Peromyscus leucopus (white-footed mouse): 114709027
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Entry
114709027 CDS
T07241
Symbol
Tnc
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin
KO
K06252
tenascin
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04151
PI3K-Akt signaling pathway
pleu04510
Focal adhesion
pleu04512
ECM-receptor interaction
pleu04518
Integrin signaling
pleu05165
Human papillomavirus infection
pleu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
114709027 (Tnc)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114709027 (Tnc)
04518 Integrin signaling
114709027 (Tnc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114709027 (Tnc)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
114709027 (Tnc)
09172 Infectious disease: viral
05165 Human papillomavirus infection
114709027 (Tnc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pleu00536
]
114709027 (Tnc)
Glycosaminoglycan binding proteins [BR:
pleu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114709027 (Tnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
fn3
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
Fn3_VIN3
DUF7949
EGF
NDNF
fn3_2
Interfer-bind
DUF4998
hEGF
Motif
Other DBs
NCBI-GeneID:
114709027
NCBI-ProteinID:
XP_037058559
LinkDB
All DBs
Position
2:complement(72571222..72662669)
Genome browser
AA seq
2202 aa
AA seq
DB search
MGAMTWLLPGIFLALLAHTSEGGVIKKVIRHKRQSGVNMTLPEENQPVVFNHVYNIKLPM
GSQCSVDLESVNGEKDLTPTPESSGSFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVK
ELLSRLEELEMLVSSLREQCTMGTGCCLQPAEGRLDSRPXCSGRGNFSAEGCGCVCEPGW
KGPNCSEPECPGNCNLRGQCLDGQCVCDQGFTGEDCSQLACPNDCNDQGRCVNGVCVCFE
GYAGVDCGLEVCPVPCSEEHGMCVDGQCVCKDGFAGDDCNEPLCLNNCYNRGRCVENECV
CDEGFTGEDCSELICPNDCFDRGRCVNGTCYCEEGFTGEDCGELTCPNNCQGHGQCEEGQ
CVCDEGFAGADCSEKRCPADCHHRGRCLNGQCECDDGYTGADCGDLQCPNGCSGHGRCVN
GQCVCDEGYAGEDCSQQRCPNDCHNRGLCVQGKCICEQGFKGFDCSEMSCPNDCHGHGRC
VNGMCVCDDDHTGEDCRDRRCPRDCSQRGHCVAGQCICEDGFTGPDCAELSCPNDCHGHG
RCVNGQCICHEGFTGKDCKEQRCPSDCHGQGRCEDGQCICHEGFTGLDCGQRSCPSDCSN
LGQCVSGRCICNEGYMGEDCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLIMYTPTH
ADGLEMQFRVPGDQTSTTIRELEPGVEYFIRVFAILENKRSIPVSARVATYLPAPEGLKF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEEEITKSLRRPETSYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKKVTTTRLDAPSQIEVRDVTDTTALITWFKPLAEIDSIELSYGIK
DVPGDRTTIDLTHEENQYSIGNLKPDTEYEVSLVSRRVDMSSNPAKETFTTGLDAPKNLR
RVSQTDSSITLEWRNVKADIDSYRIKYAPISGGDHAEADVPKSQQATTKTTLTGLRPGTE
YGVGVSAVKGDKESDPATINAATEIDAPKDLQVSETTQDSLTLFWKTPLAKFDRYRLNYS
LPTGQSIEVQLPKDATSHVLTDLEPGQEYTLLLTAEKGRHKSKPARVKASTEQAPSLENL
TVTEAGWDGLRLNWTADDLAYEYFVIQVQEANKVEAAHNFTVRGNLRAADIPGLKAATPY
