Panthera leo (lion): 122209469
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Entry
122209469 CDS
T10741
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
plez Panthera leo (lion)
Pathway
plez03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122209469 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plez04121
]
122209469 (SLX4)
03400 DNA repair and recombination proteins [BR:
plez03400
]
122209469 (SLX4)
Ubiquitin system [BR:
plez04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
122209469 (SLX4)
DNA repair and recombination proteins [BR:
plez03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122209469 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
YlbE
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
122209469
NCBI-ProteinID:
XP_042777271
LinkDB
All DBs
Position
E3:38205570..38226125
Genome browser
AA seq
1763 aa
AA seq
DB search
MVAVERVHLDKGILESLKVGQMMDESDDEFKELCATFLQRVKKNGTKEVSGERKTQKASN
STETSKPKRTKPTATKSKTLQGPREKKTRSGSQAPRTRRQGAPKWQESKPAPPENGGGGV
PASAVLQENVQNTQTEDARDSDSQPPPSHLTAMGPSPSKPRTAELVLQRMQQFKRADPER
LQHASERCSLESAVEENLPKGPQEEMTAGDGSGPWLPATESDAAVALALQQEFGQEQASL
PDENLEETGLFFCQICQKNLSAMNVTRREQHVNRCLDEAEKALAPTTPRIPECPICGRPF
LTPKSRISHLKQCAVNMDVGPQLLLQAVRLQTVPPEGACGTLASSFSHHAGGLKRRGATN
QKELQRKRRVTKPEAPSEDLLVAMALSRSEMEQEAVPAALSPGNAFSERIRLGAEKKSRK
RKAPISPPPLLVQDPETTGRLTADRVAQLFAEEVELSSTPPLPTSRILKEELGKAGRCLR
PPGGKQNFLWEGSALTGAWALEAFYTASLVPPMVPQRPAKALTQEPMLLPGLPDQPEVGV
QTPPAVPSAHPAGHGPRSPGPSASQREHQALQDLVDLAGEAMNASPWPCSGGPASPGGVA
GMDLSLTGLPLTGFIPPPQEEQLERGRQASLTLSLLLADFRAMVNNPQLSDIQLQTDSGE
VLYAHKFVLYARCPLLMQYVNSEGFFAVEDGGVKSQRALLGGVSAEAARALLHYLYTADP
GVPPRLAPGLSALARRFGVSELVLLCEQEPDVMGSEDRPRKEKEDEDCESRAENFQELLR
SMWIKEEEEAEASLKSEGCEEDREKVDEAEMEEIYEFAATQRKLLRGESTPEVKEETDRF
GEDGPLSAQISLSVQVHEQPENAEETELCGQRRDEAPVKWKSVGPSTPLRLKGHGADVET
AGSPEEALGHPGSSRPSRGGRTGRKEDAFWCSAAAATEQPFSSTPRRCPEPSQTTSELQE
DNGTAARKGAESPCTPAHRQAPPLRPCLSKLLQGRSPDRPRPCPRPHHTGQSPSGASRAA
SQDSPSKQRRGRSLCKLLKDPGLQKGKERGSLLECRNKGALASPEKSPSIDLTQSKPGHL
SSRSQNTPASKNREDEIILLLDSDEELELEQTKTKSVLNGPLEERKVLEVSTKSSELFSV
IDVDADQDSFQSPPRREAELLCGEERPPGSQGSGEGRGTPQLFCDPESGPEEDSTTDASW
LVPATPLASRSRDSSSQTQITGLRSRALVDHMAQFKPWASLENRDRPEAANTCSIARPQM
SPPRLGPIVAGSPDSRGPCSPHPGHLQHLAPLAACPISGGLADSTGRLRKRSPLGPSLPN
QATASEVVEVEDSEDEREVANSSPLPDNDPPIPLDDCHWHTEPLSPIPIDRLNLELTGPL
STSSPSGYGRSPALSGTTPIRGSLAGQRKAPEKSPRAGSPGSSRQSFLNSALWDHWDEKE
QTSPELLPAAQTPSADEAQKSEGLETPKGAHWKNLPPKVPITPMPRYSIMETPVLKKELD
RFGVRPLPKRQMVLKLKEIFQYTHQTLESDSENESQSSRVLLEAPHSQTQASKTSKGSSH
QENPPGGSLPPTSREEPPGPDGDAQLPASQESVASSVDSSDGSFNSQSSSCEFGVAFESA
GDEEGQEEISASQTAVQAAATEEAVRRYIRSRPALYRKVLLYQPFELAELQAELKQHGIR
MALGKLLDFLDAHCITFTTSAARKEKLQRKRRQPVGKKKRGRAAGRSAPPHPRPSAACER
LQPPSASQASTGVSGPGDHINPP
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggtggcagtggagagggtccacttggataaaggaatacttgagagccttaaagttggt
