Peromyscus leucopus (white-footed mouse): 114710134
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Entry
114710134 CDS
T07241
Symbol
Ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleu03000
]
114710134 (Ssrp1)
03036 Chromosome and associated proteins [BR:
pleu03036
]
114710134 (Ssrp1)
Transcription factors [BR:
pleu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
114710134 (Ssrp1)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
114710134 (Ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
bPH_2
Motif
Other DBs
NCBI-GeneID:
114710134
NCBI-ProteinID:
XP_028750051
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Position
4:61340641..61351428
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AA seq
712 aa
AA seq
DB search
MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEKKEGMNPSYDDYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEE
TDESFNPGEEEDDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRRKSSE
VKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWD
RKAEDARRDYEKAMKEYEGGRGESSKRDKSKKKKKVKAKMEKKSTPSRGSSSKSSSRQLS
ESFKSKEFVSSDESSSGENKSKKKRRRSEDSEEEELASTPPSSEDSASGSDE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacactggagttcaacgacatcttccaggaggtgaaagggtccatgaatgat
gggaggctacgattgagccgccagggtatcatctttaagaacagcaagaccggcaaagtg
gacaatatccaggccggggagttgacagaaggcatctggcgccgggtagcgttgggccac
ggacttaaactgctcacaaagaatggccatgtctacaagtatgatggcttccgagaatcg
gagtttgagaaactctctgatttcttcaaaactcactatcgccttgagctaatggagaag
gatctgtgtgtgaagggctggaactggggaacagtgaagtttggtggacagctgctttct
tttgacattggtgatcagccagtctttgagatacccctaagcaatgtgtcccagtgtaca
acaggcaagaatgaggtgaccctggaattccaccagaatgatgatgccgaagtgtctctc
atggaggtgcgcttttatgtccctcccacccaggaagatggtgtggaccctgtagaggcc
tttgcccagaacgttctttcaaaggcagatgtgatccaggccactggagatgccatctgc
atcttccgggagctgcagtgtttgactcctcgtggtcgctacgacatccggatctaccct
acctttctacacctacacggcaagacctttgactacaagatcccctatactacagttctc
cgtctcttcctgctgccccacaaagatcaaagacagatgttctttgtgatcagcctggat
ccccccatcaagcagggccaaacccgttaccacttcctgatcctcctcttctccaaggat
gaggacatctccttgaccctcaacatgaatgaggaagaagtggagaagcgatttgagggg
cggcttaccaagaacatgtcaggatctctctatgagatggtcagccgggtcatgaaagca
cttgtaaaccgtaaaatcacagtcccaggcaatttccaagggcactcaggggcccagtgt
atcacctgctcctacaaggccagctcaggactcctgtaccccctggagcggggcttcatc
tacgtgcacaagccccctgtgcacatccgctttgacgagatctctttcgtcaactttgcc
cgcggcaccacaacgactcgttccttcgactttgaaatcgagaccaagcagggcactcag
tacaccttcagcagcattgagagggaggagtatggaaagctgttcgattttgtcaatgca
aaaaagctcaacatcaaaaacagaggactgaaagagaaaaaggagggcatgaacccaagc
tatgatgattatgctgactctgatgaagaccagcatgatgcctatttggagaggatgaag
gaggagggcaagatccgggaggagaatgccaatgacagcagtgatgactcaggagaagaa
actgatgagtccttcaaccccggtgaagaggaagacgatgtggcagaggagtttgacagc
aacgcctctgccagctcctccagcaatgagggtgacagtgaccgggaagagaagaagcgc
aaacagctcaaaagggccaagatggccaaggatcgcaagagccggaggaagtcctcagag
gtgaagaagggcaaagatccaaatgcccctaagaggcctatgtctgcatacatgttgtgg
cttaatgccagccgagagaagatcaagtcagaccaccctggcatcagcatcacagatctt
tctaagaaggcaggcgagatctggaaggggatgtccaaagagaagaaggaggaatgggac
cgcaaggctgaggacgccaggagggactatgaaaaggccatgaaagaatatgaaggagga
agaggggagtcttctaagagggacaagtctaagaagaaaaagaaagtaaaagcaaagatg
gaaaaaaaatccaccccctccaggggctcatcatccaagtcttcatcaaggcagctaagt
gagagcttcaaaagcaaagaatttgtgtccagtgatgagagttcttcaggagagaacaag
agcaaaaagaaaaggaggcggagcgaggactccgaagaagaggaactagccagtactcct
ccaagctcagaggactctgcctcgggatctgatgagtag
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