Peromyscus leucopus (white-footed mouse): 114710930
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Entry
114710930 CDS
T07241
Symbol
Tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pleu02000
]
114710930 (Tmc1)
03037 Cilium and associated proteins [BR:
pleu03037
]
114710930 (Tmc1)
Transporters [BR:
pleu02000
]
Other transporters
Pores ion channels [TC:
1
]
114710930 (Tmc1)
Cilium and associated proteins [BR:
pleu03037
]
Other cilia and associated proteins
Stereociliary proteins
114710930 (Tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Ac76
Toddler
Motif
Other DBs
NCBI-GeneID:
114710930
NCBI-ProteinID:
XP_028751083
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All DBs
Position
1:complement(14563904..14684880)
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AA seq
762 aa
AA seq
DB search
MAVHVFLSSTVQIQVEEKEEDTEESSSEEEDKLPRRESLRPKRKRTRDVIREDDPEPEPE
DEETRKAREKERRRRLRRGAEEEEEIDEEELERLKAQLDENRQMIATVKCKPWKMEKKIE
VLKEAKKFVSENEGALGKGKGKKWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAIE
SQFGSSVASYFLFLRWMYGVNMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAA
NFGVLYDFNGLAQYSVLFYGYYDNKRTIGWLNFRLPLSYFLVGIMCIGYSFLVVLKAMTK
NIGDDGGGDDNTFNFSWKVFCSWDYLIGNPETADNKFNSITMNFKEAIIEERAAQVEENI
HLIRFLRFLANFFVFLTLGASGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGM
FCPTLFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKHVKAN
ITLWEANMIKAYNESLSGNTTGPPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVT
ILIGDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLP
GINILRLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSL
PPSFDCGPFSGKNRMFEVIGETLEHDFPSWMAKILRQLSNPGLVIAVILVMVLTIYYLNA
TAKGQKAANLDLKKKMKMQALENKMRNKKMAAARAAAAAGGQ
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcatgtcttcctctcttcaacagtgcagatccaagtggaggagaaagaagag
gacaccgaggaaagctcaagtgaagaagaagataaactaccaagaagagagagcttgaga
ccaaagaggaaacggaccagagatgttatcagggaggacgacccagaacctgagccagag
gatgaagagacaaggaaagcaagagaaaaagaaaggcggaggaggctgaggagaggagcg
gaagaagaagaagaaattgatgaagaggaattagaacgattgaaggcacagttagatgag
aatagacaaatgattgctactgtcaaatgcaaaccttggaaaatggagaagaaaattgaa
gttctcaaggaagccaagaaatttgtgagtgaaaatgaaggggctctcgggaaaggaaaa
ggaaagaagtggtttgcatttaagatgatgatggccaagaaatgggcaaaattcctccga
gactttgagaactttaaagctgcttgtgtcccgtgggaaaacaaaatcaaggcaattgaa
agtcagtttggctcatcagtggcctcatacttcttgttcctgaggtggatgtatggcgtc
aacatggttctctttatcctgacattcagcctcatcatgttaccagagtacctctggggt
ttaccatatggcagcttacctaggaaaacagtcccaagagctgaagaggcatctgcagcc
aactttggtgtgttgtacgacttcaacggcctggcacagtactctgtcctcttttatggc
tactacgataataaacgcacgattggatggctgaatttccggctacctctctcgtacttc
ctggtggggattatgtgcattggatacagctttctggttgtcctcaaagcgatgaccaag
aatattggtgatgatggaggtggcgatgacaacacgttcaacttcagctggaaggtattc
tgcagctgggactatctgattggtaaccctgaaacagccgacaacaaatttaattcgatc
acaatgaacttcaaggaagccatcatcgaagaaagagcagcccaggtggaggagaatatc
cacctcatcagattcctgaggtttcttgctaacttcttcgtgttcctaacacttggtgca
agtggatacctcatcttttgggctgtgaagcgatcccaagaatttgcacagcaagatcct
gacacccttgggtggtgggaaaaaaatgaaatgaacatggttatgtccctcctggggatg
ttctgtcccacactgttcgacttatttgctgaactggaagattaccatcctctcattgct
ctgaagtggctcctggggcgcatttttgctcttcttctaggcaacttgtatgtgtttatt
cttgcattgatggatgagattaacaacaagattgaagaggagaagcatgtaaaggccaat
attaccctgtgggaagccaacatgattaaggcttacaatgaatccctctctgggaacacc
acaggaccacccttttttgttcatcctgcagatgtacctcgaggaccctgctgggaaacg
atggtgggacaggagtttgtgcgcctcaccgtttctgatgttctgaccacttatgttacg
atcctcatcggtgacttcctcagagcgtgcttcgtgaggttttgcaattactgctggtgc
tgggatttggaatatggatacccttcatacacagaatttgacatcagtggcaatgtcctc
gctctgatcttcaaccaaggcatgatctggatgggctccttctttgcccctagccttcca
ggtatcaacatcctccgactccacacatccatgtatttccagtgctgggctgtgatgtgc
tgcaatgtcccagaggccagagtctttaaagcttccagatcaaacaacttctaccttggc
atgctgctgctcatcctcttcctgtccaccatgcccgtcctgtacatgatcgtctccctc
ccaccatcttttgattgtgggcccttcagtggcaaaaacaggatgttcgaagtcatcggt
gagaccctggaacatgacttcccgagctggatggcgaagatcctgaggcagctttctaac
cccggcctggtcattgctgtcattctggtgatggttttgaccatctattatctcaatgct
accgccaagggccagaaagcagcaaatctggatctaaaaaagaagatgaaaatgcaagct
ttggagaacaaaatgcgaaacaagaaaatggcagctgctcgagcagctgcagctgctggt
ggccaataa
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