Panthera leo (lion): 122215019
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Entry
122215019 CDS
T10741
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
plez Panthera leo (lion)
Pathway
plez04151
PI3K-Akt signaling pathway
plez04510
Focal adhesion
plez04512
ECM-receptor interaction
plez04820
Cytoskeleton in muscle cells
plez04926
Relaxin signaling pathway
plez04933
AGE-RAGE signaling pathway in diabetic complications
plez04974
Protein digestion and absorption
plez05146
Amoebiasis
plez05165
Human papillomavirus infection
plez05200
Pathways in cancer
plez05222
Small cell lung cancer
Brite
Exosome [BR:
plez04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
122215019 (COL4A1)
Glycosaminoglycan binding proteins [BR:
plez00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122215019 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
122215019
NCBI-ProteinID:
XP_042786146
UniProt:
A0A8C8WNM6
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Position
A1:complement(79419019..79572935)
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AA seq
1669 aa
AA seq
DB search
MGPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGEPGPLGPPGLPGFTGNPGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGL
PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGS
PGFPGDAGYPGLPGREGFKGDKGEAGPPGPPGIVIGTGPLGEKGERGYPGSPGLRGEPGP
KGFPGLQGQPGPPGFPVPELAGAPGFPGERGQKGDQGFPGTSLPGPSGRDGLPGPPGPPG
PPGQPGHTNGIVECQPGPPGDRGAPGSPGQPGLTGEVGEKGQKGDSCLICDTAGLRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGVPGLMGQPGAKGEPGEIYFDARLK
GDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDI
GPPGPPGFGPIGPVGDKGQMGFPGNPGPPGQPGPKGEAGQVVPLPGPPGAQGLPGSPGFQ
GPQGDRGFPGTPGRPGLPGEKGAIGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG
LPGNPGVPGQKGEPGIGLPGLKGLPGLPGIPGTPGEKGNIGGPGVPGEHGVIGPPGLQGI
RGDPGPPGLQGPKGAPGVPGIGPPGAMGPPGGQGPPGSLGPPGLKGEKGFPGFPGLDMPG
PKGDKGSPGLPGLTGQSGLPGLPGQQGTPGLPGIPGPKGEMGVMGTPGQPGSPGPAGVPG
LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG
PTGDKGSRGDPGTPGMPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGVAGFPGSPGE
KGEKGSVGIPGIPGSPGPQGSPGSVGYPGSPGLPGDKGDRGLPGSAGIPGVKGEAGLPGK
PGPVGPAGQKGEPGSDGIPGSAGEKGEPGLPGRAFPGFPGAKGEKGSKGDVGFPGQAGSP
GIPGSKGEQGFMGPPGPQGQPGLPGAPGHAVEGPKGDRGAQGQPGLPGLPGPMGPPGLPG
LDGLKGDKGNPGWPGAPGAPGPKGDPGFQGLPGIGGSPGLTGSKGDIGPPGVPGFQGQKG
LPGLQGAKGDPGDQGFPGSKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLPGPPGPK
GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcggcgtctggctgctgctgctgcccgccgccctcctgctccacgag
gagcgcagccgggccgctgcgaagggcggttgtgctggctctggctgcgggaagtgtgac
tgccatggagtgaagggacagaagggcgaaagaggcctcccgggcttgcagggtgtcatt
gggttccccgggatgcaaggaccggaggggccgcaggggcccccgggacagaagggtgac
actggagaacccggactgcctggaacaaagggcacaaggggacccccaggagcatcaggt
tacccaggaaacccaggacttcctggtattcccggccaagatggcccccccggtcctcca
ggtatcccaggatgcaatggaacaaagggcgagccagggcctctggggcctccaggtttg
cctggattcactggaaatcccggaccaccagggttaccaggaatgaagggggatccaggt
gaaataattggccacgtgcctgggaccctgttgaaaggcgaaagaggatttcccggactc
ccaggagcaccaggctcgccgggactgccagggctgcaaggtcctgtcggccccccggga
tttaccggaccaccaggccctccaggtcctcctggccctccaggtgaaaaggggcaaatg
ggcttaagtttccaaggcccaaagggcgacaagggtgaccaaggggtcagtgggcccccg
ggggttccaggacaagctcaggttcaagaaaaaggagactttgccactaaaggagagaag
ggtcagaaaggtgaacctggatttcagggaatgccaggggttggagagaaaggggagccc
ggaaagccagggccccgaggaaaacctggcaaagatggtgaaaaaggagaaaaagggagt
ccagggttcccgggtgacgcagggtacccaggactccctggacgagaaggtttcaaggga
gacaaaggtgaagcaggtcccccaggcccacctggaatcgtgatcggcacgggacccttg
ggagaaaaaggagagcgggggtacccagggtctccagggttgagaggagagccaggcccc
aaaggtttcccaggattacaaggccagccaggccctccgggcttcccggtaccagagctg
gcaggtgctcctggctttcccggtgaaagagggcagaaaggtgaccaagggtttccaggc
acatctttgccgggaccaagtggaagggacgggctcccgggtccccccgggcctcctggg
ccccctggacagccgggtcacacaaatggaattgtggagtgccagcctggaccaccaggg
