Peromyscus leucopus (white-footed mouse): 114708321
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Entry
114708321 CDS
T07241
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114708321 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pleu04812
]
114708321 (Sptbn1)
Cytoskeleton proteins [BR:
pleu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
114708321 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
114708321 (Sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
114708321
NCBI-ProteinID:
XP_028747384
LinkDB
All DBs
Position
10:4646646..4821189
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAVSPDVQGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEETESQQWDTSKGEQVSQNGLPAEQGSPRMAEATDTNEMVNGAAEQRTSS
KESSPIPSPTSDRKAKSALPAQSAATLPARTQETPAAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVTLKEAVCEVALDYKKKKHVFKLRLND
GNEYLFQAKDDEEMNTWIQAISSAISSDKHDMSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactatgacaacattgagatccagcagcagtacagcgat
gtcaacaaccgctgggatgtggatgactgggacaatgaaaacagctctgcacggctcttt
gagcggtcccgtatcaaggctctggcagatgagcgtgaagccgtacagaagaagaccttt
accaagtgggtcaactcccaccttgcccgagtgtcctgccgaatcacagacctgtacact
gaccttcgagatggacggatgctcatcaagctcctggaggtcctctccggagaaaggctg
cctaaacccacgaagggacggatgcgcatccactgtctggagaatgtagacaaggccctt
caattcctgaaggagcagagagtccatcttgagaacatgggttcccatgacattgtggat
gggaaccaccggctgaccctcggactcatctggaccatcatcctgcgcttccagatccag
gatatcagtgtagagactgaagataacaaagagaaaaagtctgccaaggatgcattgctg
ctgtggtgccagatgaagacagctgggtaccccaatgtcaacatccacaatttcaccact
agctggagggatggcatggccttcaatgcactgatacacaaacaccggcctgacctgata
gattttgataaactgaagaaatccaacgcacactacaatctgcaaaatgcatttaacctg
gcagagcagcaccttggcctcacaaaactgttagaccctgaagatatcagcgtggaccac
cctgatgagaagtccatcatcacatatgtggtcacctactaccactacttctctaagatg
aaggccttggctgtcgaagggaagcgcattgggaaggtgcttgataatgctattgaaaca
gagaaaatgattgagaagtatgaatcacttgcctctgacctcctggagtggattgaacaa
accatcatcattctgaacaatcgcaaatttgctaattcactggttggagtccagcagcag
cttcaggcattcaacacttaccgcacagtggagaaaccacctaagtttactgagaagggg
aatttggaggtgctgcttttcacaattcagagcaagatgagagctaataaccagaaggtc
tacatgccccgagaagggaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacacgagcgagagctggctctgcgcaatgagctcataaggcaggagaaactg
gaacagcttgcccgcagattcgatcgcaaggcagctatgagggagacatggctgagcgaa
aaccagcgtctggtgtctcaggacaactttggatttgaccttcccgcagttgaggctgcc
accaaaaaacatgaggccattgagacggacatcgccgcatatgaagaacgtgttcaggct
gtggtggctgtggccagggaacttgaagcagagaactaccatgacatcaagcgcattaca
gccaggaaggacaatgtcatccggctctgggaatacttgctggaattgctcagggccagg
aggcagcgcctggagatgaacctggggctgcaaaagatattccaggaaatgctttacatt
atggactggatggatgaaatgaaggtgctattgctgtctcaagactatggcaaacacttg
ctcggtgtagaagacttgttacagaagcacgccttggttgaagcagacattgcaatccaa
gcagagcgtgtaagaggtgtgaatgcctctgcccagaaatttgcaacagatggggaaggc
