Peromyscus leucopus (white-footed mouse): 114709444
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Entry
114709444 CDS
T07241
Symbol
Chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114709444 (Chd2)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114709444 (Chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
114709444
NCBI-ProteinID:
XP_028749120
LinkDB
All DBs
Position
1:139619893..139755038
Genome browser
AA seq
1840 aa
AA seq
DB search
MAHKPGEEHLSLSPCIFTWYQTFSQLTFEEEKLSHSASEEASGSDSGSQSESEQGSDPGS
GHGSESNSSSESSESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVY
GVRRSNRSRQEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKQDPSEDEHEQGTSAE
SDPEQKRVTARRPVPRRTVPKPPVKKQPKTQRGKRKKQESSDDDDDDDEAPKRQTRRRAA
KNVSYKEDDDFETDSDDLIEMTGEGIDEQQDNSETIEKVLDSRLGKKGATGASTTVYAVE
ANGDPSGDFDTEREEGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDE
IKQWLGKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTGKSALGQTDFPAHSRKPAP
SNEPEYLCKWMGLPYSECSWEDEALIGKKFQNCIDSFHSRNNSKTIPTRECKALKQRPRF
VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF
HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL
KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSSHRLLITGT
PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEK
SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYL
IKAPEENERENGQEVLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL
TIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDS
DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTG
RTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEIEGEESEPQEMDIDEILRLAETREN
EVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEI
YMLPRIRSSTKKAQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDL
VEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQE
YEEQLKENASEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYC
LSCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQG
KQLQTRVDYLLKLLRKGLEKKGTVTSGEETKLKKRKPRVKKENKAPRLKDEHGLELSSPR
HSDNQSEEGEVKDDGLEKSPTKKKQKKKENKENKEKPVSSRKDREGDKERKKSKDKKEKV
KGGDAKSSSKSKRAQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLD
KPDKGLNVQEQLEHTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTEFDARK
LHKLYKMAHKKRSQEEEEQKKKDDTLGGKKPFRPEASGSSRDSLISQSHTSHNLHPQKPH
LPASHGPQMHGHPRDNYSHPNKRHFSNADRGDWQRERKFNYGGGNNAPWGSDRHHQYEQH
WYKDHHYGDRRHMDAHRSGSYRPNNMSRKRPYEQYSSDRDHRGHRDYYDRHHHDSKRRRS
DDFRPQNYHQQDFRRMSDHRPTMGYHGQGPSDHYRSFHTDKLGEYKQPLPSLHTAVSDPR
SPPSQKSPHDSKSPLDHRSPLERSLEQKNNPDYNWNVRKT
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggctcataaaccaggtgaagagcatttgagcttgtccccgtgcatttttacttggtat
caaacattttctcagttgacatttgaggaagaaaaactcagtcattcggcctctgaagaa
gcttcgggttcagactctggcagtcagtcggaaagtgaacagggcagcgatcctggaagt
ggacatggcagcgagtccaatagcagttctgaatcttctgagagtcagtcagaatctgag
