Peromyscus leucopus (white-footed mouse): 114710590
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Entry
114710590 CDS
T07241
Symbol
Zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114710590 (Zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleu03019
]
114710590 (Zcchc7)
03016 Transfer RNA biogenesis [BR:
pleu03016
]
114710590 (Zcchc7)
Messenger RNA biogenesis [BR:
pleu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
114710590 (Zcchc7)
Transfer RNA biogenesis [BR:
pleu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
114710590 (Zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
114710590
NCBI-ProteinID:
XP_028750598
LinkDB
All DBs
Position
2:55697736..55893038
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AA seq
541 aa
AA seq
DB search
MFGGYETVEAYEDDLYREDSSSELSVDSEVEFQLYSQVHYAQNVHNANKEEGYEEKNCEN
SETAGVQPNQKNLIVLSDSEVIQLSDTSEVITLSDEDSIYRCKGKNTKVQAQEKRSQTPA
SPHSNKLAKKRKRDNEKPESEERSSVIREVMIIEVSSNEEEESTISENENVESWMLLGCE
EDDKDHDILLNLVGCENPGAEGEDDVNWFISDKDIEAKIGNNRSSGRWTNRYYSVNKNVT
CRNCDKRGHLSKNCPLPQKVRPCCLCSERGHLQYGCPARFCLDCSLPMSSTHRCLERSSW
RKRCDRCDMIGHYADACPEIWRQYHLTTKPGPPKKPKTPSGQSALVYCYNCAQKGHYGHE
CTERRMFNQTFPTSPFIYYYDDKYEIQQRDRRIKRKVKEIQKNGDFPRQFKRPHMEESDK
RGHHDMRKSHSSRKSSRWPRENKETRKEMTRHREGEKRRWAHQRGDVDEDFPRGSKAHSS
GSGANPKPSRSRHHSSHYYRLREERLLRESKRSKPKKRKHTEEDSNDNLFLIKQRKKKMK
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtggctatgagactgtagaagcatatgaagatgatctgtatcgtgaagattcg
tctagtgaactgagtgttgatagtgaggtggaatttcagctctacagccaagttcattat
gcccagaatgtccataatgccaacaaggaagaagggtatgaggaaaagaactgtgagaat
tctgaaacagccggtgttcaaccaaaccagaagaacttaatcgttctttcagatagtgaa
gtcatccagctgtcagatacgtcagaggtcatcacattatctgatgaagatagtatttat
agatgtaaaggaaaaaatactaaagtccaagcacaggaaaagaggagccaaactcctgct
tctcctcattctaataaattggctaagaaacgcaagagggataatgagaagcctgaatct
gaagagagatcaagtgtgatccgagaggtcatgatcatagaggtcagttcaaacgaggag
gaagaaagtaccatttcagagaatgaaaatgtggaaagctggatgctactgggatgtgag
gaagatgataaagatcatgacatccttctcaaccttgtgggatgtgaaaaccctggtgct
gaaggagaagatgatgtgaactggttcatcagtgacaaagacatcgaggccaagataggc
aataacagatcatctggaagatggaccaaccgatactattcagtcaacaaaaatgtcaca
tgtagaaattgtgataaacgtggccatttgtcaaaaaactgccccttaccacaaaaagtc
cggccttgttgcctctgctcggagagaggacacctccagtatggctgtccagcccgtttc
tgcttagactgctctttgcccatgtcttccacacacagatgtcttgaaagatcttcctgg
agaaaacgatgtgatcgatgtgatatgataggccactatgctgacgcttgcccagaaatc
tggaggcagtatcacctaacgaccaaacctggaccacctaaaaaaccaaagaccccttct
ggacaatcagcattagtgtattgctacaactgtgcacagaaaggccattatggacatgaa
tgtacagaaagacgaatgtttaaccagacgtttccaacatctcccttcatctactactat
gatgacaaatacgagatccagcagagagatcggagaataaagcggaaagtgaaagaaatc
cagaaaaatggagattttccaaggcagttcaaaagaccacacatggaagagtcagataag
aggggccaccatgatatgagaaaaagccattcctcgaggaaaagcagcaggtggcctcga
gaaaataaagaaacccgcaaggaaatgaccaggcatagagaaggtgagaagcgcaggtgg
gctcaccagcgtggtgatgtggatgaagacttccctaggggctcgaaagctcactcctcg
ggcagtggtgcaaacccaaagccgtccaggtcccgtcaccattcatcccactactacagg
ctgagagaagagcggcttctcagagagagcaagcgcagcaagccgaagaagaggaaacac
acggaagaagacagcaatgataatttatttctcattaagcaaaggaagaaaaaaatgaag
ctgtga
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