Panthera leo (lion): 122214285
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Entry
122214285 CDS
T10741
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
plez Panthera leo (lion)
Pathway
plez03082
ATP-dependent chromatin remodeling
plez04714
Thermogenesis
plez05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122214285 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
122214285 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
122214285 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plez03021
]
122214285 (SMARCC1)
03036 Chromosome and associated proteins [BR:
plez03036
]
122214285 (SMARCC1)
Transcription machinery [BR:
plez03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122214285 (SMARCC1)
Chromosome and associated proteins [BR:
plez03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122214285 (SMARCC1)
PBAF complex
122214285 (SMARCC1)
GBAF(ncBAF) complex
122214285 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
122214285
NCBI-ProteinID:
XP_042785137
UniProt:
A0A8C8X6U3
LinkDB
All DBs
Position
A2:complement(16834719..17037701)
Genome browser
AA seq
1105 aa
AA seq
DB search
MAAAAGGGGLGAAAGAAGAGGAAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPSIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEVEDPPIPEKPWKVHARWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDEDPSKGDQSRSLDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGTEEEK
METDTDVQQPEKAENKGENETDEGDKAQDGENEKHSEKEQDSEVSEDTKSEEKETEENKE
LTDTCKERESDLGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMIPGQPMPGRMIPTVAANIHPPGSGPAPPGMPPMPGNILGPRVPLTAPNGMYAPPPQQ
PPPPPPPTDGVPPPPAPGPPASAAP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcggcggcgggctgggggcggcggcgggcgccgcgggcgcggga
ggcgcggcggcggctgcgggcctggccgtttatcggcggaaggacggtggcccggccagc
aagttttgggaaagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcacgcagatgctcctaccaacaaaactctggctgggcta
gtggtacagcttctccaattccaggaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaaacttccagcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaagtataaaaatgaacagggatggcgtaggtttgatctacag
aatccatctcgaatggatcgtaacgttgaaatgtttatgaatattgaaaaaacattggtg
cagagcaattgtctgaccagacccagcatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatatcatcaaacgacatcaggggacatttactgatgagaagtca
aaggcttcccaccacatttatccatatccttcctctcaagaggatgaagaatggttgaga
ccggtgatgagaaaagataagcaggtgttagtgcactgggggttttacccagacagctat
gatacttgggtccatagtaatgatgttgatgcagaagttgaagatcccccaattccagaa
aagccatggaaggttcatgcaagatggattttggatactgatgttttcaatgaatggatg
aatgaggaggattatgaggtggatgagaacaggaagcctgtgagttttcgtcagcgaatt
tcaacaaagaatgaagagccagtcagaagtccagagagaagagataggaaagcatcagct
aatgctcgaaagaggaaacattcgccttcccctccacctccaacacccacagaatcccgg
aagaaaagtggaaagaaaggccaagctagtctttatgggaagcgcagaagtcagaaagag
gaagatgagcaagaagatcttaccaaggacatggaagacccaacaccagtacccaacata
gaggaagtggtacttccaaaaaatgtgaacccaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtggcagatctagatgagcaggatgaagaaacagtcacaacaggagga
aaggaagacgaagatcctagcaaaggtgatcagagtcgttcacttgacccaggagaagat
aatgtgacagagcagaccaatcacattattattcctagttatgcatcatggtttgattat
aactgtattcacgtgattgaacggcgtgctcttcctgaatttttcaatgggaaaaacaaa
tccaagactccagaaatatacttggcatatcgaaattttatgattgacacatatcgccta
aacccccaagaatatttaaccagcactgcttgtcggcgaaacttgactggagatgtgtgt
gctgtgatgagggttcatgcctttttagagcagtgggggcttgtcaattatcaagtggat
ccagaaagtcgacccatggcaatgggacctcctcctactcctcatttcaatgtattagct
gataccccttctgggcttgtgcctctacatcttcgatcacctcaggtccctgctgctcag
cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt
cttcgtactgacatttactccaagaaaaccttagcaaagagtaaaggtgctagtgctgga
agagaatggactgaacaggagacccttctgctcctggaggccctggagatgtacaaggat
gattggaacaaagtgtcagagcatgtcggaagtcgtactcaggatgaatgcatcctccac
tttctgaggcttcctattgaggacccgtaccttgagaattcggatgcctccctggggccc
ctagcttaccagcctgtccctttcagtcagtcaggaaacccagtcatgagcactgttgct
tttttggcatccgtggtggacccgcgtgtggcatctgctgcagcaaaagcagctttggag
gagttttctcgggtccgagaggaggtaccactggaattggttgaagctcacgtcaagaaa
gtacaagaagcagctcgagcctctgggaaagtggaccccacgtatggcctggagagcagt
tgcattgcaggcacgggacctgatgagccagagaagcttgaagggactgaggaggaaaaa
atggaaacagataccgatgttcagcagcctgaaaaggcagaaaacaaaggggaaaacgaa
acagatgaaggtgataaagcacaagatggagaaaatgaaaaacatagtgagaaggagcag
gacagtgaagttagtgaggataccaaatcagaagaaaaggaaactgaagagaacaaggaa
ctcactgatacttgtaaagaaagagaaagcgatctcgggaagaagaaagtagaacatgaa
atttccgaaggaaatgtggccacggccgcagcagctgctcttgcttcagctgcaaccaaa
gccaagcacctggctgccgtggaagagagaaagatcaagtctctggtggccctgctggtt
gagacacaaatgaagaaattggagatcaaactgcgacattttgaggagctggaaactatc
atggacagagagaaagaggctttagaacaacagaggcagcagttgcttactgaacgccag
aacttccacatggaacagctgaaatacgctgaattgcgagcccgacagcaaatggaacag
cagcagcatgggcagaaccctcagcaggcacaccagcactcaggaggacctggcctggca
ccactcggagcagcggggcaccccggcatgatgcctcatcagcagcctcctccctaccct
ctcatgcaccaccagatgccaccacctcatccaccccagccaggtcagataccaggccca
ggttccatgatccctgggcagcccatgccaggccgcatgattcccaccgttgcagccaac
atccacccgcctgggagtggcccagctcctcccggtatgcctccaatgccaggaaacatc
ttaggaccccgggtacccctcacggcacctaacggcatgtatgcccctccgccgcagcag
ccgccaccgcctccgccgcccacggatggagtccctccgcctcctgctccaggcccacca
gcctcggccgccccctag
DBGET
integrated database retrieval system
