Peromyscus leucopus (white-footed mouse): 119088959
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Entry
119088959 CDS
T07241
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Pathway
pleu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119088959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pleu04121
]
119088959
Enzymes [BR:
pleu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119088959
Ubiquitin system [BR:
pleu04121
]
Ubiquitin ligases (E3)
HECT type E3
119088959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WWE
Arm
HEAT_2
UNC45-central
HEAT_Maestro
Npa1
Motif
Other DBs
NCBI-GeneID:
119088959
NCBI-ProteinID:
XP_037066369
LinkDB
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Position
13:complement(1797689..1834828)
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AA seq
918 aa
AA seq
DB search
MSKDDNSSRNTKACTVRRGSGLGKRXAAEARRQEKMADPESNQETVNSSAARTDEAPQGA
AASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSG
ASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN
FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS
KAFYRRFFFSKLTSDNEGQKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLV
VTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLV
PRSPQELYELTSLICELMPCLPXEGIFAVDNHVEEGNAQNTDGAIWQWRDDRGLWHPYNR
IDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSG
YSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFAD
AELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQV
KHLAESESLLTSPPKACTNGSGSLGSTTPASSGTATAATNASADLGSPSLQHSRDDSLDL
SPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTW
GRLSAQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENM
DGSNPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLY
LTSKSEKDAVSREIRLKRFLHVFFSSPLPGEEPIGRVEPVGHAPLLALVHKMNNCLSQME
QFPVKVHDFPSGNGAGGR
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagatgacaacagctccaggaacacaaaagcttgtactgttcggcgaggctct
ggcctgggcaagagangagcagctgaggcccggcggcaagagaaaatggcagaccctgaa
agcaaccaggagacagtaaattcctcagctgcccggacagatgaagctccccaaggagcc
gcagcctctagttctgttgcaggggctgttggcatgaccacctctggggagagtgaatcg
gatgattctgagatgggacgattacaagccctgttagaggccaggggtcttcctcctcac
ctgtttggtcctcttggtcctcggatgtcacagcttttccatagaacaattggaagcgga
gctagttccaaggcccaacagcttcttcaaggactacaagcgagtgatgagagtcaacag
cttcaggcagtcattgaaatgtgtcagctattggttatgggaaacgaagagactctagga
gggtttcctgtgaagagtgttgttccagctttgataacattactgcagatggaacataat
tttgacattatgaatcatgcttgccgagccttaacctatatgatggaagcactccctcgg
tcatctgctgttgtcgtagatgctatccctgtcttcttagaaaagctgcaagttattcag
tgtattgatgtggcagagcaggccttaactgccttggagatgttgtcacggcgacacagt
aaagcattttacaggcggtttttcttttcaaagctcacatctgataatgaaggacaaaag
tcagtagaaagcacttgcctttgttttgcacgtctagtggacaactttcaacacgaggag
aatttactgcagcaggttgcttccaaagatctgcttacaaatgttcaacaactgttggta
gtgactccaccaattttaagttctgggatgtttataatggtggttcgcatgttttctctg
atgtgttccaactgcccaacattagctgttcaacttatgaaacaaaacattgcagaaacg
cttcacttcctcctgtgtggtgcctctaatggaagttgtcaagagcagattgatcttgtg
ccacgaagtcctcaagaactgtatgaactgacatctctgatttgtgaacttatgccatgt
ttaccanaagaaggcatttttgcagttgataaccatgttgaagaaggaaatgcccagaac
acagatggtgcaatttggcagtggcgggatgaccgaggtctctggcatccctataacagg
attgacagccggatcattgaggcagcccatcaggtcggtgaggatgagataagcttgtcc
actctgggacgagtttatactattgattttaattctatgcagcaaatcaatgaggacacg
ggaacagcacgtgccattcagagaaaacctaaccccttagccaatactaacactagtgga
tattcagagttaaagaaggatgatgctcgagcacagctaatgaaagaagacccggaactg
gctaagtctttcattaagaccttatttggtgttctctatgaagtgtatagctcctcagca
ggacctgcagtcagacataagtgccttagagcaattcttaggataatttattttgctgat
gctgaacttctgaaggatgttctgaaaaatcatgctgtttcaagtcacattgcttccatg
ctatcaagccaagacctgaagatagtagttggagcacttcaaatggcagaaatcttaatg
caaaagttacctgatatttttagtgtttacttcagaagagaaggtgtcatgcaccaagta
aaacatttagcagaatctgagtctttgttgacaagtccaccaaaggcgtgcacaaatggg
tcaggatccctggggtctacaacaccagctagcagtgggacagccacggctgcaaccaat
gcttctgctgatctggggtcacccagtttgcagcatagcagagatgattctctggacctg
agccctcaaggtcgattgagtgacgttctcaagagaaaacgactgccaaaacgagggcca
aggaggcctaagtactcacctccaagagatgatgacaaagtagacaatcaagctaaaagc
cctaccactactcagtcacctaaatcttccttcctggcaagcttgaatccaaaaacatgg
ggaaggttaagcgcacagtccaacagcaacaacatcgagccagcacgaactgcgggagtt
agtggtcttgccagggcagcctcaaaagacaccatatccaataacagagaaaaaattaaa
ggttggattaaggagcaggcacataaatttgttgagcgttattttagttctgagaatatg
gatggaagcaaccctgccttgaatgtacttcagagactttgtgctgcaactgaacaactc
aacctccaggtggacggtggagctgagtgccttgtagaaatccgtagcatagtctctgag
tcagatgtttcatcatttgaaattcaacatagtggatttgtgaaacagctgttgctgtat
ttgacatctaaaagtgaaaaggatgctgtcagcagagagatccgattaaagcgattccta
catgtctttttttcttctccacttcctggagaagagcccattggaagagtagaaccagtg
ggccatgcgcctttattggcactagttcacaagatgaacaactgtctcagccaaatggaa
caatttccagtcaaagtgcacgatttccctagtggaaatggggctggcggcaggtaa
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