Peromyscus leucopus (white-footed mouse): 114708481
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Entry
114708481 CDS
T07241
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03018
RNA degradation
pleu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114708481
09123 Folding, sorting and degradation
03018 RNA degradation
114708481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114708481
03041 Spliceosome [BR:
pleu03041
]
114708481
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114708481
mRNA degradation factors
5'-3' decay
Lsm complex
114708481
Spliceosome [BR:
pleu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114708481
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
114708481
NCBI-ProteinID:
XP_037067792
LinkDB
All DBs
Position
17:14997092..15011765
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AA seq
133 aa
AA seq
DB search
MTASGFCHLDLVDDNLVFVITLPAPPLPKWFVSACFIIATGKKTKASNKSSLYSVYGKQT
PSDFLKQIIGRPVVVKLNSGVDYRGVLACLDSYMNIALEQMEEYVNGQLKNKYGDEFIRG
NNVLYISTQKRSM
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttcaggtttctgccaccttgaccttgtggatgataacttggtttttgtgata
acccttcccgctcccccactccccaagtggtttgtgtcagcatgttttatcatagcaaca
ggaaagaaaaccaaagcatccaacaagtcttccctgtattctgtctatgggaagcaaacc
cctagtgacttcttaaagcaaatcatcggacgaccagttgtggtgaaactaaattctgga
gtggattatcgaggggtcctggcctgcctggatagctacatgaatatagcattggaacag
atggaagagtatgtaaatggacagctgaagaataagtatggggatgagttcatccgagga
aacaatgtgctgtatataagtacccagaagagaagtatgtga
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