agtgaatcagcaggttccaaatcacagccagtccttccagaagccaaagagaagcctgcc
tctaagaaggaacggatagctgatgtgaagaagatgtgggaagaatatcctgatgtttat
ggggttaggcggtcaaaccgaagcagacaagaaccatcacgatttaacattaaggaagag
gcaagtagcgggtctgagagcgggagtccaaaaagaagaggccagaggcagctgaaaaaa
caagaaaaatggaaacaggacccctcagaagatgaacatgagcaaggcaccagtgcagag
agtgacccagaacaaaagagagtaacagctaggagacctgtccccagaagaacagtgccc
aaacctccagttaaaaaacaacctaagactcagcgtggaaagcggaaaaagcaggagtct
tctgatgacgatgacgatgacgatgaagctcccaaaaggcagactcgacgaagagctgct
aaaaatgtgagttacaaagaagatgatgactttgagactgattcagatgatctcattgaa
atgactggagaaggaattgatgaacagcaagataatagtgaaactattgaaaaggtctta
gattcaagactgggaaagaaaggagccactggagcatccaccactgtgtatgctgttgaa
gccaatggagacccgagtggcgactttgacacggagagggaggaaggggaaatccaatac
cttatcaaatggaagggctggtcttacatccacagcacatgggagagtgaagaatcctta
caacaacagaaagtgaagggcctgaaaaaactggagaacttcaagaagaaagaggatgag
atcaaacaatggttagggaaagtttctccagaagatgttgaatatttcaattgccaacag
gagctggcatcagagttgaataaacagtatcagatagtagaaagagtaatagctgtgaag
acaggtaaatctgcattgggccaaacagattttccagctcatagtcggaagccagcgcct
tcaaatgagcctgaatatctatgcaaatggatgggactgccctattcagagtgtagctgg
gaagatgaagccttgatcggaaagaaattccagaattgtatcgacagcttccatagtcgt
aacaactccaaaaccattccaacaagagaatgcaaggcactaaagcaaagaccacgattt
gtagctttaaagaagcagccagcatacttaggaggggagaatctggagctccgagattat
cagctagagggtctcaactggcttgctcactcctggtgcaaaagcaacagtgtaatcctt
gctgatgaaatgggcctaggaaagaccatccagaccatatcatttctctcctacctgttc
caccagcaccagctctatggaccctttcttatagtcgtccccttatccaccctcacttca
tggcagagggagtttgaaatctgggcaccagagattaatgtagtggtttatataggtgac
ctgatgagcagaaatacgataagggaatatgagtggattcattctcaaaccaaaaggttg
aagttcaatgcacttataacaacatatgagatcctcttaaaagataagaccgtgctgggc
agtattaactgggccttcctgggagtagatgaagcccatcggttgaagaatgatgactct
ttattgtataaaactctgattgatttcaagtccagccataggctactgatcacgggcacc
cctcttcagaattccctcaaggaactttggtctttgctgcactttattatgccggagaag
tttgagttctgggaagattttgaagaagaccatggaaaggggagagagaatggttatcag
agtcttcataaggtactagagcctttccttcttcggagagtcaaaaaagatgtggagaaa
tcccttcctgccaaagtggaacagattctcagggtggagatgtcagcccttcagaaacag
tattataaatggatcctgaccaggaattacaaggctctcgccaaaggaacaaggggcagc
acatctggctttcttaatattgtgatggagctgaaaaaatgctgcaatcactgctacctg
atcaaagctccagaggaaaatgaaagggagaacggccaggaggtccttcagtctctaatc
aggagcagtgggaagctgattctcttagacaaattgttgacaagactccgagaaagggga
aacagagtcctgatcttctctcagatggtgaggatgttggatattctggccgagtacctg
actatcaaacactatcctttccagcgcctggatggttctatcaagggagaaatccgaaaa
caggcattggatcacttcaatgcagatggttctgaggacttctgcttcctgctctccaca
cgggctgggggcctaggaatcaatctggcttcagcggacacagttgtcatctttgactcc
gactggaatccccagaacgacttgcaggcacaagcccgagcgcatagaatcggtcagaag
aagcaggtgaatatttaccgcttggttacaaaggggactgtggaagaggagatcatagaa
cgggccaaaaagaagatggtgttggaccatctggtgattcagcgcatggacaccactggc
aggacagtcctcgaaaacaactcaggaagatccaactctaatccttttaataaagaagag
