KEGG   Peromyscus leucopus (white-footed mouse): 114710318
Entry
114710318         CDS       T07241                                 
Symbol
Polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu03020  RNA polymerase
pleu03420  Nucleotide excision repair
pleu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114710318 (Polr2j)
  09124 Replication and repair
   03420 Nucleotide excision repair
    114710318 (Polr2j)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    114710318 (Polr2j)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pleu03021]
    114710318 (Polr2j)
   03400 DNA repair and recombination proteins [BR:pleu03400]
    114710318 (Polr2j)
Transcription machinery [BR:pleu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     114710318 (Polr2j)
DNA repair and recombination proteins [BR:pleu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114710318 (Polr2j)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 114710318
NCBI-ProteinID: XP_028750263
LinkDB
Position
23:27557799..27563661
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgctcctccggccttcgagtcgttcttgctcttcgagggcgagaagaaaatcacc
attaacaaggacacgaaggtgcccaatgcttgcttgttcaccatcaacaaagaagaccac
actctggggaacatcattaaatcccagctgctgaaggacccacaggtgctgtttgccggc
tacaaagtccctcaccccctggagcacaagatcatcatccgcgtgcagaccaccccggac
tacagtccccaggaggccttcaccaacgccatcacagacctcatcagtgagctctccctt
ctggaggaacgcttccgggtggccatcaaggacaagcaggaaggaatcgagtaa

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