKKTLDSFKNLTFQLESLEKENSQLDEENLELRRSVESLKCAGVKM
AQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENHRLQKALENSNKKIQ
QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR
LRQQAEIKDTTLEENNVKIGNLEKENKTLFKEINIYKESCVRLKELEKENKELVKRATID
IKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSRYKLLESK
LESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEETMVQSS
PPVSGEDSKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNSNLQ
AQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENE
SIIKEREDLKSLYDSLIKDHEKLELLHERQASDYESLISKHGTLKSAHKNLEVEHKDLED
RYNQLLKQKGQLEDLEKMIKMEQEKMLLESKNHEMVAAEYKKLCGENDRLNHTYCQLLKE
TEILQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPHQDSQ
DSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMV
LAGGQWTGSTENLEVPDDIPTGKRRKELGAMAFSTTAINFSPVSSSAAFRSKQLVNNKDT
TSFEDVSPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNNQSRPQ
SHSSGEFSLLHDHETWSSSGSSPIQYLKRQTRSSPMLQHKMSETVESRAHHKIKAGSPGS
EVVTLQQFLEESNKLTSIQLKSSSQENLLDEVMKSLSVSSDFLGKDKPVSCALARSVSGK
TPGDFYDRRTTKPEFLRPGPRKTEDAYSISSAGKPTPSTQGKIKLVKETSVSRQSKDSNP
YATLPRASSVISTAEGTTRRTSIHDLLTKDSRLPVSVDSAPPAADSSIAAASSEYRLQQW
SSDVPNQAGGHQAPDDLAADTAESLYTQARKSKPGRPHFLNQTFATIKMSNDAFGISAND
SRRSFTVVHSSHPFLSLNTELVSNISGLPSKSLTRVTDQASSSWGKAAQKQFCDSQNPSN
SSPQSSVDSNNLTIPACLYPEDTEVALSVSEDSQTVWYEYGCV
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaaatctttactccccttctggagcagttcatgaccagccccttggtcact
tgggttaaaacgtttggacctctggctgcaggaaatgggaccaacctggatgagtatgtg
gccttggtggatggggtattcttgaaccaggtcatgctccaaattaatcctaaatcggag
agtcagagagtaaataaaaaagtcaacaatgatgcttcacttagaattcataacctctcc
attttggtgaaacagataaagttttattatcaggagactttgcagcagttgattatgatg
tcattgccaaatgtcttaatcattggcaaaaatcccttttctgaacaaggcacagaagaa
gttaaaaagttgcttttactcttactgggttgtgcagttcagtgtcagaaaaaggaagaa
tttattgaacgaattcaaggtttagattttgatacaaaagcagcagttgccgcacatatt
caagaggtaacgcataatcaggaaaatgtatttgatctgcaatggatggaggtgacagat
atgtctcaggaagatgtagaaccactcttgaagaatatggtatcacatctaaaaagactg
atagatgagagagacgaacattcagagactatcgtagagctatctgaagagcgagatggt
cttcattttctaccacatgcctcttcgtctgcacagtcaccctgtggttctcctggcatg
aagcgaacagaaagtcgacagcacctctcagtggaactggctgatgctaaggccaagatc
cgaagactgaggcaggaattggaagaaaagactgagcagttattggactgtaaacaagaa
cttgaacaaatagaaatagaattgaagaggctacaacaagagaacatgaatttgctgtca
gatgctcgatctgctcgaatgtaccgagatgaattggatgcacttcgagagaaggcagtc
cgagtggataagcttgaaagtgaactcagcagatacaaagagagacttcatgacattgaa
ttttataaggcaagagttgaggaattaaaagaagataatcaagttttattagaaacaaaa
accatgttggaagaccaactagaaggaactcgagctcgttctgacaaattacatgaacta
gaaaaagagaatttacaactaaaggctaaattgcatgatatggaaatggaacgagatatg
