Panthera leo (lion): 122202153
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Entry
122202153 CDS
T10741
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
plez Panthera leo (lion)
Pathway
plez04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122202153 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
plez00536
]
122202153 (COL13A1)
Glycosaminoglycan binding proteins [BR:
plez00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122202153 (COL13A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
122202153
NCBI-ProteinID:
XP_042764338
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Position
D2:30281711..30428209
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AA seq
750 aa
AA seq
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MVAERPRKAAAAGARGPGELSAPATVALAVAPAERCARLPSPGSCGLLALALCSLALSLL
AHFRTAELQARVLRLESERGEQQMETAILGRVNQLLDEKWKLHSRRRREAPPKTSAGCHC
PPGPPGPAGRPGLPGDKGAIGIPGRVGAPGDAGMSIIGPRGPPGQPGARGFPGFPGPIGL
DGKPGHPGPKGEMGLMGPRGQPGPQGQKGEKGQCGEYPHREHPSGTFSSLRSSQIITLKL
LPLLNSVRLAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGPPGLPGPMGPPGLP
GPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGITVAGMKGEPGTPGAKGEKGAAG
SPGLLGLLGQKGEKGDAGNSFGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPPGRQGDKGE
PGAAGEQGPAGPKGSKGEPGKEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGI
PGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKAGPTGMKGEDGHVGSPGEKGE
KGETGQAGPPGLDGPTGEKGEPGGQGRPGTTGLPGPIGLPGFTGEKGEPGEKGDPGVEVP
GPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGASGLDGRPGPP
GTPGPVGVPGPAGPKGERGSKGDLGMTGPSGAAGLPGLHGPPGDKGNRGERGKKGSRGPK
GDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggtagccgagcgcccccgcaaagcggcagccgccggtgcccgcggccccggggagcta
agcgcgcccgcgacggtggcgctggcggtggcgccggcggagcgctgcgcgcggctgccg
agcccggggtcgtgcgggctgctggcgctggccctgtgttcgctggcgctcagcctgctc
gcccactttcggaccgcggagctgcaggcccgggtgctgcgcctggaatcggagcgtggg
gagcagcaaatggagacggctattttgggacgagtcaaccaactgctggatgagaaatgg
aagctccactctcggaggcgccgggaggcccccccgaagacgtctgcagggtgtcactgc
ccaccaggacctcctggtcccgctggaagacccggcctcccaggggacaaaggtgccatt
gggattcctggacgtgtgggggccccaggagatgccggcatgtccatcatcggtccccgc
ggcccccctggtcagccgggcgctcgaggttttcctggatttccgggtcccatcgggcta
gatggaaaaccgggccaccccggacccaaaggagagatgggcctgatgggtccccgagga
cagccgggacctcaaggacaaaaaggagaaaagggtcagtgtggagagtacccacatcgg
gagcacccgagcggcactttttcgtctctgcgctccagtcagatcattaccctgaagctg
ctgcctctcctcaattcagtgcgactggctccacccccagtcataaaaaggcggaccttc
cagggtgaacagggccaggccggtatccaaggaccaccggggccaccaggcccccctgga
ccgagcggacctctggggcccccgggactgccagggcccatggggccacccggcttacct
gggcctccaggaccaaagggagacccaggaatccagggctaccacggccgaaagggagaa
cgaggcatgccggggatgccgggcaaacacggagccaagggggctcccggaatcaccgtg
gcggggatgaagggtgagccggggaccccaggagccaagggcgaaaagggggctgcaggc
tcccccgggctgctcggcctcctggggcagaagggagaaaaaggcgacgctggcaactcc
tttggagggggcagaggggagcccggccccccagggctacctgggcccccaggcccaaag
ggagaagctggtgttgatggccaggccggccccccaggacggcaaggagacaagggtgag
cccggagcagccggagaacagggaccggctggccccaagggcagcaagggggaaccaggc
aaagaaatggtggactataatgggaacatcaacgaggctctccaggagatccgaacgctg
gccttgatggggccccctggtcttcccgggcaaatcggcccacccggagccccggggatc
ccaggccagaagggggagattggacttccaggccctccaggacacgatggggaaaaggga
cctcgaggcaaaccaggcgacatgggccctcccggtccccaaggccccccaggaaaggct
gggcccacaggaatgaagggtgaagacggacacgtggggagcccgggagaaaagggggag
aaaggggagacggggcaagcaggcccaccgggtctagacggcccaactggggagaaagga
gaaccaggtggccaagggagacccggaacaacaggattgcctggcccgatcgggctcccg
ggatttacaggggagaaaggagagcccggggagaagggagacccaggagtggaggttcct
gggcccccagggccagaggggcctcccggacctccgggactccaaggtgttcctggacca
aagggggaagcgggactggatggagcaaaaggagagaagggtgtccagggagagaaagga
gaccgagggccgctgggattacccggagcttcaggtttggacggcaggcctgggccaccg
ggtactccaggaccagtcggagttccaggcccagcgggaccaaagggtgagaggggcagc
aaaggagaccttgggatgacaggaccatcaggagcggctgggcttcctggtttacatgga
ccacccggggacaaaggaaaccggggggagagggggaagaaaggctctagagggcctaaa
ggggataagggagaccaaggagcgcctggattagacgccccctgcccgttgggcgaagat
ggcttaccagtccagggctgttggaacaagtga
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