Panthera leo (lion): 122209046
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Entry
122209046 CDS
T10741
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
plez Panthera leo (lion)
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plez03000
]
122209046 (CTCF)
03036 Chromosome and associated proteins [BR:
plez03036
]
122209046 (CTCF)
Transcription factors [BR:
plez03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122209046 (CTCF)
Chromosome and associated proteins [BR:
plez03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122209046 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
122209046
NCBI-ProteinID:
XP_042776530
UniProt:
A0A8C8XYU2
LinkDB
All DBs
Position
E2:42858026..42906167
Genome browser
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNNSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPVEGEEEEAQPAATDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaagagtctgaaactttcattaaaggaaag
gaaagaaagacttaccagcgacgccgggaaggtggccaggaagaagatacttgccaccta
ccccagaaccagactgatgggggtgaggtggtccaggatgtcaataacagtgtgcagatg
gtaatgatggaacagctggatcctacccttcttcagatgaagactgaagtaatggagggt
acagtcgctccagaagcagaggctgctgtggacgatacccagatcataaccttacaggtt
gtaaatatggaggaacagcccataaacataggagagcttcagcttgtccaagtacctgtt
cctgtgactgtacctgttgctaccacttcagtagaagaacttcagggggcttatgagaat
gaagtgtctaaagagggtcttgcagaaagcgaacccatgatatgtcacaccttacctttg
cctgaagggtttcaagtggtgaaagtaggggccaatggagaggtggagacgctagagcaa
ggggaacttccacctcaagaagatcctagttggcaaaaagacccagattatcagccgcca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggagggcaaagat
gtggatgtgtctgtctacgattttgaggaagagcagcaggagggtctgctatcagaggtt
aatgcagagaaagtggttggtaacatgaagcctccaaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttacacatgtccgcggcgttcaaat
ttggatcgtcacatgaaaagtcacactgatgagagaccacacaagtgccatctctgtggc
agggcattcagaacagtcaccctcctgaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgtgacatggcctttgtgactagtggagaattggtgcggcat
cgtcgttataaacacacccatgagaagccatttaagtgttccatgtgcgattacgccagt
gtagaagtcagcaaattaaaacgtcacattcgctctcatactggagagcgtccattccaa
tgcagcttgtgcagttatgccagcagggacacatacaagctgaagaggcacatgagaacg
cattcaggggaaaaaccttatgaatgttatatttgtcatgctcggtttacccaaagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagcccgaaaaagtgatttgggtgtccacttgcgaaagcagcat
tcctatattgagcaaggcaagaaatgtcgatactgcgatgctgtgtttcatgagcgctat
gccctcatacagcatcagaagtcacacaagaacgagaagcgctttaagtgtgatcagtgt
gattacgcttgcagacaggagaggcacatgatcatgcacaagcgcacccacaccggggag
aagccttatgcctgcagccactgcgacaagaccttccgccagaagcagctccttgacatg
cacttcaaacgttatcatgaccccaactttgtccctgcagcctttgtctgttctaagtgt
gggaaaacatttacacgccggaataccatggcaagacatgctgataattgtgctggtcca
gatggcgtagaaggggaaaatggaggggaaacaaagaagagtaaacgtggaagaaaaaga
aagatgcgttctaaaaaagaagactcctctgacagtgaaaatgctgagccagatctggat
gacaatgaggatgaggaggagcctgctgtggaaattgaacccgagccagagcctcagcct
gtgaccccagccccaccacctgccaagaagcggagaggacgcccccctggcagaaccaac
cagcccaaacagacccagccaacagccatcatccaggtggaagaccagaatacaggtgca
attgagaacattatagttgaagtaaaaaaagagccagacgccgagcccgtggaaggggag
gaggaggaggcccagccagccgccacagacgcccccaacggagacctcacgcctgagatg
atcctcagcatgatggaccggtga
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integrated database retrieval system
