Panthera leo (lion): 122204782
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Entry
122204782 CDS
T10741
Symbol
SHOC1
Name
(RefSeq) LOW QUALITY PROTEIN: protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
plez Panthera leo (lion)
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plez03036
]
122204782 (SHOC1)
Chromosome and associated proteins [BR:
plez03036
]
Eukaryotic type
Meiosis-specific proteins
Others
122204782 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
122204782
NCBI-ProteinID:
XP_042768398
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All DBs
Position
D4:complement(71783478..71869082)
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AA seq
1534 aa
AA seq
DB search
MHFYFGPDTCQEVAQEKENFHKQILKFVRLSEKEDMFPTFKYCAIDYLYENIVRKKFCRD
ALLLRIPSCLYQDGNYYAGVIDNKYRRPWMRASAVSVPGVTDLSVLDQWKASLFVEDFLE
KKTITGMVTQINCEFEEVVPSSNPNSQSEVEETSLYTHEDYTEVFTLVSGLEKYPALQAQ
NEDFSIDEEIIFVNSLMSYKSQLPTLHTLLSRLKLYLINDPILDFKGQIFTEANFFRESF
SFQGDLKNFVKEDFYMDKENFCHEKLEDTPSILLECEFLIPTSLKQEVDIPSLTKLKESL
NLMPEIINYVDENEKLFKRDLTTKHGIGIEDIKCSSTEILAIQSYGEPEYNQPVELEMPL
THLYQTNQHSSMTSLTGLQTFPFSPSEKISLLTAEESATKYRMVWQLESSLKPFLLTVPR
TEEPNSQYSVTDLKKIFSIEEESLVVDPVNPEWWEKEGLNLMETETLEHLNTYLCHDDLS
ADDTKMEIFLPTKVLQFESWLEYKSCSSPIVLINEKSTNDRLLLPQKISSLAKEIPDLCF
SDDYISVKRPTKEEKPKNDLELVYRISQNKENEDYSELNCTVPSIESSSSPKIEKSSFKQ
GRKWKNDLDLLNDFIVLRNKHRTCTSKTELTGSEENDEFQDKEEHSLTLQEESPIVCTNK
AVEKISQERKVDKVIEIQASDSQCQAFCLLEAAATPILKKLVCLCTLPAANWTFATVIFD
ETRFLLKEQEKVISDAIQQGTNDEREMTYKHAALLHLLVTIRDVLLTCSLDTALGYLSNA
KDIYRSILGSYLDNIWRQLEIVQFVREKKPETNYKIQELRCQILNWMQSEQQINVLIIIR
MDSDGEKHLLIKILNKMEGLTLTVLQNKRNDFLESEGVLNGTSSCVVAHNQYIGADFPWS
NFSFVVEYNFVENSCWTKHCEKLNIPHMAFKVILPDTVLKRSTLLDSFGGFVLEIQVPYV
FFASEGLLNTPEILQLLESNYNITLVERSCSESLKLFGSTECYVVVTVDEYTAIVLQDLK
ELNCEKASDNIIMRLMALSFQYSYCWIILYTKKTLNSEYHLTEKALHHLALIYAALVSFV
LKSEELDVKLVLAPGVEEAALIVRQIADHSLMTSKRDPYEWLDKSWLEVSPSKEEMYLLD
FPCINPLVAQLMLNKGPSLHWILLATLCQLQELLPEVPGKVLKHFCSITSLFKISSSSIT
KSPQIPSPRENGNQASTITSSASGSSNSVFQEYNEYQNSDIGATVHKDTNITSNYNSSLT
QLREMPCILSPVTSYNQASYRKDSSCNPNIVHNPFLINIGSRNMAGNSFQNWNDSESDVF
SLDLTQMNCENIISPIDTQKRVAPNFINNQKKGTHVAKGPINKEVCTPNFSLEGSQSPLP
WNFKKNVWEQQNHSFNLEYGEKQTTCDKWYSQKDNLFPNQQKCLSDEVESFLHQSSNAGT
KKTFWRELPSVPSMDLLCASDPNVNQKEFSSLYFHQRAGKCLGQKRHSESSSNSGDKKSL
PDLMCSQLPQFKKRRLVYEKVPGRVDGQTRLRFF
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgcatttctattttggcccagatacctgtcaggaggtagcacaagagaaagaaaatttt
