Panthera leo (lion): 122210068
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Entry
122210068 CDS
T10741
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
plez Panthera leo (lion)
Pathway
plez03430
Mismatch repair
plez03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122210068 (PMS2)
03460 Fanconi anemia pathway
122210068 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plez03400
]
122210068 (PMS2)
DNA repair and recombination proteins [BR:
plez03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122210068 (PMS2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
122210068
NCBI-ProteinID:
XP_042778439
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All DBs
Position
E3:5103018..5130452
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AA seq
901 aa
AA seq
DB search
MNVLDTLTINRDESFPAVKTRMKIHKCMLALFLVTGVFSTELAKAIKPIDRRSVHQICSG
QVVLSLSTAVKELVENSVDAGATNIDLRLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHT
SKIQDFGDLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTRLAFDHNGKIVQKTPH
PRPRGTTVSVQQLFYTLPVRHKEFQRNIKKEYARMVQVLQAYCIIAAGIRVSCSNQVGQG
KRQPVVCTSGSSSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLSHGDALQTLFRI
SGFISHCAHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHMYNRHQYPFVVLNISVDS
ECVDVNVTPDKRQILLQEEKLLLAVLKTSLIGMFDGDLNKLNVSQQPLLGIEGNLIKKHS
AEMEKPVPEKQDDPASLRTGGEAKRAVTISRLRETFSLRHTTETKSQGPSTTEPRRISPR
QKRHVQCSGAPDSPCFQKCASGTGSSGPGGEAMRVRGGPCDRRDGAEMEQDSGHSRTSAG
PREGPGTPATGGQSGGTCAANSPEDRFSQGNEEASEKLPELDRRSADTERGSDHEDGGRK
HRVSPPPVDASSPSTRRFKKDSIPLNPDLPQGLVTAQNTSASQVDVAVKISKKVVPLAFS
MRSLAARIKQLRHRERPQEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFADMEIIGQ
FNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTALQGQRLIAPQTLNLTAVNEAILIE
NLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMCRPS
RVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDFISQ
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgttagatacattgactattaacagagatgaatcatttcccgcagttaaaacc
aggatgaaaatacataaatgcatgcttgctttgtttcttgtaactggtgtctttagtaca
gaacttgctaaggccatcaagcctatcgatcggaggtcagtccatcagatttgttctgga
caagtagtactgagtctaagtactgctgtgaaggagttggtagaaaatagtgtggatgcc
ggtgccactaatattgatctaaggctcaaagactatggggtggatctcattgaagtttca
gacaatggatgtggggtagaagaagaaaactttgaaggcttaactctgaaacatcacact
tctaagattcaagactttggtgacctaactcaggttgaaacttttggctttcggggggaa
gctctgagttcactttgtgcactgagcgatgtgactatttctacctgccacgcatccgcg
aaggtcgggactcggcttgcgtttgatcacaatgggaagatcgtccagaaaaccccccac
ccacgacccagagggacaacggtcagtgtgcagcagctgttttatacactccctgtgcgc
cataaggagtttcaaaggaatattaaaaaggagtatgccagaatggtccaggtcttacaa
gcatactgtatcattgcagcaggcatccgtgtaagttgcagcaatcaggttggacaagga
aaacgccagcctgtggtttgcacaagcggaagctccagcataaaggaaaatattggatct
gtgtttgggcagaaacagctgcaaagcctcattccttttgttcagctgccccctagtgac
tctgtgtgtgaagagtacgggctgagccacggtgatgctttgcagactctgtttcgcatc
tctggtttcatttctcactgtgctcatggtgttggaagaagctcaacagacagacagttt
ttctttatcaatcggcggccttgtgacccggcaaaggtttccagacttgtgaatgaggtc
tatcatatgtataatcgccatcagtatccatttgttgttcttaacatttctgttgattca
gaatgtgttgacgtcaatgttactcccgataaaaggcaaattttactgcaagaggagaag
cttttgttggcagttttaaaaacatctttgataggaatgtttgatggtgatctcaacaaa
cttaatgtcagtcagcagccgttgttgggtattgaaggtaacttaataaaaaagcattcg
gcagaaatggagaagcctgtgccagaaaaacaggatgatcctgcttcgttaaggactgga
ggagaagcgaagagggcagtgaccatttccagactgagagagaccttttctcttcggcac
acgacagagaccaagtctcagggcccgagcaccaccgaaccgagacggatttctccaaga
cagaagagacacgtccagtgttctggagctccagactccccgtgtttccagaagtgcgcc
tcgggcacaggctcgtccggccctggcggggaggcgatgcgtgtgcgcgggggcccctgt
gaccgcagggatggagcggagatggagcaggactcggggcacagccgcacttcggccggc
ccgcgggaagggcccggcaccccagcaacgggcggtcagtccggtggcacctgtgcagca
aactcccctgaggacaggttttcacagggaaacgaggaagcttctgagaagttgcctgaa
cttgaccgtcgctctgcagacacggagcgcggttccgatcacgaggacggtggacgtaaa
catagggtctcgcctccgcccgtagatgcatcctccccaagcacacggcgtttcaaaaaa
gacagcattcctttgaatcctgacctccctcaagggttggtgactgcgcagaacacatca
gcgtctcaggtggacgtggctgttaaaatcagtaagaaagtagtgcccctggccttttcc
atgcggtctttagcggcacgaataaagcagttacgtcaccgagaaaggccacaagaaggc
gaacagaattacaggaagttcagggcaaagatctgccccggagaaaaccaagccgcggaa
gatgaactgagaaaggagataagtaaaacgatgtttgcagacatggagatcattggtcag
tttaacttgggatttataatcaccaaactcaatgcagatatcttcatagtggaccagcat
gccacggatgagaagtacaactttgagatgctccagcagcacacggccctccagggtcaa
aggcttatcgcaccccagactctcaacttaactgctgtcaatgaagctatcctaatagaa
aatctggaaatattcagaaagaatggcttcgattttgttatcgacgaaggggctccagtc
actgaaagggcgaagttgatttccttaccaaccagtaaaaactggacctttggacctcag
gacatcgatgaactgatcttcatgctcagtgacagccctggggtcatgtgtcggccttcc
cgcgtcagacagatgtttgcctccagagcctgtcgaaagtctgtgatgattggaaccgcc
ctaaacacaagtgagatgaagaaactgatcacccacatgggtgagatggaccatccctgg
aactgtccccacggaaggccgaccatgagacacattgccaacctggatttcatttctcaa
aagtga
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