Peromyscus leucopus (white-footed mouse): 114708752
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Entry
114708752 CDS
T07241
Symbol
Acin1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013
Nucleocytoplasmic transport
pleu03015
mRNA surveillance pathway
pleu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114708752 (Acin1)
09122 Translation
03013 Nucleocytoplasmic transport
114708752 (Acin1)
03015 mRNA surveillance pathway
114708752 (Acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114708752 (Acin1)
03041 Spliceosome [BR:
pleu03041
]
114708752 (Acin1)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114708752 (Acin1)
Spliceosome [BR:
pleu03041
]
Complex C
Other components
EJC/TREX
114708752 (Acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
114708752
NCBI-ProteinID:
XP_028748082
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Position
9:69146134..69191061
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AA seq
1234 aa
AA seq
DB search
MLENLQKHSTPHAAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEAS
AESEDEMIHPEGVASLLPPDFQSSLERPELELSRHSPRKSSSFSEEKGESDDEKPRKGER
RSSRVRQARAAKLSEYSQAAEEEEDQETPSRNLRVRVDRNLKVEEEEEEEEEEEEEEEEE
EVDEGQKSREAEAPILKQLEDEEGEEEMPRAKPEKVVDEKPHIIRSQEGGGLEKGGRVTR
SQEEARRSHLARQQQEKDTQVVSVLQEANEVKSSQGLEERSQSPSPPPLTEDLEKAPVVL
PPEHTVSEEETPPPLLTKEASSPPAHMQLQDEEEVEPVEGPAPPVLIQLSPRNTDPESRE
LIMSPHPVQLVRGLSPLPSTPDTKAESPAEKVSDESVLPLAQKSALFEYSAQKGLETEPE
KSAPSLPPTVEELAPTKGTPEEPVKKQALEQEGRRASHTLFPDHSLKQSADSSSSRSSSP
SSSSSRSRSRSPDSSASHPQSSPRSKQRDVSQARVHANPHGRIKMDSRSTSESRSRSRSR
SRSASSSSRKSVSPGVSRDSNTSYTETKDPSCGQEAAAPPVPQLQVLEPKEKTPPSSASV
RGRHLSQPEPEQKHVIQRLQPEQGSPKKCEAGEAEPPAATQPQTSEIQISHLPESERIHH
TVEEKEEVTMDTSENRPEKEVPEPPAPIADQVGNDDRPEGNAEEEEKKESSMPKSFKRKI
SVVSATKGVQAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQ
EAVVDLHADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEKEPE
PEPPGPPQVSVEVALPPPVEQEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSP
PRGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVAT
RTALHGVKWPQSNPKFLCADYAEQDELDYHRGLLVDRPSETKTEDQGAPRPLHPPPPPPV
QPPPHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRR
KERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTESQIVQKEAEQAERA
KEREKRRKEREEEEQKEREKEAERERTRQLEREKRREHSRERERERERERDRGDRDRERE
RDRDRGRERDRRDAKRHSRSRSRSTPVRDRGGRR
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgctagaaaatttacagaaacactcaacaccccatgctgcattccagccaaattcacag
attggggaggaaatgagccagaacagtttcataaagcagtacctggaaaagcagcaggag
cttctgaggcagcgtctagaacgggaagctcgcgaggctgcagagcttgaagaagcttca
gctgagtcggaggacgagatgatccatcctgagggagtggcttccctgctgcctcctgac
tttcagagcagcctggagagaccagagctggagctcagcagacattcgcccagaaagagc
tcttctttttctgaagaaaaaggtgaatcagatgatgagaaaccaaggaaaggagaaaga
cgttcatccagggttagacaggcaagagcagctaaactctctgagtacagccaggctgct
gaggaggaagaagatcaagaaacaccatctagaaacctgagagtcagagtagatcgaaat
ttaaaagtagaggaggaagaagaggaagaagaggaggaggaggaagaagaagaggaggaa
gaggtagatgagggacaaaaatctagagaggcagaggcaccaatcctgaaacagttggag
gatgaagagggagaagaagagatgcccagagcaaaaccagaaaaggtggtagatgagaaa
ccccacatcataagatcccaggaagggggtgggttagagaaaggagggcgggttacgaga
