Peromyscus leucopus (white-footed mouse): 114709214
Help
Entry
114709214 CDS
T07241
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu01524
Platinum drug resistance
pleu03430
Mismatch repair
pleu05200
Pathways in cancer
pleu05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114709214 (Msh2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
114709214 (Msh2)
09162 Cancer: specific types
05210 Colorectal cancer
114709214 (Msh2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
114709214 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pleu03400
]
114709214 (Msh2)
DNA repair and recombination proteins [BR:
pleu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114709214 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_27
Tex_central_region
Motif
Other DBs
NCBI-GeneID:
114709214
NCBI-ProteinID:
XP_028748750
LinkDB
All DBs
Position
22:complement(17555126..17615793)
Genome browser
AA seq
942 aa
AA seq
DB search
MAVQPKETLQLEGPAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYMGPAGAKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGSKATKENDWYLA
FKASPGNLSQFEDILFGNNDMSASVGVVGIKMSMVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETSGDMGKLRQVVQRGGVLITERKRADFSTKDICQD
LNRLLKGKKGEQTNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDMAAVRALNLFQGSVEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLLDKNRIEERL
DLVEAFVEDSELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPSVIQA
LKKYQGRHQALLTAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREVMDSLEKKMQATLISAARGLGLDAGKQIKLDSSAQFGYYFRVTCKEERVLRNNKNFS
TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNAAPVPYVRPVILEKGTGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSILDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALASQIPTVNNLHVTALTSEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECARQKALELEEFQNIGTFQGRDEMEPPAKKCYLEERLVILALVTGPLLCVSGTMMSLA
SPTGFQYLIIGHSYWFIFLSITKTYPWVGCWWWLGCFVLFHF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggagggcccggccgaggcgggcttcgtg
cgcttctttgagggcatgccggagaagccgagcaccacggtgcgcctcttcgaccgcggc
gacttctacacggcgcacggcgaggacgcgctgctggcggcccgcgaggtgttcaagacc
cagggcgtgatcaagtacatggggccggcaggggccaagaccctgcagagtgttgtgctt
agtaaaatgaattttgagtcctttgtgaaagaccttcttctggttcgtcagtacagagtt
gaagtttataagaataaagccggaagtaaggccaccaaggagaacgactggtacttggca
tttaaggcttctcctggcaatctttctcagtttgaagacattctgtttggtaacaatgac
atgtcagcgtccgttggcgtcgtgggtattaaaatgtccatggtcgatggccaaagacag
gttggagttgggtatgttgattccatccagaggaagctgggactatgtgagttccctgat
aacgatcagttctccaaccttgaggctcttctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagacttccggtgacatggggaaactgaggcaggttgttcagagagga
ggggttctgatcacagaaagaaagagagccgacttttccactaaagacatttgtcaggat
ctcaaccggttattaaaaggcaagaaaggagagcagaccaatagtgctgtcttaccagag
atggagaatcaggttgcagtttcatcattatccgcagtcatcaagtttttagagcttctg
tccgatgactccaatttcggacagtttgaactgacgacttttgacttcagccagtacatg
aagctggacatggcagcagtcagagccctcaaccttttccagggttctgttgaagacacc
actggctcccagtctctggctgcattactgaacaagtgcaaaactgcccaaggacagaga
ttggtcaaccagtggatcaagcagcctctcctggacaagaacagaatagaagagagatta
gatttagtggaagcttttgtagaagattcagaactgaggcagactttacaggaggatttg
cttcgtcgctttccagatcttaaccgacttgccaagaagtttcagagacaagccgcgaac
ttacaggactgttaccggctgtatcagggtgtgaaccagctccccagcgtcatacaggct
ctgaagaaataccaaggaagacaccaggcattgttgacggccgtttttgtgactcctctt
actgatcttcgttctgatttttcaaaatttcaagaaatgatagaaacaactttggatatg
gatcaggtggaaaaccatgagttccttgtaaaaccttcatttgatcctaacctgagtgaa
ctaagagaagtaatggatagcctggaaaagaagatgcaggctacgttaataagtgctgcc
cggggtcttggattggatgccggcaaacagattaaattggattccagcgcacagtttgga
tattattttcgtgtgacctgcaaggaagaaagagtccttcgaaacaataagaacttcagc
acagtggacattcagaagaacggagttaagtttaccaacagtgaactctcttctttaaat
gaagaatatactaagaataaaggcgagtatgaggaggcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtggagccaatgcagacgctcaatgatgtgttagct
cagttagatgccgtggtcagctttgctcacgtctcaaatgccgcacccgttccttacgta
cggccagtcatcttggagaaaggaacaggaagaattatattgaaagcctccaggcacgct
tgtgttgaagttcaagatgaagttgcctttattccgaatgatgtgcattttgaaaaggat
aaacagatgtttcacatcatcactggtcccaatatgggaggtaaatcaacatacatccgt
caaactggggtgattgtgctcatggcccagatcgggtgttttgtgccgtgtgagtcagca
gaggtgtccattttggattgcatcttggctcgagttggggctggtgacagtcagctgaaa
ggtgtctccacgttcatggctgaaatgctggagactgcatctatcctcaggtcagcaacc
aaagattccttaatcatcattgacgaactgggaagaggaacatctacttacgatggattt
gggttagcctgggctatctcagagtacattgcaacgaagattggtgccttttgcatgttt
gcaacccatttccatgaactcactgctttggccagccagataccaactgtcaacaatctg
catgtcacagcgctaactagtgaagaaaccttaactatgctttaccaagtgaaaaaaggt
gtctgtgatcagagttttgggattcacgtggctgagcttgctaatttccctcggcatgtg
attgagtgcgccagacagaaagctctggaacttgaggagtttcagaacattggaaccttc
cagggacgggatgaaatggaaccacctgccaagaagtgctacctggaagagaggttggtc
atcttggctttagttactggtcctctgttgtgcgtatcgggaaccatgatgagtctggct
tcccctacagggttccagtacttgattattggtcattcttactggttcatatttcttagc
ataaccaaaacatatccctgggttggttgttggtggtggttgggttgttttgttttgttt
catttttga
DBGET
integrated database retrieval system
