Peromyscus leucopus (white-footed mouse): 114710121
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Entry
114710121 CDS
T07241
Symbol
Smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X3
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03082
ATP-dependent chromatin remodeling
pleu04714
Thermogenesis
pleu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114710121 (Smarca2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
114710121 (Smarca2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
114710121 (Smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114710121 (Smarca2)
03036 Chromosome and associated proteins [BR:
pleu03036
]
114710121 (Smarca2)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114710121 (Smarca2)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
114710121 (Smarca2)
Chromatin remodeling factors
BAF complex
114710121 (Smarca2)
PBAF complex
114710121 (Smarca2)
GBAF(ncBAF) complex
114710121 (Smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
114710121
NCBI-ProteinID:
XP_028750042
LinkDB
All DBs
Position
1:20362655..20534128
Genome browser
AA seq
1594 aa
AA seq
DB search
MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMSTM
GSADFPQEGMHQMHKPMDVIHDKGIVDDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPLSGGGPTPPQMPPSQPGPLIPGDLQAMNQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQPQQQQQQP
QQPQQQAQAQPQQQQPALVSYNRPSGPGQELLLSGQSTPQKLSAPAASGRPSPAPPAAAQ
PTATAVPGPSVQQSAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAH
RIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYK
RSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKL
SKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEY
VANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVK
VTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQET
EEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQS
ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPY
LIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKD
KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLN
FLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVES
QLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKIC
NHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMT
SLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQ
AADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQ
KVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRM
DMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDY
SDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKL
SPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKEL
PEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQ
SVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKK
RPNRGKAKPVVSDFDSDEEQDENEQSEASGTDDE
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacccacagacccagctgcaatgccccatcctgggccctcaccagggcctgga
ccctcgcctggaccaattctggggcctagtccaggaccaggaccatccccaggttccgtt
cacagcatgatgggacccagtcctggaccccccagtgtctcccatcctatgtcaacaatg
ggctctgcagacttcccccaggaaggcatgcatcagatgcacaagcccatggacgtgata
catgacaaggggattgtagacgacgtccactgtggatccatgaagggcaccagcatgcgc
ccaccacacccgggaatgggccctccccagagcccgatggatcagcacagccaaggttat
atgtcaccacatccctctcctttgggagccccagagcacgtctccagccctttatctgga
ggaggcccaactccaccccagatgccaccgagccagccagggccactcatcccaggagat
ctgcaggccatgaaccagcctaacagaggtccctcacctttcagtcctgtccagttgcat
cagcttcgagctcagattttagcttacaaaatgttggccaggggccagcccctccctgaa
acgctgcagcttgcagtccagggaaaaaggaccttgcctggcatgcagcagcagcagcag
cagcagcaacaacagcagcagcaacagcaacagcagcctcagcaacaacagcagcagccc
cagcagcctcagcagcaggcgcaggcgcagccacagcagcagcagccagcccttgttagc
tacaacagaccatctggccctgggcaggagctgctgctgagtggccagagcacgccacag
aagctgtcagccccggcagccagcggccgaccctcgcctgcacccccagccgctgcccag
cccacggccacagctgtacccgggccctcggtgcagcagtcggctccagggcagccatct
ccggtcctgcagctgcaacagaagcagagccgtatcagccccatccagaaaccgcaaggc
ctcgaccctgtggagatcctgcaggagcgagagtacagacttcaggctcgcatagctcat
