KEGG   Peromyscus leucopus (white-footed mouse): 114709812
Entry
114709812         CDS       T07241                                 
Symbol
Rae1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu03013  Nucleocytoplasmic transport
pleu05014  Amyotrophic lateral sclerosis
pleu05164  Influenza A
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114709812 (Rae1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    114709812 (Rae1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    114709812 (Rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pleu03019]
    114709812 (Rae1)
   03036 Chromosome and associated proteins [BR:pleu03036]
    114709812 (Rae1)
Messenger RNA biogenesis [BR:pleu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     114709812 (Rae1)
Chromosome and associated proteins [BR:pleu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    114709812 (Rae1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WD40 WDR55 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_ACSF4 NBCH_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_WDR41 ExoI_SH3 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 114709812
NCBI-ProteinID: XP_028749615
LinkDB
Position
4:140644687..140659977
AA seq 368 aa
MSLFGSASGFGTGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgtttgggtcagcctctggatttgggactggtgggaccagcatgtttgggagc
acaaccacagataatcacaacccaatgaaggatatcgaagtaacatcttctcctgatgat
agcatcggttgtctgtctttcagcccaccaaccttaccagggaatttccttattgcggga
tcatgggctaatgatgttcgctgctgggaagtacaagacagtgggcagaccattccgaaa
gcccagcagatgcacactgggccagtgctcgacgtctgctggagtgatgatgggagcaaa
gtattcacagcatcgtgtgataaaacagccaagatgtgggacctgaacagcaaccaggcc
attcagatagcacagcatgatgctcctgttaagactatacattggatcaaagccccgaac
tacagctgtgtgatgacggggagctgggataagactctgaagttttgggatacccggtcg
tcaaatcctatgatggtcttgcaactccctgagcgctgttactgtgcagatgtgatatac
ccaatggccgtggtggccactgcagagagaggcctgattgtctaccagttagagaatcag
ccttctgagttcaggaggatagagtctccactgaaacaccagcatcgatgtgtggctatt
tttaaagacaaacagaacaagccgacaggttttgctctgggaagtattgagggcagagtt
gccattcactacatcaaccctccaaacccggccaaagataacttcaccttcaaatgccat
cgatccaatggcaccaacacttcagctcctcaagacatctatgcagtgaacggaattgcc
ttccatcctgtccacggcacccttgccactgtggggtctgatggtaggttcagcttctgg
gacaaagacgccaggacaaaactgaagacttcagaacagttagaccagcccatagcggct
tgctgcttcaatcacaacggaaacatatttgcctatgcttccagctacgactggtccaag
ggacatgagttttataatccccaaaagaaaaattacattttcctgcgtaacgcagctgaa
gagctaaagccaaggaataagaagtag

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