Panthera leo (lion): 122216433
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Entry
122216433 CDS
T10741
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
plez Panthera leo (lion)
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plez03041
]
122216433 (YTHDC2)
Enzymes [BR:
plez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122216433 (YTHDC2)
Spliceosome [BR:
plez03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122216433 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
Helicase_C
R3H
DEAD
Ank_2
AAA_19
HA2_N
nSTAND3
AAA_22
Ank
ATPase
PhoH
AAA_7
AAA_16
UvrD-helicase
AAA_29
T2SSE
ABC_tran
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
122216433
NCBI-ProteinID:
XP_042789212
UniProt:
A0A8C9CVY2
LinkDB
All DBs
Position
A1:92285993..92382327
Genome browser
AA seq
1428 aa
AA seq
DB search
MSRPSSVSPRPPAPGGGGGPAPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGDQR
EMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLTHN
TKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKRG
ESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCR
IFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMA
GDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGS
CPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTF
KPESQRQRTVPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDV
DAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANVHSKASNGWM
ALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVHTNGSDLSAEDRELLKAYHHSFDDE
KVDLDLIMHLLYNICHGCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLH
SNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTM
LKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKL
LAPVNCPIADFLMKAPEPPPALIVRNAVHMLKTIDAMDAWEDLTELGYHLADLPVEPHLG
KMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLR
AFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVN
TNSENWAVVKAALVAGMYPNVVHVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANG
QAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRA
DGVPNDSSDSEMEDRTTANLAALKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAPS
KPWSQVDEATIRAIIAVLSTEEQCAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRKTS
ADTEFSDESATAERVLMKSPSPALYPPQKYKDRGILHPKRSTDDRSDQSSVKSTDSSSYP
SPCASPSPPPSGKGSKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNR
AFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWVRKESLPFQ
FAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPSGEKTTTD
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccgagcagcgtctccccgcggccgcccgcgcctggcggcgggggcggcccc
gctccgtgcggtcctgggggcggaggccgggcaaaggggctgaaggacattcgtatagac
gaggaggtgaagatcgcagtcaatatcgctctggagcgcttccgctacggggaccagaga
gaaatggaatttccttcctctttgaccagtactgaaagagcctttattcatcgattgagt
cagtctcttggtttggtttctaaaagtaaaggaaagggagcaaatagatacctaactgtg
aagaagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgactcataat
acaaaacatgctgttaggagcctaattcaaagatttcctgtcaccaataaagagcgtact
gaacttctgcctaaaacagaaagaggaaatgtgtttgcagttgaagctgaaaaccgggaa
atgagcaaaacgagtgggcgactcaacaatggcatacctcagattccagtgaaaagagga
gaatctgaatttgattctttcaggcagtctctgccagtgtttgagaaacaagaagaaatt
gttaaaataattaaagaaaataaagtagttttgatcgtaggagaaactgggtctggaaag
actacacagattcctcagttccttttagatgattgctttaaaaatggtatcccctgccgt
atattttgtacccagccaagaaggttagcagctattgctgtggctgaaagagttgctgca
gagagaagagaaaggattggtcaaacgattggatatcagatccgattagaaagcagggtt
tctccaaagacacttctgacattttgcactaatggggtattgcttcgtacattgatggcg
ggagatagtacattgtcgactgtgacacatgttattgtggacgaagtacatgaaagggat
