Peromyscus leucopus (white-footed mouse): 114710417
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Entry
114710417 CDS
T07241
Symbol
Taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleu03021
]
114710417 (Taf1a)
Transcription machinery [BR:
pleu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
114710417 (Taf1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
OGFr_N
COG4_N
Motif
Other DBs
NCBI-GeneID:
114710417
NCBI-ProteinID:
XP_028750383
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Position
15:complement(15178679..15215269)
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AA seq
453 aa
AA seq
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MSDFGEELTKLAVAENGKRETSVFSNPGMHFPWLQNRVETVVTGGKRKRDFTQTTSACLS
FIHEALLKHQWQRAAEYMHSYLQTLEDSDPYKRQAAPEIIWKLGSEILFYHPRSNVETFN
SFADRMKNIGVMNYLKISLQHALYLLHHGMLEDANRNLSDAETWRYGEKSSSQEVLINLV
QAYKGLLQYYTWSKKKMELSELDEDDYAYTAKTQNMLSQSCKTSASISALLKTPGVWDPF
VKSYVEMLEFYGDQDGAREILTNYAYDEKFPSNPNAHIYLYEFLKREKAPRAKLISVLKI
LREIVPSHPLMLEFHMLLRKSETEEHRKLGLAVLFEVLDFAGCTKNITAWKYLAQYLKQT
LMESHPAWVEEEWKSRRSWWPAFHFSFFWAKSDWKADTGLACEKAFVAGILLGKDCRYFR
YILKQGHETLKKKIKRMKKSVKKYSIVNPDVCT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttcggggaagaattgacaaagcttgctgtggcagagaatggcaagagagaa
acttctgtgttctctaatccaggaatgcacttcccgtggcttcagaatcgtgtagaaact
gtagtgactggagggaagaggaagagggattttactcagacgacaagcgcgtgtttaagc
tttatccacgaagccctgctgaagcaccagtggcagcgggctgcggagtatatgcacagt
tacctacagaccctggaggattccgacccctacaagaggcaggctgcccctgagatcatt
tggaagcttggaagtgaaattctattttatcaccccagaagcaatgtggagacttttaat
agctttgccgaccggatgaaaaatattggtgtcatgaattatttaaagatctccttacaa
catgcattgtatcttttacatcacggaatgcttgaggatgcaaatagaaatctcagcgat
gcagagacatggagatatggggaaaagtcgtcctctcaggaagtgttgatcaaccttgtt
caggcctacaaagggcttttacagtactacacttggtccaaaaagaagatggagctgtca
gagcttgatgaagatgattatgcttataccgcaaaaacccaaaacatgctcagccagagc
tgcaagacgtctgcaagtatcagtgcactgcttaaaactcctggggtttgggatcctttt
gtgaagagttatgtggagatgctagaattctacggtgatcaagatggagcccgagagata
ctcaccaattatgcatatgatgaaaagttcccctcaaaccccaatgcccacatctactta
tatgaatttctcaagagagagaaggcaccaagagcgaaactgataagtgttcttaagatt
ttacgtgagattgtgccatctcatccactaatgttagaattccatatgttgcttaggaaa
tcagagacagaagaacaccggaagctgggcttggctgtgctgtttgaagttctggatttt
gctggatgcactaagaacataactgcctggaaatacctagcacagtatctgaagcagaca
ctaatggaaagccatccggcgtgggtggaagaagagtggaaatctaggagaagctggtgg
ccggcctttcacttcagcttcttttgggcaaagagcgactggaaggcagacaccggcttg
gcttgtgagaaagcgtttgtagcgggaatccttttaggaaaagattgtagatattttcgg
tatattttaaaacaaggtcatgaaaccttgaagaagaaaataaagcggatgaagaagtct
gtgaaaaaatatagtattgtaaatccagatgtttgcacctag
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