tacaagccctgtgacccccaggtcatccgagaccgcgttgcccacatggagttctgctat
caagagctttgtcagctggctgcggagcggagggctcgcctggaagagtcccgtcgcctc
tggaagtttttctgggagatggcagaagaggaaggctggatacgggagaaggagaaaatc
ctgtcctctgatgattatgggaaagacttgaccagtgtcatgcgcctgctgagcaagcac
cgggcatttgaggatgagatgagtggtcgtagtggccactttgagcaggccatcaaagaa
ggtgaagacatgattgcagaggaacactttggatcagaaaagatccgtgaaagaatcatt
tacatccgggagcagtgggccaacctggagcagctctcagccatccgtaagaagcgccta
gaggaggcttcattactacaccagttccaggctgatgctgacgacatcgacgcttggatg
ctagatatcctcaagatcgtctccagcaatgacgtgggccatgatgagtactccacacag
tctctggtcaagaagcataaagatgtagcagaagagatcactaactacaggcccactatt
gacacactgcatgagcaagccagtgcccttccccaggcacatgcagtgtctccagatgtg
cagggccgcctggcaggaattgaggagcgctacaaggaggtggcagagctaacacggcta
aggaagcaggctctgcaggacaccctggccctgtacaagatgttcagcgaggccgatgcc
tgcgagctctggattgatgagaaggaacagtggctcaacaacatgcagatcccagagaag
ctggaagacctggaagtcatccagcacagatttgagagcctagaacccgaaatgaacaac
caggcctcccgggttgccgtggtgaaccagattgctcggcagctgatgcacagtggccac
cccagtgagaaggagatcagagctcagcaggacaaactcaacacgaggtggagtcagttc
agagagctggtggacaggaaaaaggatgctctgctgtctgccctgagcatccagaactac
cacctcgagtgtaacgaaaccaaatcctggatccgggaaaagaccaaggtcattgagtcc
acccaagaccttggcaacgacctggcaggtgtcatggccctgcagcgcaagctgactggc
atggaacgagacttggtggccattgaggcgaagctgagcgacctgcagaaggaagccgag
aagctggagtctgagcaccctgaccaggctcaagccatcctgtctcggctggccgagatc
agtgatgtgtgggaggaaatgaagacaaccctgaagaatcgcgaggcctccctgggggag
gccagcaaactgcagcagttcctgcgggacttggatgacttccagtcctggctctccagg
acccagactgctatcgcctcagaggatatgcccaacaccctgactgaggcagagaagctt
ctcacacagcatgagaacatcaaaaatgagattgacaattatgaggaagactaccagaag
atgagggacatgggtgagatggtcacccagggacagaccgatgcccagtacatgtttctg
cggcagcggttacaggccttagacactggctggaatgagctccacaaaatgtgggagaac
agacaaaatcttctctcccagtcccatgcctaccagcagttccttcgggacacgaaacaa
gctgaagctttccttaataaccaggagtatgttttggctcatactgaaatgcccaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggacttcatgaccaccatggatgcc
aatgaggagaagatcaatgctgttgtggagacgggcagaaggctggtgagcgatggaaac
atcaactcagatcgtatccaggagaaggtggactctattgatgacaggcacaggaagaat
agagaggcagccagtgaacttctgatgagattgaaggataaccgagatctacagaaattc
ctgcaagactgtcaggagctgtccctctggatcaatgaaaagatgctcacagcccaggac
atgtcttacgatgaagccaggaaccttcacagcaaatggctaaagcatcaggcatttatg
gcagaacttgcatccaacaaagaatggctggacaagattgagaaggaaggaatgcagctc
atttcagaaaagccagaaacagaagctgtggtgaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccacccagaccaaggcccagcggctctttgatgcaaat
aaggctgagctgttcacacagagctgtgcagatctagacaagtggctccatggcctggag
agccagattcagtctgacgactatggcaaagaccttactagcgtcaatattcttctgaaa
aagcaacagatgctagagaatcagatggaagtgcggaagaaggagatcgaggaactccag
agccaagcccaggcactgagtcaggaggggaagagtaccgatgaggtggacagcaagcgc
ctcactgtgcagaccaagttcatggaacttctggagcccttgaatgagaggaagcataat
ctgttagcttccaaggagatccatcagttcaacagggatgtggaggacgaaattctgtgg