tcccaggaagaagctagaagaagtcacctggccagacagcagcaagagaaagacacacaa
gtagtgtctgtccttcaggaagctaatgaagtcaagtcctcacaaggcttggaggaaaga
tcgcagtctccttccccacctccactcactgaagacctagagaaggcccctgttgtgctt
ccgccagagcacacagtcagtgaagaggaaactcccccacctttacttactaaggaagcg
tcatctcctccagctcatatgcaactccaggacgaggaagaggtagagccagtggaaggc
ccagcaccccctgtcctcattcagttatcgcctcgtaatacagatcctgaaagtagggag
ctaataatgtctcctcatcctgtccagttggtgagaggcctgtctcctttgcccagtact
ccagacaccaaagcagaatctccagcagagaaagtgtcagatgagagtgtcctgcctctg
gctcagaaaagtgcactgtttgaatactcagcccagaagggtcttgaaactgagcctgaa
aaatctgctccctccctccctccaacagtagaggaattagcacccaccaaagggacccct
gaggaacctgtgaaaaagcaggctttagaacaggagggcagaagagcttcccacactctt
ttcccagaccatagtttgaaacagtcagctgactcgtcctctagccggtcctcctcgcct
tcatcctctagctctagatccagatctcgctctcctgatagttcagcctcccacccacag
tcatctccaagatctaaacagagagatgtatcccaagcacgagtacacgccaaccctcat
ggtagaatcaagatggactccaggtcaacatcagagtccaggtcacggtcccgatcccgt
tcccgttcagcgtcaagcagcagcagaaaatctgtgagccctggagtctccagagacagc
aacaccagctacactgaaaccaaagacccctcctgtggtcaggaggctgcagctccacca
gtgccacagctgcaggtccttgaaccaaaggagaagactcccccgtcctcagcctctgtc
cggggaaggcatctgagccagcctgagccagagcaaaagcatgtgatccagaggttacag
cctgagcaggggagcccaaagaagtgtgaagctggagaggcagagccaccagctgccaca
cagcctcaaacctcagagattcagatctctcatctcccagaatcagaaaggattcatcac
actgttgaagagaaggaggaagtgaccatggacacaagtgaaaacagacctgaaaaggag
gttccagagcctcctgcgcccatcgcagaccaagtcggcaatgacgaccgcccagagggc
aatgctgaagaagaggagaagaaagagagttcgatgcccaaatcattcaagaggaaaatc
tccgttgtctcagctaccaagggggtgcaagctggaaacagtgacacagaggggggccag
cctggtcgaaaacgacgttggggagccagcacagccaccacacagaagaagccttccatc
agtatcacgaccgagtcactcaagagcctcatccccgacatcaaacccctggcggggcag
gaggctgttgtggatcttcatgctgacgactcccgaatctctgaggatgagacagagcgt
aatggtgatgatggaacccacgacaaaggactgaaaatatgccggacagtcactcaggtg
gtacctgcagagggccaggagaatgggcagagggaagaggaagaagagaaggagcctgaa
ccagaaccccctggacctccccaggtgtcagtagaggtggccttgcccccacctgtggag
caggaagtaaagaaagtaacattaggagacaccctaacccgaaggtccattagccagcag
aagtctggagtttccattacaattgatgacccagtccggactgcacaggtgccctcccca
cccaggggcaagatcagtaacattgtccatatctccaacttggttcgtcccttcacgtta
ggccagctgaaggagttgctggggcggacgggaactttggtagaagaggccttctggatt
gacaagatcaaatctcattgctttgtaacgtactcaacagtagaggaagccgtggccacc
cggaccgctctccatggggtcaagtggccccagtccaaccccaaattcctctgtgctgac
tatgctgagcaggacgagctggactatcaccggggactcttggttgatcggccttcggaa
actaagacagaggatcagggagcacccaggcccctgcaccccccgcccccacccccagtg
cagccccctccccacccccgggcagagcagcgcgagcaggagcgcgctgtccgggagcag
tgggcagagcgggagcgagaaatggaacggcgggagagaacgcggtctgagcgggagtgg
gaccgggacaaagttcgagaggggccccgctcccgatcccggtcccgtgaccgccgccgc
aaggagcgtgccaagtctaaagagaagaagagcgagaagaaagaaaaggctcaggaggag
cctcctgctaaactgctggatgaccttttccgtaagactaaggcagctccctgcatctat
tggctcccactgactgagagccagattgtacagaaggaggcagagcaggctgaacgggcc
aaggagcgggagaagaggagaaaggaacgagaggaggaagaacagaaggagcgggagaag
gaagctgagcgggaacgcacccgacagctagaacgggagaagcggagagagcacagcagg
gagagggagcgggagagggagcgagagcgggacaggggggaccgagaccgcgagagggaa
cgagaccgagaccggggcagggagagggatcgcagagacgccaagcgccacagcagaagc
cggagtcgaagcacacctgtacgggaccggggtgggcgccgctag
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