cataaacagatactgaaatttgtacgactttcagagaaagaagatatgtttccaacattc
aaatattgtgcaatagactatttatatgagaatatagttagaaagaagttttgcagagat
gctttgttgcttcgaatcccttcatgtttatatcaagatggaaattattatgcaggagtt
attgataataagtataggaggccatggatgagagcttcagctgtttcagtgccgggagtg
acagatctctcagtcttggatcaatggaaagcaagtctctttgtggaggattttcttgag
aaaaaaacaatcacaggaatggtgacccagattaactgtgaatttgaggaagttgttcca
agttcaaacccaaactcccaaagtgaagtagaggaaaccagtttatacacccatgaggac
tacactgaagtctttacacttgtcagcggtttagaaaaatatccagcacttcaagcacag
aatgaagatttttctattgatgaagaaataatttttgtaaatagcttgatgtcctataaa
agtcagctaccaactttgcatactctgttgagtaggctaaaactatatttgataaatgac
cccattttagatttcaaaggacagatcttcacagaagctaatttcttcagggaatctttc
tcttttcaaggagatttgaaaaattttgtgaaagaagatttttacatggataaagaaaac
ttttgtcacgaaaaactagaagatacaccatcaattttgcttgagtgtgaattcttaata
cctacaagcctcaaacaagaagttgatattccatcactcaccaaactaaaggaatcatta
aacttaatgccagaaataataaattatgtagatgaaaatgaaaagcttttcaaaagagat
cttactaccaagcatggaattggcattgaggatataaaatgcagctccacagagattttg
gccattcaaagctatggtgaaccggagtacaatcaaccagtcgagttagaaatgccacta
actcatctatatcaaacaaaccaacattcttccatgacttcattaacaggacttcagaca
tttccattttcccctagtgaaaaaattagtttgcttactgctgaagaatcggctaccaaa
taccgtatggtgtggcagttagaaagctctttgaaaccatttttgcttacagtaccaaga
actgaagagcccaatagtcaatattcagttacagatttaaaaaagatattttctattgaa
gaagaaagccttgtagttgatcctgtaaacccagagtggtgggaaaaagaaggactaaat
ctaatggagacagaaactttggaacatctgaatacatatttgtgtcatgatgatctatct
gctgatgatactaaaatggagatatttttgcctacaaaagtacttcaatttgagtcatgg
ctagaatataaaagttgttcctcacctattgtacttattaatgagaaatctacaaatgat
cgtttattactcccacaaaagatttcatctctggcaaaagaaataccagacctgtgtttt
tctgatgactatatatctgttaaaagaccaacaaaagaagaaaaaccaaagaatgatcta
gaattagtttatagaataagccaaaataaagaaaatgaagattactcggaacttaactgc
acagtaccatctattgaatcatcttcctctccaaaaattgaaaaatcatcttttaaacaa
ggtagaaaatggaagaatgatttggaccttttgaatgactttattgtactgcgaaataaa
catagaacttgcacctcaaagactgaactcacgggcagtgaagaaaatgatgaatttcaa
gataaagaagaacattccttgactcttcaagaagaaagtcccattgtttgtactaataaa
gccgtagagaaaataagtcaggaaaggaaagtagacaaggtcattgaaattcaagcatca
gatagccagtgccaagcattctgtctcctagaagcagcagctactcctatcttaaaaaaa
cttgtatgcctctgtactctccctgctgctaattggacatttgccactgtcatttttgat
gaaacaagattcctcttaaaggaacaagaaaaagtaataagtgatgctattcagcaaggt
acgaatgatgaaagagaaatgacatacaagcatgctgctctcttacatcttctggtaaca
attagagatgtccttttaacatgcagcttggacacagcattgggatatttgtcaaatgca
