Peromyscus leucopus (white-footed mouse): 114709513
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Entry
114709513 CDS
T07241
Symbol
Nphp1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pleu03037
]
114709513 (Nphp1)
Cilium and associated proteins [BR:
pleu03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
114709513 (Nphp1)
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Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
hSH3
Motif
Other DBs
NCBI-GeneID:
114709513
NCBI-ProteinID:
XP_028749222
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Position
4:complement(103804984..103855228)
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AA seq
684 aa
AA seq
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MLARRPRDPLQALRRRGQELKLQVDSLVTESQLTGALEPSKRRDIYQRCIQLKQAVDENK
NALQKLNKADESAPVGNYEKRKEEEYSLLEKLTCQLQELAVGVSKKDTLKDEAHSDKEED
DLTEEDEEETEETGGEEEESGEEKERQEHTSPTQAEVVKYFALGDFDAQQAGDLTFKKGD
ILHIIEKKPDGWWLAKDAEGNEGLIPRTYLEPCTKKDEQESSEEGSKEGSEEDVEVVDET
ADGAQVRQRTDSHWSAVRKALSEQINTVDMLATMGAIPAGFRPSMLSQLLDEAGNQFRAS
YFLQPDLTTSQLAFRDLLWDAKAGTIMSRPSLISLILTLWSCKMIPLPGTSIQVLSRHVR
LCLFDGNKVLSNIHTVRAVWQPKKPKTWTFSPQVTGILPCLLDGDCFIRSNSSTPDLGLL
FELGISYIRNSTGERGELSCGWVFLKLFDASGVPIPAKTYELFLKGGTPYEKGVEVDPSV
SRRAQGSVFRQMISMRRQPQLLVKLRSLNRRSRAMLSLLPETLVGSMCSAHILIFYRQIL
GDVLLRDRANLQSADLISHPMLATFPMLLEQPDVMDALRSSWAEKESTLKRSEKRDKELL
KAEFLLVYHDCVLPLLHSTLLPPFRWAEEETEAARWKAIADFLKQSRENEGSLKALLSPD
GVHEPFDLSEQTYDFLGEIRKNSA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcccggcggccgcgggacccgctgcaggcgctgaggcgccgcgggcaggagctg
aagctgcaggttgatagtctggttactgaaagccaactgacaggtgctctggaaccgagt
aaaaggagagatatttaccaaagatgtatccagttaaaacaggcagtagatgaaaataaa
aatgctcttcaaaaattaaacaaggctgatgaatctgcacctgtcgggaactatgagaag
agaaaggaggaggagtacagtcttctggagaagctgacctgccagctgcaggagcttgct
gtgggcgtcagcaagaaggacacactcaaagacgaggcacacagtgacaaagaggaagat
gatttgactgaagaagatgaagaagaaactgaagaaactggtggagaggaagaagaatca
ggagaggagaaagaaaggcaggaacacacttccccgacacaagcagaagtcgtcaagtac
tttgctctcggggacttcgatgctcagcaggctggggacctgacgttcaagaaaggggac
attctccatataatcgaaaaaaagcctgatggttggtggctggctaaggatgctgaagga
aatgagggtctcattcccaggacctacttggagccctgcactaagaaagacgagcaagag
tcaagtgaagaaggcagcaaggagggcagtgaggaggacgtggaggtggtggatgaaact
gcggatggagcccaagtgaggcagagaacggattcccactggagtgctgttcgaaaagct
ctctcagagcagataaacactgttgatatgttagccacaatgggagctattcctgcgggg
ttccggccttccatgctctcccagctgctggatgaagcagggaaccagtttcgagcaagc
tacttcttacagccagatctcacgacatcacagctggccttcagagatctactgtgggat
gctaaggcaggcacgattatgtcaaggccaagtcttatttctttgattctgaccctctgg
agctgtaaaatgatccctctcccaggaacaagcatacaggttctcagcagacatgtgcgc
ctctgtctgtttgatggtaataaggttctgagcaacatccatacggtccgagcggtctgg
cagcctaaaaagcccaaaacgtggaccttttctccccaggtcactggcatcttaccatgc
ttgctcgatggtgactgtttcatcaggtccaattcctcaactccagaccttgggttatta
tttgaacttggaatttcttacattcgaaattctactggtgagagaggagagttaagctgt
ggctgggtatttcttaagctttttgatgccagcggagttcctattccagcaaaaacgtat
gaactcttcttgaaaggcggcactccttacgaaaaaggcgttgaagtggacccttcagtg
tccagaagagcacagggcagtgttttccgtcagatgataagcatgcggaggcagcctcaa
ctgctggtgaagctgcggtctctgaacaggaggtccagggccatgctcagcctgctgcca
gaaaccttggtgggaagtatgtgctccgctcatatactgatattttaccgacaaattctt
ggagatgtactcctgagagacagggcgaacctgcaaagtgctgatttaattagtcatccc
atgctggccaccttccctatgctcctggaacagcccgacgtgatggatgctctcaggagt
tcgtgggccgagaaagaaagtacactaaaacgatcagaaaagagagacaaagagctcctg
aaggccgagttcctcctggtctaccatgactgtgtgctccctcttctgcactcgacgctg
ctgcccccgttcaggtgggctgaggaagagacggaggctgctcggtggaaagccatcgcc
gacttcctcaagcagagcagagagaacgaggggtccctgaaggctctgctgtcaccagat
ggggttcatgagccatttgacctttcagagcagacctacgacttcttgggagaaataaga
aagaactcagcctga
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