Panthera leo (lion): 122199175
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Entry
122199175 CDS
T10741
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
plez Panthera leo (lion)
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plez03009
]
122199175 (IGHMBP2)
03012 Translation factors [BR:
plez03012
]
122199175 (IGHMBP2)
Enzymes [BR:
plez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122199175 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
122199175 (IGHMBP2)
Ribosome biogenesis [BR:
plez03009
]
Eukaryotic type
Other ribosome biogenesis factors
122199175 (IGHMBP2)
Translation factors [BR:
plez03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122199175 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
DEAD
ResIII
nSTAND3
AAA_16
AAA_22
SLFN-g3_helicase
UvrD-helicase
IstB_IS21
Flavi_DEAD
AAA_25
AAA
PhoH
ABC_tran
AAA_18
DnaB_C
UvrD_C_2
Zot
NPHP3_N
NTPase_1
Spore_III_AA
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
122199175
NCBI-ProteinID:
XP_042759886
LinkDB
All DBs
Position
D1:110962542..110989123
Genome browser
AA seq
1116 aa
AA seq
DB search
MASAAVESFVSKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLY
GRLLVTFEPRRCASATALPSNSFTSGDIVGLYDEGGQLATGILTRIMQRSVTVAFDESHD
FQLSLDRERAYRLLKLANDVTYKRLKKALITLKKYHSGPATSLIEVVFGGSPPSPASETQ
PPPFCNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRRGLKVLCCAP
SNVAVDNLAERLARCQQKVLRLGHPARLLDCIQQHSLDAVLARSDSAQIVADIRKDIDQA
FLKNRQTQDKREKSSFWNEIKLLRKELKEREEAAMLESLRSAAVVLATNTGASPDGPLKL
LPDGHFDVVVIDECAQALEASCWIPLLKAGKCILAGDHKQLPPTIVSPKAAAAGLARSLM
ERLAAERGAGVVRTLTVQYRMHRAIMQWASEALYHGRLTAHPSVAGHLLRDLPGVAATEE
TGIPLLLVDTAGCGLFELEEEDDQSKGNPGEVRLVSLHVQALVEAGVRASDIAVITPYNL
QVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTR
ARRHVAVVCDSRTVNSHAFLKTLLDHFTEHGEVRTAFEYLDDIVPENYSHESSQGHGQAG
ARPRDPAAAAGKPPGSRPREGVQEARAAAGLQRKTPGGKPSGPEVGSQPSLDGGGLCPEA
ADGGDRADRFRAEIAEFVASENTRLEFPASLNSHDRMWIHQIAEEHGLRHDSTGEGKKRF
ITVSKRAPPAPPPPAGGPTAPGPTEAEPPPGEQSGRDPPDLKALHLERLQREKSRREPQA
EQGQRASRSGPRKLPEKKKKKEAKGTFQDLCAPGQEAYGPLALGPVTTPWFTWPSRVRQH
PLGFVCAVDGVRRVLVFKRALSGRGCAFQRRSPWAATPSGESARCSHLLAVTVTSSLRKG
RPGLDGHRAGRRVIACSLSPKAGSWAERLRGGEGHVAIDLPGEEDFDALVSAAVKADNTC
GLAKCTASVATLGQLCLHCGRRFCLSHHLPEIHGCGERARAHARQRISREGVLYAGSGTK
DRSLDPAKRAQLQRRLDKKLDELTSQRKSKRKEKEK
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcggctgtggagagcttcgtgagcaagcagttggacctgctggagctcgag
agagacgcggaggtcgaggagcgcaggtcctggcaggaaaacatctctctgaaagagctc
cagagccgaggggtctgtttgctgaagctgcaggtgtccagccagcggaccgggctgtac
gggcggctgctggtcaccttcgagcccaggagatgtgcgtctgccacggcccttcccagc
aacagctttacttccggagatatagtgggtctgtatgacgaaggcggtcagctggccacg
gggatcctgacccggatcatgcagagatcggtcacagtagcctttgatgagtcccatgat
ttccagctgagcttagaccgagagcgtgcctacagactgttaaaactcgccaatgacgtc
acttataagcggctgaaaaaagctctcattaccctaaagaagtatcattctggccccgcg
acctccctcatagaggtcgtcttcggtggatcaccccccagtcctgccagtgaaacacag
ccgccgccgttctgtaacacctccctggacgcctcccagaaggaagccgtctcctttgcg