aaagatatctacagaagcattttaggctcctatctggacaacatttggagacagctggag
attgtacagtttgttagggaaaaaaagcctgaaaccaattacaagatacaagaactgcga
tgccagatactaaattggatgcagagtgaacagcagattaatgtgctgattataataaga
atggactcagatggtgagaaacatttactcattaaaatccttaacaaaatggaaggttta
acactgactgtcttacaaaacaaaagaaatgattttctggaatctgaaggtgttttaaat
ggtacaagttcctgtgtagttgcacataatcaatacattggagcagatttcccctggagt
aacttctcatttgtggtggaatacaattttgtagaaaactcttgttggactaaacactgc
gagaaattgaatattcctcacatggcctttaaagtgattcttccagacacagtattaaag
agaagcaccttgctggatagttttgggggttttgttttggaaattcaggttccatatgtg
ttttttgcatctgaaggacttcttaatactccagaaattcttcagttgctagaatccaac
tataatatcacactagtggagagaagctgcagtgagtcactgaaactctttggaagtaca
gagtgttatgtagtggtgacagttgatgaatacaccgccatagttttgcaggacctaaaa
gaattgaattgtgagaaggcatcggacaatatcattatgagactgatggcattatcattc
cagtacagctattgttggataattttatataccaaaaaaacattaaactcagagtaccat
cttacagaaaaggcacttcatcatctagcactgatttacgcagctttggtttcatttgtg
ctaaaatcagaagaactggatgtaaagcttgtacttgccccaggagtggaagaggctgca
ctgatagttcgacaaattgctgatcacagtttaatgacctcgaagagagatccttatgaa
tggttggataaatcctggcttgaagtttcaccatctaaggaagaaatgtacttacttgac
tttccatgtattaacccattggtggctcagctcatgttaaataaaggaccatcactgcac
tggatattattagcaactctttgtcaacttcaggaacttttacctgaagttccaggaaaa
gtcttaaagcatttttgtagcatcacttccttattcaagattagttcttcttccataaca
aaatcacctcaaattccatcacctcgggaaaacgggaatcaggctagtaccattaccagt
tcagcttctggctcttcaaactctgtctttcaagaatataatgaataccagaattcagac
ataggagccacagtgcacaaagacacaaacatcacttcaaactataactcttcccttacg
caactcagagaaatgccatgcattttatcacctgtgacttcttataatcaggccagctac
cggaaagactccagttgtaatcctaatatagtacataatcctttcctaattaatatagga
tcaaggaacatggctggtaactcctttcaaaactggaatgattcagagtcagatgttttt
tctttggatctaacacaaatgaactgtgaaaatataatatcaccaattgacactcagaag
agagttgcccctaattttataaataatcagaaaaagggaacacatgttgcaaaaggacct
ataaataaagaagtatgtacccctaacttttcactggaaggctctcaatctcctcttccc
tggaacttcaagaaaaatgtatgggaacaacagaatcactcattcaacttagaatatggt
gaaaagcagactacatgtgacaaatggtactctcagaaagataacttattccctaatcag
cagaaatgtctatcggatgaggtagaaagcttccttcatcaaagttcaaatgctgggact
aaaaagactttctggagagaattaccatctgtccccagtatggatttattgtgtgcttct
gatcctaatgtaaatcaaaaagaattcagcagtctttatttccaccaaagagctgggaaa
tgtttaggacagaaaaggcactctgaatcttcatctaactcaggagacaaaaaatcatta
ccagatctcatgtgttcacaactaccacaattcaaaaaacggcgtctagtgtatgaaaaa
gtccctggtagagttgatggacaaacccgtctgaggtttttttga
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integrated database retrieval system