aggatacaagaactggaaagtctgcctggctcgttgccaccagatttacgaaccaaagcc
actgtggaactgaaggcgcttcggctactcaatttccaacggcagctgagacaggaggtg
gtggcctgcatgcggagggataccaccttggagacggccctcaattccaaagcttacaag
cggagcaagcgccagaccctgcgagaggcgcgcatgacggagaaactggagaagcagcag
aagatagagcaggagaggaagcgtcggcagaagcaccaggaatacctgaacagtattttg
caacatgcaaaagattttaaggaatatcatcggtctgtggctgggaagatccagaagctg
tccaaagcagtggccacttggcatgctaacaccgaaagggagcaaaagaaggagacggag
cggattgagaaggagaggatgcggaggctgatggctgaagacgaagagggctacaggaag
ctcattgaccaaaagaaagacagacgcttggcttaccttctgcagcagactgatgagtat
gtggccaatctgaccaacctggtttgggagcacaagcaggcccaggcagccaaagagaag
aagaagaggaggaggaggaagaagaaggctgaagagaatgcagagggaggggagtctgcc
ctgggaccagatggagagccgatagatgaaagcagccagatgagtgacctgcctgtcaaa
gtgacacacacagaaactggcaaggtcctctttggaccagaagcacccaaagcaagtcag
ctggatgcctggctggagatgaatcctggctatgaagttgcacccagatccgatagtgaa
gagagtgactctgactacgaggaagaggatgaagaggaggagtccagcaggcaggaaacg
gaagagaagatactgctggatccaaacagcgaagaagtttccgaaaaggatgccaagcag
atcattgagactgcgaaacaggatgtggacgacgaatacagcatgcagtacagcgccagg
gggtcacagtcctactacacggtggctcacgccatctctgagagggtagagaagcagtct
gccctcctcattaacggcaccctgaagcattaccagctccagggcctggaatggatggtg
tcgctgtataataacaatctgaatggaatcttggctgatgaaatggggctaggcaagacc
atccagaccattgcactcatcacctacctgatggagcacaaaagactcaatggtccctat
ctcatcattgttcccctctcgactctgtctaactggacatatgaatttgacaaatgggct
ccttctgtggtgaaaatttcttacaagggtacccctgccatgcgacgctcccttgtcccc
cagctacggagtggcaaattcaacgtcctcctgactacttatgagtacattataaaagac
aagcacattcttgcaaagattcggtggaaatacatgattgtggatgaaggccaccgcatg
aagaaccaccactgcaagctgacccaggtcctcaatacacactacgttgcccccagaagg
atccttttgacggggaccccgctacagaataagcttcctgaactctgggccctcctcaac
ttcctcctccctacaatcttcaagagttgcagcacattcgaacagtggttcaacgctccg
tttgccatgactggcgaaagggtggacttgaatgaagaagaaactatcttgatcatcagg
cgtctacacaaggtgttgagaccctttttactgaggagactgaagaaagaggttgaatct
cagcttccagaaaaggttgagtatgtcatcaagtgtgacatgtcagctctgcagaagatt
ttgtatcgtcacatgcaggccaaggggatcctcctcacagacggttctgagaaagataag
aaggggaaaggaggtgccaagacacttatgaacactatcatgcagctgagaaaaatatgc
aaccacccatatatgttccagcacattgaggagtcgtttgctgaacacctgggctattca
aatggggtcatcaatggggctgagctgtatcgggcctcgggaaagtttgagctacttgat
cgtattctgcccaaattgagagcgactaaccaccgcgtgctgcttttctgccagatgacg
tctctcatgaccatcatggaggattactttgcttttcggaacttcctttacctgcgcctt
gatggcaccaccaagtctgaggatcgcgctgctttgctgaaaaaattcaatgaacccggg
tcccagtatttcattttcttgctgagcacacgagctgggggcctgggcttaaatcttcag
gccgcggacacggtggtcatctttgacagcgactggaatcctcatcaggatctgcaggcc
caagaccgagctcaccgcatcggccaacaaaatgaggtccgggtgctgagactctgcact
gtcaacagtgtcgaggagaagattctcgcagctgccaaatacaagctgaatgtggatcag
aaggttatccaggccggcatgtttgatcagaagtcatccagccatgagcggagagcattc
cttcaggccatattggagcatgaagaggagaatgaggaagaagatgaagtacccgatgac
gagaccctgaaccaaatgattgctcgccgggaagaagagtttgatctttttatgcgcatg
gacatggaccggaggagggaggatgccagaaatccaaagcgtaagcctcgcctgatggag
gaagatgagctgccttcctggattattaaggatgacgctgaagtggagaggctcacctgt
gaagaagaggaggagaagatatttggtagaggttctcgccagcgccgggatgtggactac
agcgacgccctcaccgagaagcagtggctccgggccatcgaagacggcaatttggaagaa
atggaagaggaagtacggcttaagaagagaaaaagacgaagaaatgtggataaagatcct
gtgaaggaagatgtggaaaaagcgaagaaaagaagaggccgccctccagctgagaaactg
tcaccaaaccccccaaaactaacgaagcagatgaacgccatcattgatactgtgataaac
tacaaagacaggtgtaacgtggagaaggtgccctgtaattctcagttggaaatagaagga
aacagttcagggcgacagctcagtgaagtcttcattcagttaccttccaggaaagagtta
ccagaatactatgaattaattaggaagccagtggatttcaaaaagataaaggaaagaatt
cgaaaccataagtaccggagcctgggtgacctggaaaaagatgtcatgcttctctgtcac
aatgcacagacattcaacttggagggatcccagatctatgaagactccattgtcctacag
tcagtatttaagagtgctcggcagaaaatcgccaaagaagaagagagcgaggaagaaagc
aatgaggaggaggaggaagatgatgaagaggagtctgagtcagaggcaaagtctgtgaag
gtgaaaatcaagctcaataaaaaagaagagaaaggccgggacacggggaaaggcaagaaa
aggcccaatcgaggcaaagccaaacctgtggtgagcgactttgacagcgacgaggagcag
gacgagaacgaacagtcagaagcaagtgggactgatgatgagtga
DBGET
integrated database retrieval system