cagatgatggatgagtcagacgatgagtttaaggagctctgcgccacctttctccaaagg
gtgaaaaagaatggcaccaaggaagtgtcgggggaaaggaagacacaaaaggcctcaaac
agcactgagacaagtaaaccgaaaaggaccaaaccaactgctaccaagagcaaaaccctt
caaggccccagggagaagaaaactcggtctggcagccaggccccgaggactagaaggcaa
ggggcacccaagtggcaggagagcaaaccagctcccccggagaatggagggggaggtgtg
cctgcctctgctgtgctccaggagaatgtgcagaacacccagacagaggacgctcgggac
agcgactcccagccccctccttcccatctgactgcgatggggcccagtccctccaaaccc
cggacggccgagctcgtcctgcagcggatgcagcagttcaagagagcagatcctgagcgc
ctgcagcatgcttccgaacggtgctccctggagtctgcagttgaagaaaacctcccgaag
ggccctcaagaggagatgacggcaggggacgggtcggggccctggctccctgccacagag
agtgacgcggcggtggccttggccctgcagcaggagtttgggcaggaacaagcatcgtta
cctgatgagaacctggaggagacagggttgttcttctgccagatctgtcaaaagaacctc
tcagccatgaacgtgacacggagggagcagcatgtgaaccggtgcttggatgaggctgaa
aaggcactggcacccaccacaccacggatccccgaatgcccgatttgcgggaggccgttt
ctcaccccgaagagcaggatcagtcacctgaaacagtgcgcggtgaacatggacgtgggc
ccccagctcctgctccaggccgtgcggctgcagacggttccgccggagggggcctgtggc
acactggcatcaagcttcagccatcacgctggaggtctgaagcggaggggagccaccaac
cagaaggagctgcagaggaagcggagggtcaccaagcccgaggcgccgtccgaggacttg
ctggtggccatggccttgtcccggtctgagatggagcaggaggctgtgccagcggcgctc
agcccgggaaatgccttttctgagaggataagactgggagcagaaaagaagagccgcaag
aggaaggcgcctatttcccctcccccgttgttagtccaggacccggagaccacggggagg
ctgacggcggatcgggtggcccagctctttgccgaggaggtggagctgtccagcacgccg
ccgcttcccacgagcaggattctaaaggaagagctgggaaaggccggtcggtgtctgcgg
ccacctggagggaagcagaactttctgtgggaaggcagcgccctgactggagcctgggcc
ctggaagccttctacacggcaagcctggtccctcccatggtgccccagcggcctgcaaag
gctcttacacaggagcccatgctcctcccagggctgcctgaccagccagaggtgggagtg
cagacgccacctgctgtccccagtgcccaccctgcaggccacggccccaggagcccgggc
ccctccgccagccagagggagcaccaggccctgcaggaccttgtggacctggcgggagag
gcgatgaatgccagcccatggccctgcagtgggggaccagccagcccgggaggggttgca
gggatggatttgtcactcactggccttccactgactgggtttatcccgccaccccaggaa
gagcagctggagaggggccgccaagcttcgctcaccctcagtttgctgctggctgacttc
agagccatggtcaataacccacagctgagcgacatccagcttcagacagacagcggggag
gtgctttacgcccacaagttcgtgctttacgcccgctgcccccttctcatgcagtatgtg
aacagcgaaggcttcttcgccgtggaggacggcggcgtgaagagccagcgcgcgctgctg
ggtggcgtgagcgccgaggctgcccgtgcgctcctgcactatctctacaccgcggacccc
ggcgtgcctccccggctggcgcccggcctgagcgctctggcccgcaggttcggcgttagc
gagcttgttctcctgtgcgaacaagagcccgatgtgatgggttcagaggacaggccacgg
aaggagaaggaagacgaggactgtgaaagccgggcggagaacttccaagaactcttgagg
tccatgtggataaaggaagaggaagaagcagaggcttcattgaaatccgagggctgtgaa
gaagacagagaaaaagtggatgaggcagaaatggaagagatttatgaatttgcagccact
cagcgcaagctgctccggggggaaagcactccagaggtcaaggaagaaacggaccggttc
ggggaggatggtcccttgtctgcacaaatctcattaagtgttcaggttcacgaacagccg
gaaaatgcagaagagacggaactgtgtggccagagaagagatgaggccccagtcaaatgg
aagagcgtgggaccgtccacgcccctgcgactcaagggccatggtgcagacgtagagaca
