Peromyscus leucopus (white-footed mouse): 114710397
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Entry
114710397 CDS
T07241
Symbol
Dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114710397 (Dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114710397 (Dhx36)
03012 Translation factors [BR:
pleu03012
]
114710397 (Dhx36)
Enzymes [BR:
pleu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114710397 (Dhx36)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114710397 (Dhx36)
Translation factors [BR:
pleu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114710397 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
AAA_22
HA2_N
AAA_19
PhoH
nSTAND3
ATPase
NPHP3_N
DUF6782
AAA_23
Motif
Other DBs
NCBI-GeneID:
114710397
NCBI-ProteinID:
XP_028750362
LinkDB
All DBs
Position
6:complement(41303792..41348950)
Genome browser
AA seq
1000 aa
AA seq
DB search
MSYDYHQSWGRDAGPRGSGQGSGGGGGGSRGPGGGGGGRGGRGRHPGHLKGREIGLWYAK
KQTQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKDSEAQISWFAPEDHGYGTEV
SKEKKINSEKKLDNQEKKSLNQEKKTFRITDKSYIDRDSEYLLQENEPNIGLDQQLLEDL
QKKKMDPRYIEMQSFRKKLPSYGMQKELVNLINNHQVTVVSGETGCGKTTQVTQFILDDY
IERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSIL
YCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRSDLKVILMSAT
LNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKERRSQFKRGFMQGHVN
RQEKEEKEAIYKERWPVYIKELRTRYSASTVDVLERMDDDKVDLNLIAALIRYIVLEEED
GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIV
IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP
GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVL
LSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK
DPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSP
NTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRL
NLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPY
CLLFFGGDISIQKDNGQEVIAVDEWIVFQSPERIAHLVKGLRKELDILLQEKIECPHPVD
WNDTKSRDCAVLSAILDLIKTQEKAVPRNLPPRSQEGYYS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgactaccatcagagctggggccgcgacgcggggccgcgaggctccggccag
ggctctggcggcggcggtggagggagccggggcccgggcggcggcggaggaggccgcggt
ggccggggacggcatcccggacacctcaagggtcgcgagatcggcctctggtacgccaag
aagcagacgcagaagaacaaggaggccgagaggcaggagagagctgtagtacacatggat
gaacggcgagaagagcaaattgtgcagctgctgaattctgtccaagctaagaatgataaa
gattcagaagcacagatatcctggtttgctcctgaggatcatgggtatggtactgaagtg
tctaaggagaaaaaaattaactcagagaagaaattggacaaccaggaaaagaaatcgctg
aaccaagaaaaaaagacatttaggatcacagacaaatcatacattgaccgagattctgag
tacttattgcaagaaaatgaaccaaatataggcttagaccagcaattattggaagattta
caaaagaaaaaaatggaccctcggtatatagagatgcagagtttcagaaaaaagctgcct
tcatatggaatgcaaaaggagctggtgaatttaatcaataaccatcaggtaacagtagta
agtggtgaaaccggctgtggcaaaaccactcaggtcacgcagttcatcttggatgactac
attgagagaggaaaaggctctgcctgcagaatcgtgtgtacgcaaccaagaagaattagt
gctatttcagttgctgagagagtagccgccgaaagggccgagtcttgtggcaatggtaat
agcactggataccagattcgtctccagagtcggttgccaaggaaacagggttctatctta
tattgcacaacaggaatcattcttcagtggctccagtcagactcgcgtttgtccagtgtt
agccatattgtgcttgatgaaattcatgaaaggaatctacagtcagatgttttaatgact
gttattaaagatcttctcaattttcgatctgacctgaaagtaatactgatgagtgcaacg
ttgaatgctgagaaattttcagaatattttggtaactgtccaatgatacatatacctggt
tttacttttccagttgtggaatatcttttggaagatatcattgaaaaaataagatatgtt
ccagaacaaaaagaacgtagatcccagttcaagaggggtttcatgcagggtcatgtaaat
agacaagaaaaagaagaaaaagaggcaatctataaagaacgctggccagtttatataaag
gagctgcggacaagatactctgcaagtaccgtagatgttttggaaaggatggatgatgat
aaagttgatctgaatttgattgctgcccttattcgatacattgttttggaagaagaggat
ggtgcaatactggtttttctaccaggctgggacaatatcagcactttacatgatctcttg
atgtcacaagtgatgtttaaatcagataagtttcttattatacctttacattcactgatg
cctacagtaaaccagacacaggtatttaaaaaaactcctcccggcgttcggaaaatagta
attgctaccaacattgcagagactagcatcaccatagatgatgtggtttatgtaatagat
ggaggaaaaattaaagagacacactttgacacacagaacaacatcagtaccatgtctgct
gagtgggtcagtaaagctaatgccaaacagaggaaaggaagagcaggaagagttcagcct
ggtcattgttatcatctgtataatggccttagagcaagtcttctagatgactaccaacta
ccagagattttgagaactcctttagaagaactttgtttgcaaataaagattttaaggcta
ggtggaattgcttattttctgagtagattaatggatccaccatcaaatgaggcagtattg
ctctccataaagcacctaatggaactgagtgctttggataaacaagaagaattgacacct
cttggcgtccatttagcccgattacctgttgagccacatattggaaaaatgattcttttt
ggagctttattctgttgcttggatccagtgctcactatcgctgccagtctcagctttaaa
gacccctttgtcattccactgggaaaagaaaagattgcagatgcaagaagaaaggaattg
gcaaaggaaactagaagtgatcacctgacagttgtgaatgcatttgagggttgggaagaa
gctaagcgacgtggtttcagatatgaaaaagactactgctgggaatattttctgtctcca
aacacactgcagatgctgcataacatgaagggacagtttgctgagcatcttcttggagct
ggatttgtaagcagcagaagtcccaaagatcctaaagctaatataaattcagataatgag
aagataattaaagctgtcatctgtgctggtttatatcccaaagttgctaaaatccgacta
aatttgggtaaaaaaagaaaaatggtaaaagttcacacaaagtctgatggtctggtttct
attcatcctaagtctgtcaatgtggagcaaacagacttccactataactggcttatctat
cacttgaagatgaggacaagcagtatttacttgtacgactgtacagaagtttcaccatac
tgcctgttgttctttgggggagatatttccatccagaaagataatggtcaggaagttatt
gctgtagatgaatggattgtgtttcagtctccagaaagaattgcccatcttgttaagggg
ctaagaaaggaactggatatccttctgcaagagaagattgaatgccctcatcctgtagac
tggaatgatactaagtccagagactgtgcagtactgtcagctattctagacttgatcaaa
acacaggaaaaggctgttccaaggaacttgccaccacggtcacaggagggatattacagc
tga
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