RVSIYGVARGSRTPVLSAEASTGKTPDLGEVSVAEVGWDALKLNWTAPEGAYQNFFIQVL
EADTTQPVQNVTVPGGLRSVDLPGLKAATRYHVTIRGVTQDFSTAPLSIEVLTEELPHLG
SLSVTEVSWNSLRLNWTAGDLAYEYFVIQVQEANNVEAAQNLTVPGSLRAVDIPGLKAAT
PYRVSIYGVIQGYRTPMLSADASTAKEPEIGNLTVSDITPESFNLSWTATDGIFDMFTIE
IIDSNRLLQTAEHNISGAERTAHISGLPPSTDFIIYLSGIAPSIRTKTISTTATTEPEPQ
LSTLILSNITPDSFNVSWTTQAGLFAKIVINVSDAHSLHESQQLTVPGDAQQAHITGLVE
NTAYDVSVTGTTWAGDPTRPLTAFVVTEALPLLENLTISDTNPYGFTVSWMASENAFDSF
VVTVVDSGKLLDPQEFTLSGTQRKLELRGLITGIGYEVLVSGFTQGHQTKPLRAEAVTEA
EPEVDNLLVSDVTPGGFRLSWTADEGIFDSFVLRIRDTKKQSEPQEITLPSPERTRDITG
LREATEYEIELYGISGGRRSQPVSAIATTAMGSPKEIMFSDITDSAATVSWKAPTAQVEN
FRITYVPMTGGAPSMVTVDGTDTETRLVKLTPGVEYHVSIIAMKGFEESDPVSGSLTTAL
DGPSGLLAANITDSEALAMWQPAIAAVDSYVISYTGERVPEVTRTVSGNTVEYELHDLEP
ATEYTLRIFAEKGHQKSSAITTKFTTDLDSPRDLAATEIQSETALLTWRPPRASVTGYLL
VYESLDGAVKEVIVGPDATSYSLADLSPSTHYTVRIQALNGSLRSRLIQTIFTTIGLLYP
FPRDCSQAMLNGDTTSGLYTIYINGDKSQALEVYCDMTSDGGGWIVFLRRKNGREDFYRN
WKAYAAGFGDRREEFWLGLDNLSKITAQGEYELRVDLQDHGESAFAVYDRFSVGDAKSRY
KLKVEGYSGTAGDSMNYHNGRSFSTYDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYG
DNNHSQGVNWFHWKGHEYSIQFAEMKLRPSSFRNLEGRRKRA
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atgggggccatgacctggctattgccaggcatctttctagctttgcttgcccacacttct
gaaggtggggtcatcaaaaaagtcatccggcacaagcgacagagtggagtaaacatgacc
ctgccagaggagaatcagccagtggtgttcaaccacgtctacaacatcaagttgcccatg
ggctctcagtgctcagtggatctggagtcagtgaatggagagaaagacctaacccccacc
ccagagtccagtggaagcttccaggaacacacagtggatggagaaaaccagattgtgttc
acacaccgcatcaacatcccccgccgggcctgtggctgtgctgcagctccggatgtgaag
gagctcctgagcaggttggaggagctggagatgctggtatcttctctaagggagcagtgc
accatgggtacaggctgttgtctccaacctgcagaaggacgtctggactctaggcctntc
tgcagtggccgaggcaacttcagcgccgaaggatgtggctgtgtctgtgaaccaggctgg
aaaggccccaactgctctgagcccgaatgtcccggaaactgtaacctccgaggccagtgc
cttgacggacagtgtgtctgtgaccagggtttcacgggtgaggactgcagccagctggcc
tgtcccaatgactgcaacgaccagggcaggtgtgtgaacggagtctgtgtgtgctttgaa
ggctatgccggggttgactgtggcctagaagtctgcccggtgccctgcagtgaggaacat
gggatgtgtgtggacggccaatgtgtgtgcaaggatggctttgctggtgatgattgcaat
gagcccctgtgcctcaacaactgctacaaccgtgggcggtgcgtagagaacgagtgcgtg
tgtgatgagggcttcacaggtgaggactgcagtgagctcatctgccccaatgactgcttc
gaccgcggccgctgcgtcaacggcacctgctactgtgaggaaggtttcacgggcgaagac
tgcggtgagctcacctgccccaacaactgccagggccatggccagtgcgaggagggacag
tgtgtttgcgacgagggctttgccggtgcagactgcagtgaaaagcggtgtcctgcagat
tgccaccaccgcggccgctgcctcaatggtcagtgtgagtgtgatgatgggtacacaggg
gccgactgtggggacctacagtgccccaacggctgcagtgggcatggccgctgcgtcaat
gggcagtgtgtgtgtgatgagggctacgctggagaagactgcagccagcagcgatgcccg
aatgactgccacaaccggggcctttgtgtacagggcaagtgcatatgtgaacaaggcttc
aagggctttgactgtagtgagatgagctgtcccaatgactgccacggccacggccgctgt
gtgaacggcatgtgcgtctgtgatgatgaccacactggggaagactgcagagaccgccgc