ctgaccgccatcttgaaatttggagcagaggatctcttcaaagaaattgaaggagaggag
tcagagcctcaggagatggacatagatgaaatcttgcgcttggctgaaaccagagagaat
gaagtgtcgactagtgcaacagatgagcttctgtcgcagtttaaggttgccaactttgca
acgatggaagatgaagaggagctagaggaacgtcctcacaaggactgggatgaaatcatt
ccagaggagcaaaggaagaaagtggaggaggaggaacggcagaaggagctagaagaaatc
tatatgctgccgcgaattcgtagttccactaaaaaggctcagacaaatgacagcgattct
gacacggagtcgaagaggcaagcccagagatcgtccgcttctgagagtgagacagacgac
tccgacgatgataagaagccgaagcgcagagggcgcccccgaagtgtgcgcaaagacctg
gtggagggcttcacggacgcagagatccgaaggttcatcaaggcttataagaagtttggt
ctccctcttgaaaggctagagtgcatagcacgtgatgccgagctagtggataagtctgta
gcagacctgaaacgcctgggggaactgattcataatagctgtgtgtcagcaatgcaggaa
tatgaagaacagctgaaagaaaatgccagcgaaggaaaaggaccaggcaagagaaggggc
ccaaccatcaagatctctggggttcaggttaatgtgaagtccattatccaacatgaagaa
gagtttgagatgctgcataaatcgatccctgtggaccctgaggaaaaaaaaaaatactgc
ttgagctgccgagtcaaagcggcgcatttcgatgtggagtggggtgtggaggatgattct
cgtctgttgcttgggatctatgaacatggctatggaaactgggagctaattaagacagac
ccagagctaaaactcactgataaaattctaccagtggagacagataaaaagcctcagggg
aagcagctgcagacccgggtggactacttgctgaagctgctcaggaagggtctggagaag
aagggcactgtgaccagtggggaggagaccaaactaaagaaacggaagcctcgagtaaag
aaggaaaataaagcccccaggctgaaggacgagcatgggcttgaactgtcatccccaaga
cactcagacaaccagtctgaggagggggaagtgaaggatgatggcttagaaaaaagtcca
acgaaaaaaaagcagaagaagaaagagaacaaggagaacaaagagaaaccagtgagttct
cggaaggacagggaaggagacaaagagaggaagaagtccaaggacaagaaagagaaggtt
aaaggtggtgatgccaagtcttcaagtaaatcaaagcgagctcagggtcctgtccacatt
acagcgggaagtgaacctgttcccattggggaggatgaagatgatgatctggaccaggaa
accttcagcatttgtaaagagaggatgaggcctgtgaaaaaggcactgaaacagctggac
aaacctgacaagggactcaatgtgcaagaacagctggagcacaccaggaactgcctgctt
aaaattggagaccgcatagctgagtgccttaaagcttattcagatcaggagcacatcaaa
ttgtggaggaggaacctatggatttttgtttccaagtttacagaatttgatgcacgaaaa
ctacataaattatataagatggctcataagaaaagatctcaagaagaggaggaacaaaag
aagaaagatgatacgcttggtggtaagaaaccatttcgaccagaggcctcgggctcaagc
cgggattctttgatatctcagtcccatacctcacacaaccttcatcctcagaagcctcat
ttgcctgcctcccatggtccacagatgcatggacatccaagagataactacagtcatccc
aacaagagacactttagtaatgcagatcgaggagactggcagagggaaagaaagttcaac
tatggtggtggtaacaatgccccctggggcagtgaccggcaccatcaatatgagcagcac
tggtacaaggatcaccattatggtgaccggagacatatggatgcccaccgttctggaagc
taccgacctaacaacatgtccagaaagagaccttatgagcagtacagcagcgaccgagac
caccggggacacagagactattatgacaggcaccatcatgactctaagcggaggagatca
gatgattttaggccccagaattaccaccagcaggatttccgacgaatgtctgaccaccga
cccacgatgggttaccacggccagggaccctcagaccattaccgctcttttcacacagac
aagttgggggaatacaaacagcccctgccctcactgcacactgcggtctcagatcctcgc
tcacctccttcccagaaatctccccatgattccaagtcacccttggatcacaggtctcct
ttggagaggtcactagaacagaagaacaacccagattataactggaatgttcggaaaaca
taa
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integrated database retrieval system
