KEGG   Panthera leo (lion): 122204782
Entry
122204782         CDS       T10741                                 
Symbol
SHOC1
Name
(RefSeq) LOW QUALITY PROTEIN: protein shortage in chiasmata 1 ortholog
  KO
K28108  shortage in chiasmata 1
Organism
plez  Panthera leo (lion)
Brite
KEGG Orthology (KO) [BR:plez00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:plez03036]
    122204782 (SHOC1)
Chromosome and associated proteins [BR:plez03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    122204782 (SHOC1)
SSDB
Motif
Pfam: DUF5587
Other DBs
NCBI-GeneID: 122204782
NCBI-ProteinID: XP_042768398
LinkDB
Position
D4:complement(71783478..71869082)
AA seq 1534 aa
MHFYFGPDTCQEVAQEKENFHKQILKFVRLSEKEDMFPTFKYCAIDYLYENIVRKKFCRD
ALLLRIPSCLYQDGNYYAGVIDNKYRRPWMRASAVSVPGVTDLSVLDQWKASLFVEDFLE
KKTITGMVTQINCEFEEVVPSSNPNSQSEVEETSLYTHEDYTEVFTLVSGLEKYPALQAQ
NEDFSIDEEIIFVNSLMSYKSQLPTLHTLLSRLKLYLINDPILDFKGQIFTEANFFRESF
SFQGDLKNFVKEDFYMDKENFCHEKLEDTPSILLECEFLIPTSLKQEVDIPSLTKLKESL
NLMPEIINYVDENEKLFKRDLTTKHGIGIEDIKCSSTEILAIQSYGEPEYNQPVELEMPL
THLYQTNQHSSMTSLTGLQTFPFSPSEKISLLTAEESATKYRMVWQLESSLKPFLLTVPR
TEEPNSQYSVTDLKKIFSIEEESLVVDPVNPEWWEKEGLNLMETETLEHLNTYLCHDDLS
ADDTKMEIFLPTKVLQFESWLEYKSCSSPIVLINEKSTNDRLLLPQKISSLAKEIPDLCF
SDDYISVKRPTKEEKPKNDLELVYRISQNKENEDYSELNCTVPSIESSSSPKIEKSSFKQ
GRKWKNDLDLLNDFIVLRNKHRTCTSKTELTGSEENDEFQDKEEHSLTLQEESPIVCTNK
AVEKISQERKVDKVIEIQASDSQCQAFCLLEAAATPILKKLVCLCTLPAANWTFATVIFD
ETRFLLKEQEKVISDAIQQGTNDEREMTYKHAALLHLLVTIRDVLLTCSLDTALGYLSNA
KDIYRSILGSYLDNIWRQLEIVQFVREKKPETNYKIQELRCQILNWMQSEQQINVLIIIR
MDSDGEKHLLIKILNKMEGLTLTVLQNKRNDFLESEGVLNGTSSCVVAHNQYIGADFPWS
NFSFVVEYNFVENSCWTKHCEKLNIPHMAFKVILPDTVLKRSTLLDSFGGFVLEIQVPYV
FFASEGLLNTPEILQLLESNYNITLVERSCSESLKLFGSTECYVVVTVDEYTAIVLQDLK
ELNCEKASDNIIMRLMALSFQYSYCWIILYTKKTLNSEYHLTEKALHHLALIYAALVSFV
LKSEELDVKLVLAPGVEEAALIVRQIADHSLMTSKRDPYEWLDKSWLEVSPSKEEMYLLD
FPCINPLVAQLMLNKGPSLHWILLATLCQLQELLPEVPGKVLKHFCSITSLFKISSSSIT
KSPQIPSPRENGNQASTITSSASGSSNSVFQEYNEYQNSDIGATVHKDTNITSNYNSSLT
QLREMPCILSPVTSYNQASYRKDSSCNPNIVHNPFLINIGSRNMAGNSFQNWNDSESDVF
SLDLTQMNCENIISPIDTQKRVAPNFINNQKKGTHVAKGPINKEVCTPNFSLEGSQSPLP
WNFKKNVWEQQNHSFNLEYGEKQTTCDKWYSQKDNLFPNQQKCLSDEVESFLHQSSNAGT
KKTFWRELPSVPSMDLLCASDPNVNQKEFSSLYFHQRAGKCLGQKRHSESSSNSGDKKSL
PDLMCSQLPQFKKRRLVYEKVPGRVDGQTRLRFF
NT seq 4605 nt   +upstreamnt  +downstreamnt
atgcatttctattttggcccagatacctgtcaggaggtagcacaagagaaagaaaatttt