tgtccccgggactgcagccagcggggccactgtgtggctggacaatgcatatgtgaggat
ggcttcaccggccctgactgtgctgagctctcctgccccaatgactgccatggtcacggc
cgctgtgtgaatggccagtgcatctgccatgagggcttcactggcaaagactgcaaagag
caaaggtgccccagtgactgccatggccaaggccgctgtgaggatggccagtgcatctgt
catgaaggcttcacaggcctggactgtgggcaacgctcctgccccagtgactgcagcaat
ctgggacaatgtgtttcaggccgctgcatctgcaatgaaggctacatgggcgaagactgc
tctgaggtgtcccctcccaaagaccttattgtgacagaagtaacagaagagactgtaaac
ctggcatgggacaatgagatgcgggtcactgagtatctcattatgtacacacccacccat
gctgatggcctggagatgcagttccgtgtgcctggggaccagacatccactaccatccgg
gagctggagccaggagtggagtacttcatccgtgtgttcgccatcttggagaacaagagg
agcatccctgtcagtgccagggttgccacctacttgcctgcacccgaaggactaaaattc
aagtctatcaaggagacatccgtggaagtagagtgggatcctctagacattgcttttgag
acttgggagatcatcttccggaatatgaataaagaagatgaggaagagatcaccaaaagc
ttgaggcgaccagagacctcttaccgacaaactggccttgctcctgggcaagaatatgaa
atatctttgcacattgtgaaaaacaacacccgaggcccaggcttgaagaaagtgaccaca
acccgcttggatgcccccagccagatcgaggtgagagacgtcacagacaccacagcattg
atcacctggttcaagcccctggctgagattgatagcatcgagctctcctatggcatcaag
gacgtgcctggagaccgcaccaccattgacctcacacatgaagagaaccagtattccatt
gggaacctgaagcctgataccgagtatgaggtgtcccttgtctcccgaagggtggacatg
tcgagcaaccctgccaaggagaccttcaccacaggcctggatgcgcccaagaatcttcgc
cgtgtctcccagacagacagcagcatcaccctggaatggcggaatgtcaaagcggacatc
gacagttacagaattaagtacgcacctatctcaggaggtgaccatgctgaggctgatgtt
ccaaagagccagcaagccacaaccaaaaccactctcacaggtctgaggccaggaactgaa
tatggggttggtgtttctgctgtgaagggagacaaggagagtgatccagcaaccatcaat
gccgccacagaaattgatgcacccaaggacttgcaggtgtctgaaaccacacaggacagt
ctgactctattctggaagacaccattggccaagtttgaccgataccgcctcaactacagc
ctccccacaggccagtctatagaggtccagttgccaaaggatgctacctcccatgtcctg
acagatctggagccagggcaagaatacactctcctcctcactgccgagaagggcaggcac
aagagcaagcctgcacgtgtgaaggcatccacagaacaagcgccttccctggaaaatctc
accgtgactgaggccggctgggatggcctcagactcaactggactgcagatgacctggcc
tatgagtactttgtcattcaggtgcaggaggccaacaaggtggaggccgctcacaacttc
acagtacgtggcaacctccgggctgcagacatcccgggtctcaaggctgccactccttat
agagtctccatctatggggtagccagaggctctcgaacaccagtgctctctgctgaggcc
tccacagggaaaactcccgatttgggagaagtctctgtcgccgaggtgggctgggatgcc
ctcaagctcaactggactgctccagaaggggcctatcagaactttttcattcaggtgcta
gaggctgacacgactcagcctgtccagaacgtcacagtccctggaggactgaggtcagtg
gacctgcctgggctcaaagcggccactcgctatcacgtcaccatccgaggggtcactcag
gacttcagcacggcccctctctctattgaagtcttgacagaggagctccctcatttggga
agcttatccgtgactgaggtcagctggaatagcctcagactcaactggactgcaggtgac
ctggcctatgagtactttgtcattcaggtgcaggaggccaacaatgtggaagctgctcag
aatctcacagtgcccggcagcctcagggctgtggacatcccgggtctcaaggccgccact
ccttatagagtctccatctatggggtgatccagggttatagaacaccaatgctctctgct
gatgcctccacagccaaagaacctgaaattggaaatttaactgtttctgacatcactccc