gcagggtccccagaggaagcactggggcatcccggctcctctcgcccttctcggggcggc
cggacagggagaaaggaagatgcgttttggtgctcggctgctgctgccactgaacagccc
ttttcatcgactcccagaagatgccctgaaccgtcgcagacaacaagtgagctccaggaa
gacaatggcacggccgcgagaaagggggcggagagtccttgtacccctgcccaccggcag
gcacccccgttgcgcccgtgcctgtcgaagctccttcaaggcaggagtcctgaccggcca
cgcccttgccctcgccctcatcacaccggccagtcgcccagcggagcttctagggcggcc
tcccaggactcaccatccaagcagaggaggggcaggagcctctgcaagctactcaaagat
ccaggccttcagaaaggcaaagaacgtggttccttgttggaatgcagaaataaaggggct
ctagcctccccagaaaaatctccatccattgaccttacccaatcaaaacctggtcatctg
agctcccgatctcagaatactccagccagcaagaacagagaagatgagattatcctttta
ctggactcagatgaagagctggagctggaacaaaccaaaacaaagtcagttcttaatggt
cccctggaagaaaggaaagtgctagaagttagcaccaagtcttctgagctgttttccgtc
atcgacgttgatgcagatcaggattctttccaaagcccaccacgaagagaggcggaactg
ctgtgtggggaggagaggccgccagggagccagggctcaggggagggcagagggacccct
cagctgttctgtgaccccgagagcggccctgaggaggacagcaccacagacgcctcatgg
ctggtgcccgccacccccctggccagcagaagccgtgactcttcatcccagacccaaata
acaggcctcaggtccagggctttagtggatcacatggcccagttcaaaccctgggcctcc
ctagaaaacagggatagacccgaagctgcaaatacgtgttcgatagccaggccccagatg
tcgccaccgcgcttgggccccatcgttgcaggaagccccgacagcaggggcccatgcagt
ccccaccccgggcacctccagcaccttgctcctctggcggcctgtcccatctcagggggc
ctcgccgattccacggggcggctccggaagcgctcgcccctcgggcccagcctgccgaat
caggccaccgcgagtgaggtggtggaggtggaggacagcgaagacgagcgggaggtggcc
aacagcagccccctgccggacaacgaccctccgatccctcttgacgactgccactggcac
acggagcccctctctccgattccgatcgaccgcttgaatctcgagctgacggggcccctg
agcaccagtagtcccagcggttacggccgctccccggccctctcgggcaccacccccatc
cgaggaagccttgccggccaaagaaaggctccagagaagtcccctcgggccggctcgcct
gggagcagcaggcagagctttctgaactccgctctgtgggaccactgggatgaaaaggaa
cagacgtctccagagctccttcctgcggcccagacgccgagtgctgatgaagctcagaaa
tcagaagggttagagacgccaaaaggtgctcattggaagaacttgcccccgaaagtgccc
ataaccccaatgccaaggtattccatcatggagaccccggtactgaagaaagaactggat
aggtttggcgtccgccctctacccaaacgccagatggtcctgaaactgaaggagatattc
cagtacactcaccagactctggagtcagactccgagaatgagagccagtcctcacgggtg
ctcctggaggcgcctcacagccagacccaagccagcaagacgtccaagggctcctcccat
caagagaatcctcctggtggaagcctccctccaacgagcagggaggaacctccaggccct
gatggtgacgcccagctcccagcctcccaggaatcagtggcctcctccgtggacagcagt
gacggctcctttaactcacaaagttcttcctgtgagtttggagtggcctttgagtctgcg
ggggatgaagagggtcaagaggagataagtgcatcacagacggccgtccaggcggcagcc
acggaggaggcggtgaggcgctacatccgctcccggccggccctctaccgcaaggtcctg
ctctatcagccctttgagttggccgagctgcaggccgagctgaagcagcatggcatccgc
atggccctggggaagctgctggatttcctggatgcccactgtatcaccttcaccacctct
gcggcccggaaggagaagctccagaggaagaggcggcagcccgtgggcaagaagaagcgg
ggcagggccgcgggccggtccgcccctccccacccgcggccgtccgcagcctgtgagcgt
ctgcagcccccctcggcgagccaggcctccacgggcgtttcggggcctggggaccacatc
aaccccccgtga
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integrated database retrieval system
