Panthera leo (lion): 122208972
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Entry
122208972 CDS
T10741
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
plez Panthera leo (lion)
Pathway
plez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122208972 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plez03019
]
122208972 (EDC4)
Messenger RNA biogenesis [BR:
plez03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122208972 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
122208972 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
DUF445
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
122208972
NCBI-ProteinID:
XP_042776390
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Position
E2:43082933..43094422
Genome browser
AA seq
1409 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSGDGT
STNKSGLRAMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSSQLACLDEAGNLFVWRLALVNGKIQEEILVHIQQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVRVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRSLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHT
AHEDFAFPTAFGESRPELGSEGLGSATQGSQPDLRRIVELPAPADFLSLSSETKPKLMTP
DAFMTPSTSLQQIAASPSNSNSSSSSSSSSSSLTAVSAMSSTSAVDPSLPSLPATRPPEE
LTLSPKLQLDGSLTMSSSSSLQASPRSLLPSLLPGPADKLTPKAPGQVPTAASALSLELQ
EVEPLGLPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFVSSAPEGLEPDSMASA
ASALHLLSPRPRPASELGSQLGLDGGPGDGDRHSTPSLLEAALTQEATAPDNQVWPTAPD
ITRETCSSLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAA
GGFGTKVPTPRLPAKDWKTKGSPRASPKLKRKGKKDDGDSAVGSRLMEHQVAEAPEDWPA
LIWQQQRELAELRHSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQDQRRLERALAEG
QQRGGQLQEQLTQQLSQALSSAIAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVAT
KLTAVEGSMKENISKLLKSKNLTDAIARAAADTLQGPMQSAYREAFQSVVLPAFEKSCQA
MFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATV
SSSVRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGT
PVPAAHLDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCP
LSQPVLLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQF
LQAEPHNSLGKVARRLSLMLHGLVTPSLP
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtgcagagagccagcggccatctaatgcc
tacaatggagatctcaatgggcttctggtcccagaccccctctgctcaggtgatggtact
tcaacaaacaagtctggtctccgggccatgccacctattaatcttcaggaaaagcaggtc
atctgcctctcaggagatgacagctctacgtgcattgggattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcaagcaaggcacggggcagcaacaaggtgaaa
atccagcctgtggccaagtatgactgggagcagaaatactactacggcaacctgattgct
gtgtccaactccttcttggcctatgccattcgggccgccaacaatggctcagcgatggtg
cgggtgatcagtgtaagcacttcggagcggaccctgctcaagggcttcacaggcagcgtg
gctgatctggcctttgcacacctgaattcctcacagctggcctgcctagatgaggcaggc
aacctgtttgtgtggcgcttggctctagttaatggcaaaattcaagaagagatcttggtc
cacatccagcagccagagggtacaccactgaaccacttccgtaggatcatctggtgcccc
ttcatccctgaggagagtgaggactgctgtgaggagggcagcccaacggtggccctgttg
catgaggaccgggctgaggtgtgggacctggacatgctccgctccaaccacagcacctgg
cctgtgcgtgtcagccagatcaagcaaggcttcatcgtggtcaaaggccatagcacgtgt
ctaagtgaaggggccctctcacccgatgggactgtcctggctactgcaagccatgatggc
tttgtcaagttctggcagatctacattgaggggcaggatgaaccaaggtgtctgcacgaa
tggaagcctcatgatgggaggtccctttcctgcctcctgttctgtgacaaccataagaaa
caggaccctgaagtccctttctggaggttccttattactggcgctgaccagaatcgagag