gaccgaggtgcccccggaagtccggggcaaccagggctgacgggcgaagtcggagaaaaa
ggtcagaaaggagacagttgcctcatctgtgacacagcaggacttcgtgggccccctgga
ccacagggacccccaggagaaataggtttcccgggacagccaggggccaagggtgacaga
ggcttacccggcagagatggcctggaaggactgcctggaccgcaaggtgtgccagggctg
atgggccagcccggagccaagggagagcctggcgagatttacttcgacgcacggctcaaa
ggagacaaaggggacccgggcttcccaggccagcccgggatgccgggcagagcaggcact
ccggggagagacggccacccgggtctgcccggccccaaaggctccccgggttcagtaggg
ttgaaaggagagcgtggcccccccggaggagttggattccctggcagtcgtggcgacatc
ggccctcctgggcctccagggtttggccccatcggccccgttggtgacaaaggacaaatg
ggttttccagggaaccctggacccccaggccagccaggtcccaagggtgaagctggacaa
gttgtgcccctacctggtccccccggagcacaaggacttccggggtccccgggtttccaa
ggaccccaaggtgaccgaggttttcctgggacgccgggaaggccaggcctcccgggagag
aagggtgccattggccagcccggaatcggatttccagggcctcctggccccaaaggtgtc
gatggcctgcctggagacgtgggacctcccgggagcccaggccgcccaggatttaacggc
ttgcctggcaacccgggtgtgcccggccaaaagggagagcctggcatcggtctgcctgga
ctcaaagggttgcccggtcttcccggcatccctggcacacctggggagaagggaaacatc
gggggaccgggcgttccgggagagcatggtgttatcggccccccaggcctccagggaatc
agaggtgacccaggaccacctggattacaaggtcccaagggagcccctggagttcccggg
ataggcccacctggagcgatgggcccccctggaggacagggaccaccagggtccttaggc
cctcctggactgaagggagagaagggcttccccggatttccaggccttgacatgccgggc
ccgaaaggagacaaagggtccccagggctgcccggcctgacagggcagtctgggctcccc
ggtcttcccggacagcagggcacgcctggccttcccggcattccaggtcccaagggagag
atgggtgtcatggggaccccggggcagcccggctcgccaggcccggcaggagtgccagga
ttgcccggagaaaaaggggaccacggcttcccgggctcctcggggcccaggggagacccc
ggcttcaagggtgacaaaggagatgtgggtctccctggcaagcctgggtccatggataag
gtggacatgggcagcatgaagggtcagaagggagaccaaggagaaaaaggacaaattgga
ccaactggtgataaaggatcccggggagaccctggaaccccgggaatgccgggaaaggat
ggccaggcagggcatcccgggcagccaggacctaaaggtgaccccggcattggcgggacc
ccgggggctccagggctccctggacccaaaggatcggttggtggaatgggcctgccagga
acacccggagaaaaaggcgtgcctgggatccctggcccgcagggcgtccctggcttaccc
ggggagaaaggcgcaaagggcgagaaagggcaggcaggcctccctggcattgggattccg
ggccggcctggcgacaagggagatcaaggggttgcaggatttccgggaagtcctggagag
aagggagagaaaggaagcgtggggatcccggggatccctggctctcctggcccccaagga
tcccctgggagcgttggctatccaggaagccctggcttgcctggggataaaggggacaga
ggcctcccaggatcggctggcattcccggtgtcaagggagaagcaggtcttcctgggaag
cctggccccgtgggcccagctggccagaaaggggagcctggcagtgacggaatcccaggg
tcggcgggagagaagggggaaccaggcctgcctggaagagcattcccagggttcccaggg
gccaaaggagagaaaggttcaaagggtgatgtgggtttcccgggacaagctgggagtcca
ggaattcccggatccaaaggagagcaaggattcatgggtcccccggggccacaaggacag
ccgggcttacccggagctccgggccacgctgtggagggacctaaaggagaccggggcgca
cagggtcagcctggcctgccagggcttccgggacccatggggcctccggggctccccggg
cttgatggactgaaaggtgacaaaggaaacccaggctggccgggggctcccggtgctcca
ggacccaagggagatccaggattccagggcctgcctggaatcggtggctctccaggactc
acaggctctaagggtgacataggacctccgggagttccaggatttcaaggtcagaaaggc
ctccccggcctgcagggagctaagggcgatccgggtgaccagggcttccctggaagcaaa
ggcctccctgggcccccaggccccccagggccctacgacatcatcaaaggagagccagga
ctccctggtccagagggtcccccaggtctgaaggggcttccgggaccaccaggccccaaa
ggacagcaaggtgtgacaggatccgtgggcttgcctggacctccaggtgttcccggtttt
gacggtgctcctggccagaaaggagagacgggaccctttggcccccctggtccaagaggg
tttccaggcccaccaggtcccgacgggttgccaggatcaatgggtcccccaggcacccca
tctgttgatcatggcttcctggtgacccggcacagtcagaccacggacgacccgcagtgt
cctcctgggaccaaaattctttaccacgggtactccctgctctacgtgcaaggcaacgag
cgggcgcacggccaggacttgggcacggctgggagctgcctgcgcaagttcagcacgatg
cccttcctgttctgtaacatcaacaacgtgtgtaacttcgcctcccgaaatgactactcc
tactggctgtccacccctgagcccatgcccatgtctatggcgcccatcgccggtgacaat
atcagaccgttcattagcaggtgtgcggtgtgcgaggctccggccatggtgatggccgtg
cacagccagaccatccagattccgcagtgccccagcggctggtcctccctctggattggc
tattccttcgtgatgcacaccagtgctggtgccgaaggttctggccaagccctggcatcc
cccgggtcctgtctggaagagttcaggagcgcgccattcatcgagtgccacggacgtggg
acttgcaattactacgcgaacgcgtacagcttttggcttgccacgatcgagagaagcgag
atgttcaagaagcccacgccgtccaccttgaaggcgggggagctgcgcacacacgtcagc
cgttgccaagtctgtatgagaagaacataa
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