ctgtcccagaaggaacttgccatcatccacgggcctcccggcactgggaagaccaccact
gtggtcgaaatcatccttcaggctgtgagacggggcttaaaggtgctgtgctgtgccccc
tctaacgtcgccgtggataacctggcagagcggctggcgcggtgtcagcagaaggtcctg
cgcctcgggcaccccgcccggctgctggactgcattcagcagcactccctcgacgccgtg
ttggcacgcagcgacagcgcccagatcgtcgcagacatcagaaaggacatcgatcaggcc
ttcttgaagaacaggcagacccaggataagagagagaagagtagtttctggaacgaaatc
aagctgttacggaaagagctgaaggagagggaggaggccgccatgctggagagcctcagg
tcggcagccgtggtgctggcaacgaacacaggcgcttctcccgacggccctctgaagctg
ctgcccgacggccacttcgacgtggtggtcatcgacgagtgcgcccaggccctcgaagcc
agctgctggatccccctgctgaaggccgggaagtgcatcctggccggagatcacaaacag
ctgccgcccaccatcgtgtcccccaaggctgcggcggcgggcctggcgcgcagcctgatg
gagcgcctggcggcggagcggggcgcgggcgtggtgcggacgctgacggtgcagtaccgc
atgcaccgggccatcatgcagtgggcctccgaggccctgtaccacgggcggctcaccgcc
cacccttccgtggcgggccacctcctgcgggacctccccggggtggccgccacggaggag
acgggcatccccctgctgctcgtggacacggccggctgcgggctctttgaactcgaagag
gaggacgaccagtctaaggggaaccctggcgaggtgcgtctcgtcagcctgcacgtccag
gccttggtggaggctggcgtccgagcgagcgacattgccgtcatcacaccgtacaacctc
caggtggacctgctcaggcagagcctcgctcacaggcaccccgagcttgaaattaagtcg
gtcgatggcttccaaggccgagagaaggaggctgtggtcctgtccttcgtcagatccaat
aggaaaggcgaagtgggcttcctcgccgaggaccggcggatcaacgtggccgtcacccgc
gctcggcgccacgtggcggtcgtgtgtgattcgcgcaccgttaacagccacgcctttctg
aagaccctgctggatcacttcacggagcacggcgaggtgcgcacggcctttgagtatctc
gatgacatcgtccctgaaaactactcccacgagagttcccagggccacggccaagctggt
gcgaggccccgggacccggccgcggctgccgggaagcctcctggaagccggccgcgggag
ggggtccaggaggcccgggcggccgccgggctgcagcggaagacgcctggcgggaagccc
tcgggccctgaggtcgggtctcagcccagcctcgacggaggcggcctctgcccggaggcc
gcggacggcggagaccgcgcggaccgcttcagggccgagatagcggagtttgtggcgagt
gagaacacgcggctggagtttcccgcgtccctgaactcacacgacaggatgtggatccac
cagatagcggaggagcacgggctgaggcacgacagcaccggcgaagggaagaagaggttc
ataaccgtgagcaagagggccccgcctgccccgccgcctccagcgggcggccccacggcc
cccggccccacggaggcggagccccctcccggggagcagagcggccgggaccccccggat
ctgaaggctctgcacctggaaaggctgcagagggagaagagccggcgggagccgcaggcc
gagcaggggcagcgggcctcgcgctcagggccgcgcaagttaccggagaagaaaaagaaa
aaagaagcaaaaggaactttccaggacttgtgcgcacctggtcaggaagcttacggcccc
ctggcgctggggcccgtgactacgccgtggttcacctggccgtcccgggtacggcagcat
ccgttgggtttcgtttgtgcagtcgatggcgtgaggcgcgttcttgtctttaaacgtgcg
ctcagcggaagaggatgtgctttccagaggcgctctccgtgggccgccactccttccggg
gagtccgcacggtgctcgcacctcctggcggtgacggttactagctcgctgaggaagggc
cgccccgggctggacggacaccgggccggacggagggtcattgcctgttcactgagcccg
aaggcaggaagctgggcagagcggctccgtgggggtgaaggacacgtggccatagacttg
cccggcgaggaggacttcgacgccctggtctcggccgccgtgaaggccgataacacctgc
ggccttgctaagtgcacagccagcgtcgcgaccctgggtcagctctgcctgcactgtggc
cgccgcttctgcctcagccaccacctgccggagatccacggctgtggggagagagctcgt
gcccacgcccggcagaggatcagccgggaaggagtcctctacgccggcagcgggaccaag
gacaggtccctggacccagccaagagggcccagctccagaggaggctggataagaagctg
gatgagctgaccagccagaggaagagtaaacggaaggaaaaggagaagtga
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