ctaaagatgtggtgcacagtgtcctggacctgtctgcagacaattcgtttctccccagat
atctttagctcagtgagtgtgccccccagcctcaaggtttgtctggacctctcagctgaa
taccttattctcagcgatgtgcaacggaaggtcctctacgtgatggagctgctgcagaac
caggaggagggccgtgcctgcttcagctccatctctgagttcctgctcacccatcctgtg
ctgagcttcggtatccaggttgtgagtcgctgccggctgcggcacactgaagtgctacct
gctgaggaagagaatgacagcctaggggctgatggaacccacggagctggtgctgtggag
tctgcagctggtgtgctcatcaaactcttctgtgtgcatactaaggcattgcaagacgta
cagatccgcttccagccacagctgaaccctgatgtggtggccccactccccacccacact
gcccatgaggacttcgctttccccacagcatttggagagtctcggcccgaactgggctct
gagggcctggggtcagctacccaaggctcccagcctgacctccgacgcatagtggagcta
cctgcacctgctgacttccttagtctgagcagtgagaccaagcccaagctgatgacacct
gacgccttcatgacacctagcacctccctgcagcagattgctgcctcccccagcaacagc
aacagcagcagcagctccagctccagctcctcctctcttacagctgtgtctgccatgagc
agtacctcagctgtggacccctccctgcccagccttcctgccaccaggccacccgaggag
ctgactttgagccccaagttgcagctggatggcagtttgacaatgagcagcagcagcagc
ctgcaggcaagcccgcgtagcctcttgcctagcttgctcccaggtccagctgacaaactg
actcccaaagcacctggacaggtgcctactgctgcttctgcactatcactggagctgcag
gaagtggagcccctggggctaccccaggcttcccctagccgtacccgctcccctgatgtt
atctcctcagcttccactgccctgtcccaggacatccctgagattgcatctgaggccctc
tcccgtggttttgtctcctctgctcctgagggtcttgaaccagatagtatggcctcggct
gcctcagcgctacacctgctgtccccacggccccggccagcatctgagcttggctctcag
cttggcctggatggaggccctggggatggggatcggcatagtaccccttcccttttggag
gcagccttgacccaggaagccacagcccctgacaatcaggtctggcctacggcaccagac
attactcgtgagacctgcagcagcctggcagagagtcccaggaatggcctccaggagaag
cacaagagcctggccttccaccgaccaccttatcacctcctgcagcaacatgatagccag
gatgccagtgctgagcaaagtgaccatgatgatgaagtggccagccttgcctctgctgca
gggggctttggcaccaaagttcccactccacggctgccagccaaggactggaagaccaag
ggatctcctcgagcctcacccaagcttaagagaaagggcaagaaagatgacggggattcg
gccgtaggatcccggctcatggagcaccaggtggcagaagctcctgaagactggccagca
ctaatttggcaacagcagagagagctggcagagctgcggcacagccaggaagaattgctg
cagcgtctttgcacccaacttgaaggcttgcagagcacagtcacgggccacgtagaacgc
gccctagagtcacggcatgagcaagaccagcggcggctggagcgggcactggctgagggg
cagcagcggggtgggcagctgcaggagcagctgacgcaacagctgtcccaggcactgtct
tcagctatagctggtcggctagagcgcagcatacgggatgagatcaagaagactgtgcct
ccatgtgtctccaggagtttggagccagtggcaggccaactgagcaattctgtggccacc
aagctcacagctgtggagggtagcatgaaagagaatatctccaagctactaaagtccaag
aacttgacagatgccattgcccgagcagctgcagacacattacaggggccaatgcagtct
gcctaccgtgaagccttccagagcgtggtactgccagcctttgagaagagctgccaggcc
atgttccagcagatcaatgatagcttccgactgggcacgcaagaatacttgcagcagcta
gagagccacatgaagagccggaaggcacgagaacaggaagcacgggagcccgtgttggcc
cagctgcgaggcctggtcagcacactgcagggtgccactgagcagatggcagccactgta
tccagcagcgttcgggctgaggtgcagcaccagctgcacgtggctgtgggcagcctgcag
gagtcaattttagcacaggtacagcgcatcgttaaaggtgaggtgagtgtagcacttaag
gagcaacaggccgctgtcacgtctagcatcatgcaggccatgcgttcagctgctggcaca
cctgtccccgctgcccacctcgactgccaggcccagcaagcccatattctacagctgctg
cagcagggccacctcaatcaggccttccagcaggccctgacggctgctgacctgaacctg
gtgctgtatgtgtgtgaaactgtggacccagggcaggtttttgggcagccaccctgcccg
ctctcccagcctgtgctcctttccctcatccagcagctggcctctgaccttggtactcga
actgacctcaagctcagctacctggaagaggctgtgatgcacctggaccacagtgacccc
atcactcgggaccacatgggctccgtcatggcccaggtgcgccagaagctctttcagttc
ctgcaggctgagccgcacaactcacttggcaaagtggcccggcgtctcagcctcatgctg
cacggccttgtaacccctagcctcccttag
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integrated database retrieval system