cataaacagatactgaaatttgtacgactttcagagaaagaagatatgtttccaacattc
aaatattgtgcaatagactatttatatgagaatatagttagaaagaagttttgcagagat
gctttgttgcttcgaatcccttcatgtttatatcaagatggaaattattatgcaggagtt
attgataataagtataggaggccatggatgagagcttcagctgtttcagtgccgggagtg
acagatctctcagtcttggatcaatggaaagcaagtctctttgtggaggattttcttgag
aaaaaaacaatcacaggaatggtgacccagattaactgtgaatttgaggaagttgttcca
agttcaaacccaaactcccaaagtgaagtagaggaaaccagtttatacacccatgaggac
tacactgaagtctttacacttgtcagcggtttagaaaaatatccagcacttcaagcacag
aatgaagatttttctattgatgaagaaataatttttgtaaatagcttgatgtcctataaa
agtcagctaccaactttgcatactctgttgagtaggctaaaactatatttgataaatgac
cccattttagatttcaaaggacagatcttcacagaagctaatttcttcagggaatctttc
tcttttcaaggagatttgaaaaattttgtgaaagaagatttttacatggataaagaaaac
ttttgtcacgaaaaactagaagatacaccatcaattttgcttgagtgtgaattcttaata
cctacaagcctcaaacaagaagttgatattccatcactcaccaaactaaaggaatcatta
aacttaatgccagaaataataaattatgtagatgaaaatgaaaagcttttcaaaagagat
cttactaccaagcatggaattggcattgaggatataaaatgcagctccacagagattttg
gccattcaaagctatggtgaaccggagtacaatcaaccagtcgagttagaaatgccacta
actcatctatatcaaacaaaccaacattcttccatgacttcattaacaggacttcagaca
tttccattttcccctagtgaaaaaattagtttgcttactgctgaagaatcggctaccaaa
taccgtatggtgtggcagttagaaagctctttgaaaccatttttgcttacagtaccaaga
actgaagagcccaatagtcaatattcagttacagatttaaaaaagatattttctattgaa
gaagaaagccttgtagttgatcctgtaaacccagagtggtgggaaaaagaaggactaaat
ctaatggagacagaaactttggaacatctgaatacatatttgtgtcatgatgatctatct
gctgatgatactaaaatggagatatttttgcctacaaaagtacttcaatttgagtcatgg
ctagaatataaaagttgttcctcacctattgtacttattaatgagaaatctacaaatgat
cgtttattactcccacaaaagatttcatctctggcaaaagaaataccagacctgtgtttt
tctgatgactatatatctgttaaaagaccaacaaaagaagaaaaaccaaagaatgatcta
gaattagtttatagaataagccaaaataaagaaaatgaagattactcggaacttaactgc
acagtaccatctattgaatcatcttcctctccaaaaattgaaaaatcatcttttaaacaa
ggtagaaaatggaagaatgatttggaccttttgaatgactttattgtactgcgaaataaa
catagaacttgcacctcaaagactgaactcacgggcagtgaagaaaatgatgaatttcaa
gataaagaagaacattccttgactcttcaagaagaaagtcccattgtttgtactaataaa
gccgtagagaaaataagtcaggaaaggaaagtagacaaggtcattgaaattcaagcatca
gatagccagtgccaagcattctgtctcctagaagcagcagctactcctatcttaaaaaaa
cttgtatgcctctgtactctccctgctgctaattggacatttgccactgtcatttttgat
gaaacaagattcctcttaaaggaacaagaaaaagtaataagtgatgctattcagcaaggt
acgaatgatgaaagagaaatgacatacaagcatgctgctctcttacatcttctggtaaca
attagagatgtccttttaacatgcagcttggacacagcattgggatatttgtcaaatgca