gagagcttcaatctctcttggacggcaaccgacgggatcttcgacatgtttactattgaa
attattgattccaataggttgctgcagacggcagaacataatatatctggtgctgaacga
actgcccacatctcagggcttccccctagtactgatttcattatctacctctctggaatt
gctcccagcatccggaccaaaaccatcagtaccacagccaccacagagccagaaccacag
ttgagcacgctaatccttagcaatattactcctgacagcttcaacgtgtcatggaccaca
caagctgggctttttgcaaagattgttatcaatgtgagcgatgctcattcactgcatgag
tctcagcaactcacagtcccgggagatgcacagcaagctcacatcacgggcttggtggag
aacactgcctatgatgtcagtgtgacagggaccacctgggctggtgaccccaccagaccc
ctcactgcctttgttgttacagaggccttgccccttctggaaaatttaaccatttccgac
actaatccctacgggttcacagtttcctggatggcatcggagaatgcctttgacagcttt
gtagtaacggtggtggattctgggaagctgctggacccccaggaattcacactttcagga
acccagaggaagctggagcttagaggcctcataactggtattggctatgaggtcctggtc
tctggcttcacccaagggcatcaaaccaagcccttgagggctgaggctgttacagaagct
gaaccggaagttgacaaccttctagtttcagatgtcactccaggcggtttccgtctgtcc
tggactgctgatgaagggattttcgacagttttgttctcaggatcagagatactaaaaag
caatccgaaccacaagaaataaccctcccttcccccgaacgtaccagggacataacaggt
ctcagagaggccactgagtatgaaattgaactctatggaataagcggtggaaggcgatcc
cagccagtcagtgccatagcaacaacagccatgggttctccaaaggaaatcatgttctca
gacatcactgacagcgcagccacggtcagctggaaggcacctactgcccaagtggagaac
ttccggattacctatgtgcctatgacaggaggtgccccctccatggtgaccgtggatgga
actgatactgagacccgtctggtgaagctcactcctggggtggagtaccacgtcagcatt
attgccatgaagggctttgaagaaagtgatcccgtctcggggtcactaaccacagctctg
gatggtccatccggcctgctggcagcgaacatcacagactccgaagccttggccatgtgg
cagccagccattgccgctgtggacagttacgtcatctcctacacaggggagagagtgcca
gaagttacacgcacagtgtctgggaacacagtggagtatgaactacatgatctggagcct
gccacagagtacacactgaggatctttgcagagaaaggccaccagaagagttctgccatc
actaccaagttcaccacagacctcgattccccaagagacttggctgctactgagattcag
tcggaaactgccctcctcacctggagacctccccgggcatcagttacgggttacctcctg
gtctatgaatctctggatggtgcagtcaaggaagtcattgtgggaccggatgccacctcc
tacagcctggcagacctgagtccatccacccactacacagtgaggatccaagcactgaat
ggatccctaaggagcaggctgatccaaaccatctttaccacaattggactcctgtaccca
ttccccagggactgctctcaagcaatgttgaatggtgacaccacctccggcctctacacc
atctacataaatggtgacaagagccaagcactggaagtctactgcgatatgacctctgat
ggaggtggatggatcgttttcctgagacgcaaaaatggacgtgaggacttctatcgaaat
tggaaggcctatgccgctgggtttggggaccgcagagaagaattctggcttggactggat
aacctgagcaaaatcacagcccaaggggagtacgagctccgggtggacctacaggaccat
ggggagtcagcctttgctgtgtatgacaggttcagtgtgggagatgccaagagtcgctac
aagctcaaagtagaaggatacagcggaacagcaggtgactccatgaactaccacaatggc
agatccttctccacctatgacaaggacacagactcggccatcaccaactgtgctctgtcc
tacaaaggagctttctggtataagaactgtcatcgtgtcaacctgatgggcagatatggg
gacaacaaccacagtcagggtgttaactggttccattggaagggccacgagtactccatc
cagtttgctgagatgaagctgagacccagcagcttccgaaatcttgaaggcaggcggaag
cgagcataa
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integrated database retrieval system
