Panthera leo (lion): 122203468
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Entry
122203468 CDS
T10741
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
plez Panthera leo (lion)
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plez03009
]
122203468 (DDX55)
Enzymes [BR:
plez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122203468 (DDX55)
Ribosome biogenesis [BR:
plez03009
]
Eukaryotic type
Pre-60S particles
Helicases
122203468 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
Cas3-like_C_2
SBF_like
AAA_22
Motif
Other DBs
NCBI-GeneID:
122203468
NCBI-ProteinID:
XP_042766265
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Position
D3:complement(6183282..6197272)
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AA seq
600 aa
AA seq
DB search
MEHVTEGSWESLPMRLHPRVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKHQVGALIITPTRELAIQIDEVLAHFTKPFPQFSQILWIGG
RNPGEDVERFKEQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLKNYYMVCKADEKFNQLVHFLRNHKQEKHLIFFSTCACVEYYGKALESLVKGVKIMCIH
GKMKHKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHGGSALVFLLPMEESYVSFLEINQKCPLQEMQLQKNTGDLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECGLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPADVN
TDTIPFKDKIREKQRQKLLEQQRKEKRENEGRKKFIKNKAWSKQKAKKEKKKKINEKRKR
EEGSDIEDEDMEELLNDTRLLRKFKKGKITEEEFEKGLLASGKRTVTTADVGIPAWEPDC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggctcctgggagtcgctgccgatgcggctgcacccgcgggtg
ctgggtgcgctgcgggagctgggcttcccgtacatgacgccggtgcagtctgcaaccatc
cctctgttcatgagaaataaagatgtcgctgcagaggcggtcacgggtagtggcaaaaca
ctcgcttttgtcattcccatcctggagattcttctgagaagggaagagaagttaaaaaag
catcaggtgggagccttaatcatcacaccgacgcgagagctggctattcagatagacgag
gtcctggcgcatttcacgaagcccttcccacagttcagccagattctctggatcggaggc
aggaatcctggagaagatgttgaaaggtttaaggagcaaggtgggaacatcattgtggcc
actccaggccgtttggaggacatgttccggaggaaggcagagggcttggatttggccagc
tgtgtgaggtccctcgacgtcctggtgttggatgaggcagacagacttctggacatgggg
tttgaggcaagcataaataccatcctggagtttttgccaaagcagaggagaacaggcctt
ttctccgccactcagacacaggaggtggagagcctggtgagagcggggctccggaacccc
gtgcggatctcggtgaaggagaagggcgtggcggccagcagcacccagaaaactccttcc
cgcctgaagaactactacatggtatgtaaggcagatgagaaatttaaccagctggtacat
tttcttcgaaaccataagcaggaaaagcacctgattttcttcagcacctgcgcctgtgtg
gaatactatggaaaggccctggaatccctggtgaagggtgtgaagatcatgtgcattcac
gggaagatgaaacataagcgtaacaagatcttcatggagttccgcaaattgcaaagtggg
attttagtgtgcacagatgtcatggcccgaggaatagatattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcagcgcaagtgcctttgtgcatcgctgtggccgcacagcc
cgcatcggccacggtggcagtgcgctcgtgttcctccttcccatggaagagtcatacgtc
agtttccttgaaattaaccaaaaatgccccctgcaggagatgcaactccagaaaaacaca
ggagacctccttccaaagctcaagtccatggccctggctgacagagccgtgtttgaaaag
ggcatgaaagcctttgtgtcctacgtccaggcatatgccaagcacgaatgcggcctcatc
ttcagattaaaggatcttgattttgctagtcttgctcgagggtttgccctgctgaggatg
cccaagatgccagaactgagaggaaagcagtttccagattttgtgcctgcagatgttaat
acagacaccattccattcaaagataaaatcagagagaagcaaaggcagaagctactagag
caacagagaaaagagaaaagagaaaatgaagggagaaaaaaattcataaaaaataaagct
tggtcaaagcagaaggccaaaaaggagaagaagaagaaaataaatgaaaaaaggaagagg
gaagagggttctgatatcgaagacgaggacatggaggaacttcttaatgacacgaggctc
ttgagaaagtttaagaaaggcaagattactgaagaagagtttgagaaggggttgttggcg
agcggcaagagaacagtcaccacagcagacgtggggatccccgcctgggaacctgactgc
tga
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