gttggcgagaggatgcctttggcaacttctacagatcatggccataaccttcaaactgtg
caactgttaataaagaaaaatcagaccctccagaaagaaatccagggacaccagcctcgt
attgatgacatctttgagaggagtcaaaacatcatcacagatagcagcagcctcaatgcc
gaagcgatcaggcagaggctggccgacctgaagcagctgtgggggcttcttattgaggag
actgagaagcgccacaggcggctggaggaggcccacagggcccagcaatactactttgat
gcagctgaagcagaagcttggatgagtgagcaggaactgtatatgatgtctgaggaaaaa
gccaaggatgagcaaagtgctgtctccatgttgaaaaagcatcagattttggaacaggct
gttgaggactatgcagagacagtacaccagctctccaaaactagccgagccctggtagct
gacagccatcctgaaagcgagcgtattagcatgcggcagtcaaaagtggataagctatac
gctggcctgaaggatcttgctgaagaaaggagaggaaaacttgacgagaggcacaggctg
ttccagctcaacagggaggtcgacgacctggagcagtggattgctgagagggaagtggtc
gcagggtcccatgagttgggacaggactatgagcatgtcacgatgttacaagaacggttc
cgagaatttgctcgagacacaggaaacattgggcaggagcgtgtggatacagtcaatcat
atggcagatgacctcatcaactctggacattcagatgctgccaccattgctgagtggaaa
gatggtctcaatgaagcctgggctgacctcctggagctcattgacacgagaacacagatt
cttgctgcctcctatgaactgcataagttttaccatgatgccaaggagatctttggccgc
atccaggacaaacacaagaaactccctgaggagcttggaagagatcagaacacagtggag
accttacagagaatgcacaccacctttgagcatgacatccaggctctgggcactcaggtg
aggcagctgcaagaggatgcagcccgcctccaggcagcctacgcaggggacaaggccgat
gacatccagaagcgtgagaatgaggttctggaagcctggaagtccctgctggatgcttgt
gagggtcgcagggtgcggctagtggacacgggagacaagttccgcttcttcagcatggtg
cgtgacctcatgctctggatggaagatgtcatccggcagattgaggcccaggagaaaccg
cgggatgtgtcatctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgcaacgacagctttacaacttgcattgaacttgggaaatccctgctggcaagg
aaacactatgcttctgaggagatcaaggaaaagttactgcagttgacggaaaaaagaaaa
gaaatgattgacaagtgggaagaccgatgggaatggttaagactgattttggaggtccat
cagttctcaagggatgccagtgtggctgaggcttggctgcttgggcaggagccatacctg
tccagccgcgaaattggccagagtgtggatgaagtggagaagctcatcaagcgccacgag
gcatttgaaaagtctgcagcaacctgggatgagagattctctgccctggaaagattgaca
acattggagctactggaagtgcgaagacagcaagaggaagaagaaagaaagaggcggccg
ccttctccagagccaagcacgaaggtttccgaggagactgagtcccagcaatgggatact
tcaaaaggagaacaagtttcccagaatggtttgccggctgaacagggatctccacggatg
gcagaagccacggacacaaatgaaatggtcaacggtgctgcagagcagagaacgagctcc
aaagagtccagtcccatcccctctcccacctctgaccgcaaggccaaatctgcacttcca
gcccagagtgctgccaccctgccagccaggacccaagagacaccggcggcccagatggaa
ggcttcctcaatcggaagcacgagtgggaggcccacaataagaaagcctcgagcaggtcc
tggcacaatgtctattgtgtcataaataaccaagaaatgggcttctataaagatgccaag
agtgctgcttctggcatcccctaccacagtgaggtccctgtgactttgaaagaggctgtc
tgtgaagtggcccttgattacaagaagaagaagcatgtgttcaagctaagactaaatgat
ggcaatgagtacctcttccaagccaaagatgacgaggaaatgaacacatggatccaggcc
atctcctccgccatctcctctgacaaacatgacatgtccgccagcacccagagtacgcca
gcatccagccgggcgcagaccttgcccaccagcgtcgtcaccatcaccagcgagtctagt
cccggcaagagggagaaggacaaagagaaagacaaagagaagcggttcagcctttttggc
aaaaagaagtga
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integrated database retrieval system