gatagaaagaagatagaagaattaatggaagaaaatatgactttggaaatggcacagaaa
caaagtatggatgagtcattacatcttggctgggaactagaacaaatatccagaactagt
gaacttgctgaagcaccacagaaatccttgggccatgaagtaaatgagttgacatccagt
aagttattaaagttggagatggaaaaccaaagtttgacaaaaactgtagaagagcttcgg
agtactatggactctgcagaaggcagcacttccaaaatcctaaaaattgaaaaagaaaac
cagagactgaataaaaaggttgaaattcttgaaaatgaaattattcaagaaaagcgaagt
cttcagaattgtcaaaatttaagcaaagatctaatgaaagaaaaagctcagcttgaaaaa
acaattgaaacactcagagaaaattcagagaggcagattaaaatattggagcaggaaaat
gaacatctgaatcaaactgtatcttccttacgacaacgctcccagattagtgctgaggca
agggtgaaagacattgaaaaagaaaataaaattctccatgaatctatcaaagaaacaagt
ggaaaactaagcaaggttgaatttgaaaaaagacaaatgaaaaaagaattggagcattat
aaagagaaaggagagcgagcagaagaactggaaaatgagttgcatcatcttggaaaagaa
aatgaattgttacagaagaagataactaatttaaagattacttgtgaaaaagtcgaggca
ttagaacaagaaaattccgagctagaaagagaaaatagaaagtttaaaaaaactttggat
agctttaaaaaccttacttttcagttagaatccctagaaaaggagaattcccaacttgat
gaggaaaacttagagctgcgaaggagtgtggagtctctgaagtgtgcgggcgtgaaaatg
gcgcagctgcagctggagaacaaggagctggagagtgagaaggagcagctcaagaagggc
ctggagctcatgaaagcctccttcaagaagacagagcgcttggaagtgagctaccagggg
ctcgacacagaaaaccacaggctgcagaaagctctagaaaatagcaataaaaaaatccaa
cagttagagagtgagctacaagacttagagatggaaaatcaaacattacaaaagaacctg
gaagaactgaaaatttctagcaaaagacttgaacaattagaaaaagaaaataaatcatta
gaacaggagacttctcaactagaaaaggacaagaaacaattggagaaggaaaataagaga
ctccgacaacaagcagagataaaagataccacactagaagaaaataatgtgaaaattgga
aatttggaaaaagaaaacaaaactttatttaaagaaattaatatatataaagagtcctgt
gttcgtttgaaagaactagaaaaagaaaacaaggagcttgtgaaaagagcaactattgat
attaaaactttggttacattacgtgaggacttagtaagtgaaaaattgaagacgcaacaa
atgaacaatgatctcgaaaaattaacacatgagcttgagaagataggtttaaataaagag
cgactcttacatgatgagcaaagtactgacgacagtaggtacaaacttttggaatcaaaa
ttagaatccactcttaagaagtcccttgaaataaaagaagaaaaaattgctgctttagaa
gctcggttggaagagtctacaaattacaatcaacagttgcgccaagaactaaaaacagtg
aaaaaaaattatgaagctctcaaacagagacaagatgaggaaacgatggtgcagagctcc
cctcctgtctctggggaagatagtaaatgggagcgagaaagtcaagaaacgaccagagaa
ctcctgaaagttaaagacagattaatcgaagtagaaagaaataatgctacgctgcaggca
gagaagcaagcactgaagactcaactgaagcagcttgagacgcagaacagtaacttgcag
gctcagatccttgcacttcagaggcaaacagtgtccttacaggagcagaataccactctc
caaacacagaatgccaaacttcaggttgaaaattccacccttaattcacaaagtacttca
cttatgaaccagaatgcacagcttctaatccaacagtcttccttagaaaatgaaaatgaa
tctataatcaaagaacgagaagacttgaaatctctttatgattctctgataaaagatcat
gaaaagctggaacttcttcatgaacggcaggcttcagactatgaatctctcatctctaaa
catggaaccctaaagtctgcccacaagaatcttgaggtggaacataaagaccttgaagac
cgttacaatcagttattaaaacagaaaggacagttggaagatttagaaaaaatgatcaaa