cgatttagtgattttttacttacaaagttaagagatctgttgcaaaagcacccaactttg
aaacttattctttctagtgccgccttggatgtaaatctttttataagatattttggaagt
tgtccagtgatctatatacagggaagaccttttgaagtaaaagaaatgtttctggaagac
atcttaagaactactggatacacaaacaaagaaatgttaaaatacaaaaaggaaaaacaa
cgagaagagaagcaacaaactactcttacagaatggtattcggctcaagagaatacattc
aagcctgaatctcagaggcagagaactgttccgaatgtgactgaagagtatgatttgttg
gatgatggtggtgatgctgtcttcagccagttgacagaaaaagatgtgaattgccttgaa
ccatggttaataaaggaaatggatgcttgtctttctgacatatggctacataaagatgtc
gatgccttcgctcaggtctttcaccttattttaactgaaaatgttagcgttgattatagg
catagcgaaaccagtgcaacagctctgatggttgctgctggacgaggtttttcaagtcaa
gtagagcagttaattagcatgggagccaacgtgcacagtaaagcatcaaatggctggatg
gctttagattgggctaaacactttggacagactgaaattgtggatcttctggaatcttac
agtgcttcactggaatttggaaatctagatgaaagttctctggtacacacaaatgggagt
gacctcagtgcagaagacagagagctcctgaaagcttatcatcacagttttgatgatgaa
aaagtagacttggatttgatcatgcaccttctatacaatatctgccatggttgcgatgct
ggagcaatattaattttcctgcctggatatgatgaaattgttggactgcgggatcgcatc
ctgtttgatgacaagcggtttgctgataacacacacagatatcaagtctttatgcttcat
tcaaatatgcaaacatctgatcaaaagaaggtattgaaaaacccgcctgctggtgttcga
aaaattatcctttccaccaatattgctgaaaccagcatcacagtcaatgatgttgtcttt
gttattgattctggtaaggtgaaagagaaatccttcgatgcactgaattttgttacaatg
ttaaaaatggtgtggatttccaaagctagtgccatacaacgaaaaggcagggcagggaga
tgtagacctggaatttgtttccggctgttcagcagactccgattccagaatatgttggaa
tttcagactccagaacttttgagaatgccattacaggaactttgtttacatactaagcta
ttagccccagttaattgtcctattgccgatttcctaatgaaagctcctgaacctccacct
gctttaattgtaagaaatgctgtacacatgcttaagacaatagatgcaatggacgcgtgg
gaagatctcactgagcttgggtatcatttggctgacctgcccgtagaaccacatcttgga
aaaatggtcctgtgtgctgtcgtgttaaagtgtctggaccccatccttacaattgcctgc
accctggcctatcgagacccttttgtactgccaacccaggcctctcaaaagcgcgcagct
atgctctgtaggaaacgcttcactgcaggaactttcagtgaccacatggcacttctcaga
gcattccaggcatggcagaaagcacgaagtgatgggtgggagcgagccttttgcgaaaag
aattttctttcgcaagctaccatggaaataatcattggtatgagaactcagttgcttggt
cagcttagagcatcaggttttgttagagcacgaggcggtggtgacattcgagatgttaac
acaaattccgagaactgggctgtcgttaaagctgcattggtggcaggcatgtatcctaat
gtagtccatgtggacagagagaatgtagtactgacagggccaaaggagaaaaaagttcgg
tttcatcccacttcagttctcagtcagcctcagtataaaaagattcctccagccaatggt
caggctgcagcgattcaagcactacctacagattggcttatttatgatgaaatgaccagg
gcccatagaatagctaatattcgatgttgttcagcagtgacacccgtcactatattggta
ttttgtggaccagctagattggcaagtaacgctcttcaagaaccttcatcatttcgagcg
gatggtgttcctaatgacagtagtgatagtgaaatggaggacagaaccactgctaatttg
gcagctttgaaacttgatgagtggctcaatttcaaactagagcctgaggcagccagttta
ttgctgcagctcagacagaagtggcacagcttatttttacgccgaatgagagctccatcc
aaaccttggtctcaagttgatgaagctaccataagagcaattatagctgttttaagcact
gaggaacagtgtgcaggtttacagcagccgtctgggataggccagaggccaaggcctatg
tcttcagaagaacttcctttggcatcatcttggaggtccaataatagcaggaaaacttcc
gcagatactgaattttctgatgagtctgctactgcagaaagagtattgatgaaatctcca
tctccagcactatacccacctcagaagtacaaagatagaggaattttacatcctaaacga
agcactgatgaccgatcagatcaatcttctgtgaaatctacagacagcagtagttacccg
agtccttgtgccagcccttctcctccaccctcaggaaagggctcaaaatctccttcacca
agaccaaacatgcctattcgatacttcataatgaagagtagcaatttgagaaaccttgaa
atttctcagcagaagggtatctggtctacaacccctagtaatgagcggaagctaaatcga
gccttttgggaaagcagcatggtttacttggtattttctgttcaaggatctggacatttc
cagggattttctaggatgtcttcggagataggaagggagaagagccaggactggggctcc
gctggactgggaggagtgtttaaggtggagtgggtccggaaggagagtcttcccttccag
tttgcacaccatctacttaacccctggaacgacaacaagaaggtccagatcagcagagac
gggcaggagctcgagcctcaggttggtgaacagttgctccagttatgggaacgccttccg
tcgggagaaaaaaccacgactgattga
DBGET
integrated database retrieval system