aaagatatctacagaagcattttaggctcctatctggacaacatttggagacagctggag
attgtacagtttgttagggaaaaaaagcctgaaaccaattacaagatacaagaactgcga
tgccagatactaaattggatgcagagtgaacagcagattaatgtgctgattataataaga
atggactcagatggtgagaaacatttactcattaaaatccttaacaaaatggaaggttta
acactgactgtcttacaaaacaaaagaaatgattttctggaatctgaaggtgttttaaat
ggtacaagttcctgtgtagttgcacataatcaatacattggagcagatttcccctggagt
aacttctcatttgtggtggaatacaattttgtagaaaactcttgttggactaaacactgc
gagaaattgaatattcctcacatggcctttaaagtgattcttccagacacagtattaaag
agaagcaccttgctggatagttttgggggttttgttttggaaattcaggttccatatgtg
ttttttgcatctgaaggacttcttaatactccagaaattcttcagttgctagaatccaac
tataatatcacactagtggagagaagctgcagtgagtcactgaaactctttggaagtaca
gagtgttatgtagtggtgacagttgatgaatacaccgccatagttttgcaggacctaaaa
gaattgaattgtgagaaggcatcggacaatatcattatgagactgatggcattatcattc
cagtacagctattgttggataattttatataccaaaaaaacattaaactcagagtaccat
cttacagaaaaggcacttcatcatctagcactgatttacgcagctttggtttcatttgtg
ctaaaatcagaagaactggatgtaaagcttgtacttgccccaggagtggaagaggctgca
ctgatagttcgacaaattgctgatcacagtttaatgacctcgaagagagatccttatgaa
tggttggataaatcctggcttgaagtttcaccatctaaggaagaaatgtacttacttgac
tttccatgtattaacccattggtggctcagctcatgttaaataaaggaccatcactgcac
tggatattattagcaactctttgtcaacttcaggaacttttacctgaagttccaggaaaa
gtcttaaagcatttttgtagcatcacttccttattcaagattagttcttcttccataaca
aaatcacctcaaattccatcacctcgggaaaacgggaatcaggctagtaccattaccagt
tcagcttctggctcttcaaactctgtctttcaagaatataatgaataccagaattcagac
ataggagccacagtgcacaaagacacaaacatcacttcaaactataactcttcccttacg
caactcagagaaatgccatgcattttatcacctgtgacttcttataatcaggccagctac
cggaaagactccagttgtaatcctaatatagtacataatcctttcctaattaatatagga
tcaaggaacatggctggtaactcctttcaaaactggaatgattcagagtcagatgttttt
tctttggatctaacacaaatgaactgtgaaaatataatatcaccaattgacactcagaag
agagttgcccctaattttataaataatcagaaaaagggaacacatgttgcaaaaggacct
ataaataaagaagtatgtacccctaacttttcactggaaggctctcaatctcctcttccc
tggaacttcaagaaaaatgtatgggaacaacagaatcactcattcaacttagaatatggt
gaaaagcagactacatgtgacaaatggtactctcagaaagataacttattccctaatcag
cagaaatgtctatcggatgaggtagaaagcttccttcatcaaagttcaaatgctgggact
aaaaagactttctggagagaattaccatctgtccccagtatggatttattgtgtgcttct
gatcctaatgtaaatcaaaaagaattcagcagtctttatttccaccaaagagctgggaaa
tgtttaggacagaaaaggcactctgaatcttcatctaactcaggagacaaaaaatcatta
ccagatctcatgtgttcacaactaccacaattcaaaaaacggcgtctagtgtatgaaaaa
gtccctggtagagttgatggacaaacccgtctgaggtttttttga

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