atggaacaagaaaaaatgctgcttgagagcaaaaaccatgagatggtagctgcagaatac
aagaaactttgtggtgaaaatgataggttaaatcacacatattgtcaacttttaaaagaa
actgaaattttgcaaactgaccataaaaatttgaaaagtcttttaaataattctaaattg
gaacaaacaagattagaagctgaattttcaaagctaaaggagcaatatcagcagctggat
atcacatctaccaagctaaataaccagtgtgagttgcttagccaacttaaaggaaattta
gaagaggaaaatcgccacctattggatcagatccagacactgatgctacagaacagaacg
ctgctggagcaaaacatggagagcaaggatctctttcatgttgaacaaagacagtacatt
gataaattaaatgaattgagacgacaaaaagagaaattagaagaaaaaattatggatcaa
tacaaattttatgacccatctcctcctagaaggagaggcaactggattactctaaaaatg
agaaaattgataaagtccaagaaagatattaatcgggaacgtcagaagtctctaacatta
acgcctacccgctcagactccagtgaaggatttcttcagctgcctcatcaagacagtcaa
gacagctcttcagtagggtcaaactctttagaagatggccaaaccctggggaccaagaag
agcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagac
aaaatgaaggcctgctaccgtcgttccatgtccatgaatgacctggtgcagtccatggtc
ctagcaggaggacagtggacaggtagtactgaaaatttggaggtccctgatgatatccca
acgggtaaaaggagaaaagaattgggagctatggccttctccaccacagccatcaacttt
tcacctgtcagctcttctgccgccttcagatccaagcagttggttaataataaagatact
acatcctttgaagacgtaagtccacagggtattagtgatgattctagtacgggatcaaga
gttcatgcgtcaagaccagccagccttgatagtggcagaacgtccactagcaatagcaat
aataatgcttcactccatgaagtcaaagcaggtgcagttaataaccaaagcaggccacaa
agccacagcagtggagaatttagtctgcttcatgatcatgagacttggtccagcagtggt
agcagtccaatccagtatttgaaaagacagaccaggtcaagtcctatgctccaacacaaa
atgtctgaaacagtagaaagtcgagcacatcacaagattaaagctggctccccaggaagt
gaagttgttaccttacaacagtttttggaagaaagcaacaagcttacctcaatacagttg
aagtcctcaagtcaagaaaatcttttagatgaagtcatgaaaagtttgtctgtctcttcc
gactttctgggaaaagacaagccagttagctgtgccctagccaggtcagtaagtggaaaa
actccaggggacttctatgatagacggacaactaaacctgaatttttgagacccggtcct
cgaaagactgaagatgcctactccattagttctgcagggaaacctacaccaagcactcaa
ggaaagataaaactagtaaaagaaacctctgtgtcaagacaatcaaaagatagcaatcct
tatgccactttacctcgtgcaagcagtgtgatctctactgctgaagggacaacacgaagg
accagcatccatgatcttttgaccaaggacagtagactgcctgtgtcagttgattcagca
ccgccagctgctgacagcagcatcgctgcagcctctagtgagtaccgtttacagcagtgg
tcttcggatgtgccgaatcaggctggagggcatcaggccccagatgatttagctgcagac
acagctgagtctctctatacccaggctagaaaatcaaaaccaggaaggccacattttcta
aaccaaacttttgccaccattaaaatgtctaatgatgcatttggaatatcggctaacgat
agccgtaggtcatttactgtggttcattcatctcatccatttctatccctaaacacagaa
ttggttagtaacataagtgggttaccctccaagtcactcactagagtaactgaccaggcc
tcctcctcttggggtaaggctgcacagaaacagttttgtgatagtcagaaccctagtaac
agtagcccacaatcctctgtagatagcaacaaccttactattcctgcatgcctctaccct
gaggacaccgaagttgcattatcagtttcagaggatagtcaaactgtttggtatgaatat
ggttgtgtttga
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integrated database retrieval system
